Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002352)

(Analysis AN004097)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
299.2813@1.17, provisional ID = SPB 18:1;O2	ME594866	0.66	0.46	1.81	1.85	0.62	0.60
Bilirubin	ME594827	0.28	0.25	2.81	1.91	0.36	0.39
CAR 18:0	ME594882	0.26	0.38	2.47	2.30	0.32	0.27
PC 34:2	ME594868	0.37	0.30	2.30	2.17	0.49	0.38
PC 36:2	ME594869	0.40	0.33	2.24	2.10	0.53	0.41
PC 36:4	ME594870	0.40	0.32	2.25	2.10	0.52	0.40
CAR 16:1;O	ME594810	0.01	0.01	3.62	2.32	0.04	0.01
CAR 12:0	ME594838	0.02	0.02	3.40	2.53	0.02	0.02
CAR 14:1	ME594885	0.03	0.07	3.16	2.69	0.01	0.04
538.3788@7.87, provisional ID = PC O-20:0	ME594829	0.01	0.01	3.23	2.73	0.01	0.01
CAR 18:3	ME594850	0.00	0.00	3.22	2.77	0.00	0.00
SM 36:1;O2	ME594881	0.06	0.04	2.84	2.81	0.19	0.07
SM 36:2;O2	ME594879	0.01	0.01	3.03	2.92	0.01	0.01
SM d34:0	ME594877	0.01	0.01	3.00	2.98	0.01	0.01
CAR 16:1	ME594842	0.14	0.17	2.81	2.50	0.21	0.17
CAR 18:2	ME594851	0.16	0.14	2.79	2.54	0.21	0.16
LPC 18:1	ME594856	0.21	0.19	2.69	2.41	0.29	0.22
CAR 18:1	ME594864	0.18	0.18	2.76	2.43	0.25	0.19
LPC 16:0	ME594853	0.19	0.17	2.71	2.48	0.25	0.21
LPC 16:1	ME594854	0.15	0.10	2.93	2.45	0.23	0.14
LPC 18:2	ME594857	0.20	0.16	2.84	2.34	0.27	0.19
PC O-36:4	ME594824	0.17	0.09	2.61	2.53	0.36	0.24
SM d34:1	ME594878	0.21	0.14	2.58	2.49	0.34	0.23
CAR 16:0	ME594867	0.25	0.24	2.50	2.42	0.32	0.26
LPC 18:0	ME594855	0.25	0.21	2.61	2.33	0.35	0.25
CAR 16:0;O	ME594812	0.13	0.27	3.18	2.31	0.05	0.06
LPC 18:3	ME594858	0.08	0.23	3.04	2.35	0.16	0.15
441.355@7.97, provisional ID = CAR 18:1-0H	ME594811	0.01	0.30	3.06	2.60	0.02	0.02
LPE 18:2	ME594859	0.09	0.44	2.82	2.49	0.03	0.14
Cytidine	ME594835	0.61	1.86	0.26	0.77	1.09	1.41
526.4679@1.14, provisional ID = DG(29:0)	ME594837	0.69	0.68	0.86	0.84	1.32	1.60
Histamine	ME594844	0.75	1.06	0.67	0.68	1.50	1.34
Adenosine	ME594821	1.01	0.88	1.01	1.04	1.28	0.76
Succinylaminoimidazole carboxamide riboside	ME594876	1.01	1.16	0.71	0.63	1.33	1.15
Succinoadenosine	ME594883	1.15	1.13	0.58	0.65	1.24	1.27
1-Methyladenosine	ME594806	1.09	1.14	0.61	0.71	1.23	1.22
Hypotaurine	ME594847	1.10	1.15	0.66	0.70	1.22	1.17
CAR 5:0	ME594890	1.07	0.81	0.82	0.96	1.17	1.17
367.2674@7.75, provisional ID = CAR 14:2	ME594813	0.93	1.14	0.94	0.93	0.86	1.19
Arginine	ME594825	1.12	0.92	1.08	1.03	0.89	0.96
L-Monomethylarginine	ME594849	1.06	1.01	0.93	0.92	1.05	1.03
4-Imidazoleacetic Acid	ME594816	1.02	0.95	0.95	1.05	1.04	0.98
3-Methylhistamine	ME594808	0.96	0.98	0.98	0.99	1.04	1.05
Citrulline	ME594832	1.00	0.95	1.02	1.02	1.01	1.00
Tyramine	ME594888	1.00	0.97	1.04	1.01	0.98	1.01
3-Methylhistidine	ME594809	1.05	1.08	0.89	0.72	1.16	1.10
Histidine	ME594845	1.05	1.14	0.84	0.70	1.12	1.15
S-Adenosylmethionine	ME594875	0.97	1.18	0.69	0.86	1.14	1.17
4-Aminobutyric Acid	ME594814	1.10	1.17	0.77	0.96	1.00	1.00
Urea	ME594889	0.95	1.04	0.77	0.90	1.20	1.15
Guanidinosuccinic Acid	ME594839	1.01	1.07	0.78	0.94	1.11	1.09
CAR 6:0	ME594843	1.02	1.08	0.80	0.92	1.08	1.10
Inosine	ME594848	1.01	1.08	0.80	0.92	1.08	1.12
Creatinine	ME594834	1.01	1.09	0.81	0.95	1.05	1.09
5-Aminopentanoic Acid	ME594817	1.00	1.08	0.81	0.94	1.08	1.10
Trimethyllysine	ME594887	0.99	1.09	0.81	0.94	1.08	1.08
Thiamine	ME594886	0.97	1.11	0.75	0.94	1.10	1.13
Glycerophosphocholine	ME594880	1.01	1.07	0.78	0.91	1.10	1.13
Phosphocholine	ME594871	1.00	1.07	0.78	0.90	1.09	1.14
CAR 4:1;O2	ME594860	1.02	1.10	0.77	0.90	1.10	1.12
CAR 2:0	ME594819	1.00	1.10	0.76	0.90	1.09	1.14
CAR 4:0	ME594828	1.00	1.10	0.76	0.91	1.08	1.14
CAR 3:0	ME594874	1.00	1.09	0.78	0.92	1.08	1.14
Deoxycarnitine	ME594836	1.01	1.09	0.77	0.92	1.09	1.12
Carnitine	ME594830	1.01	1.10	0.77	0.91	1.08	1.13
Proline Betaine	ME594873	1.01	1.10	0.77	0.92	1.07	1.13
Pipecolinic Acid	ME594872	1.05	1.09	0.83	0.88	1.04	1.12
Alanine	ME594822	1.06	1.05	0.82	0.90	1.10	1.07
Nicotinamide	ME594862	1.03	1.05	0.82	0.93	1.08	1.09
Choline	ME594831	0.98	1.14	0.82	0.96	1.02	1.08
5^-Methylthioadenosine	ME594818	0.93	1.05	0.85	0.99	1.05	1.13
Guanine	ME594840	0.96	1.07	0.82	0.99	1.03	1.12
Guanosine	ME594841	0.96	1.06	0.81	1.02	1.04	1.11
Betaine	ME594826	1.00	1.04	0.90	0.97	1.04	1.05
Dimethylarginine	ME594884	1.01	1.00	0.89	1.00	1.04	1.06
N1-Acetylspermidine	ME594861	0.97	1.06	0.86	0.96	1.05	1.10
Ornithine	ME594865	1.00	1.06	0.85	0.96	1.06	1.08
Xanthine	ME594891	1.00	1.04	0.87	0.95	1.05	1.09
4-Guanidinobutyric Acid	ME594815	0.99	1.04	0.85	0.99	1.05	1.08
Lysine	ME594852	0.98	1.07	0.87	0.98	1.04	1.07
135.036@6.09, provisional ID = Homocysteine	ME594846	1.01	1.05	0.83	0.97	1.08	1.06
1-Methylnicotinamide	ME594807	0.99	1.03	0.87	0.95	1.09	1.07
Adenine	ME594820	0.92	1.00	1.04	1.42	0.73	0.90
ST 21:4;O5	ME594833	0.92	0.69	1.28	1.20	0.93	0.98
323.2824@1.13, provisional ID = NAE 18:2	ME594823	0.76	1.06	1.31	1.01	0.88	0.98
325.2973@1.13, provisional ID = NAE 18:1	ME594863	0.72	0.86	1.45	1.08	0.92	0.97

Factors:

F1	Protein:MED1 \| RNA:150 nM \| fraction:aqueous \| Extraction from condensate:No heat step \| timing of metabolite extract addition:standard
F2	Protein:MED1 \| RNA:150 nM \| fraction:aqueous \| Extraction from condensate:standard \| timing of metabolite extract addition:Metabolites added after 10 min incubation
F3	Protein:MED1 \| RNA:150 nM \| fraction:condensate \| Extraction from condensate:No heat step \| timing of metabolite extract addition:standard
F4	Protein:MED1 \| RNA:150 nM \| fraction:condensate \| Extraction from condensate:standard \| timing of metabolite extract addition:Metabolites added after 10 min incubation
F5	Protein:MED1 \| RNA:150 nM \| fraction:input \| Extraction from condensate:No heat step \| timing of metabolite extract addition:standard
F6	Protein:MED1 \| RNA:150 nM \| fraction:input \| Extraction from condensate:standard \| timing of metabolite extract addition:Metabolites added after 10 min incubation

Data matrix