Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002779)

GC POSITIVE ION MODE (Analysis AN004526)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9	F10	F11	F12	F13	F14	F15	F16
disaccharide_14.35	ME721096	1.91	0.42	0.49	NA	0.99	1.87	0.59	NA	0.71	2.82	0.61	NA	0.38	0.84	0.55	NA
hexose_13.45	ME721094	0.53	0.58	0.61	NA	0.30	2.69	0.38	NA	0.41	3.67	0.37	NA	0.38	1.48	0.39	NA
glycerate	ME721073	1.33	3.39	2.18	NA	0.65	0.80	0.57	NA	0.72	0.86	0.47	NA	0.91	0.63	0.58	NA
mannitol	ME721082	0.57	1.20	0.91	NA	0.49	0.92	0.78	NA	0.92	1.26	3.19	NA	0.58	0.75	0.62	NA
raffinose	ME721089	2.18	0.01	0.08	NA	0.23	0.13	0.14	NA	1.78	1.02	0.74	NA	1.60	1.76	1.64	NA
disaccharide_15.98	ME721097	0.51	0.73	1.21	NA	0.82	0.35	1.09	NA	1.60	0.67	1.03	NA	0.87	0.79	1.94	NA
glutamine	ME721072	1.33	1.52	1.62	NA	0.68	0.68	0.88	NA	0.65	0.85	0.72	NA	1.15	1.04	1.11	NA
fumarate	ME721065	1.97	1.76	1.51	NA	0.75	0.79	0.84	NA	0.81	0.93	0.68	NA	1.02	0.84	0.72	NA
malate	ME721080	1.98	2.30	1.98	NA	0.65	0.55	0.66	NA	0.67	0.82	0.59	NA	1.06	0.83	0.74	NA
disaccharide_21.5	ME721077	1.03	0.31	0.36	NA	0.59	0.54	0.51	NA	1.70	1.36	1.44	NA	1.14	1.16	1.38	NA
sucrose	ME721093	0.58	0.35	0.55	NA	0.58	1.16	0.77	NA	1.00	1.45	1.14	NA	0.90	1.56	1.32	NA
fructose	ME721064	0.81	1.47	0.79	NA	0.55	1.06	0.60	NA	0.75	1.52	0.74	NA	1.05	1.68	0.81	NA
lysine	ME721079	1.64	0.47	0.49	NA	1.24	0.70	0.71	NA	1.92	0.73	0.77	NA	1.58	0.88	0.87	NA
proline	ME721087	1.03	0.37	0.55	NA	0.78	1.17	0.73	NA	2.41	0.84	0.84	NA	0.77	0.84	1.37	NA
isoleucine	ME721076	1.27	0.59	0.59	NA	0.95	1.18	0.80	NA	1.86	0.91	0.94	NA	0.86	0.96	1.00	NA
leucine	ME721078	1.45	0.51	0.58	NA	0.99	1.24	0.66	NA	2.13	0.87	0.68	NA	0.91	0.88	1.05	NA
disaccharide_20.5	ME721081	0.78	1.01	0.72	NA	0.83	1.18	0.79	NA	1.13	0.93	2.01	NA	0.71	0.89	0.98	NA
serine	ME721090	1.04	0.83	0.91	NA	0.83	0.65	1.22	NA	1.14	0.81	1.59	NA	0.92	0.87	1.14	NA
methionine	ME721084	1.59	0.67	0.63	NA	1.07	0.70	0.78	NA	1.50	0.87	0.88	NA	1.41	0.99	0.93	NA
threonine	ME721095	1.14	0.71	0.69	NA	0.98	0.84	0.89	NA	1.42	1.08	1.18	NA	1.08	0.96	0.97	NA
phenylalanine	ME721086	1.33	0.73	0.60	NA	1.04	0.82	0.82	NA	1.59	0.99	1.07	NA	1.09	1.00	0.89	NA
valine	ME721098	1.33	0.72	0.61	NA	1.11	0.89	0.77	NA	1.53	1.07	1.03	NA	1.14	0.90	0.92	NA
gluconate	ME721069	1.08	1.01	1.05	NA	0.73	0.96	0.90	NA	1.04	1.21	1.04	NA	0.85	1.13	0.99	NA
pyruvate	ME721088	0.98	1.10	0.89	NA	0.83	0.96	0.77	NA	1.32	1.25	1.25	NA	0.89	0.91	0.92	NA
glucose	ME721070	1.37	1.05	0.62	NA	0.92	1.00	0.80	NA	1.14	1.26	1.02	NA	1.09	1.11	0.70	NA
disaccharide_14.98	ME721083	1.34	1.00	0.57	NA	0.85	0.97	0.76	NA	1.09	1.28	1.06	NA	1.11	1.23	0.73	NA
sorbitol	ME721091	1.39	0.99	0.59	NA	0.88	0.94	0.76	NA	1.11	1.25	0.96	NA	1.15	1.27	0.72	NA
gamma-aminobutyrate	ME721066	1.06	0.61	0.57	NA	0.90	0.83	0.74	NA	1.23	1.04	1.16	NA	1.16	1.10	1.28	NA
(iso)-citrate	ME721062	1.38	0.99	0.97	NA	0.76	0.66	0.66	NA	1.19	1.10	0.83	NA	1.23	1.18	1.03	NA
hexose-P	ME721068	1.27	0.88	0.88	NA	0.99	0.94	0.88	NA	1.00	1.08	0.86	NA	1.09	1.18	0.91	NA
asparagine	ME721059	1.19	0.88	0.96	NA	0.74	0.75	0.89	NA	1.02	0.97	0.93	NA	1.21	1.15	1.18	NA
sterol_ergostane	ME721061	1.42	0.87	0.91	NA	0.89	0.84	0.82	NA	1.01	0.93	1.01	NA	1.07	1.00	1.19	NA
sterol_stigmastanes	ME721099	1.23	0.70	0.77	NA	0.93	0.83	0.85	NA	1.13	0.99	1.13	NA	1.06	1.05	1.18	NA
DMPA (ISTD)	ME721063	1.49	1.12	0.81	NA	1.26	1.20	0.87	NA	1.36	1.21	0.79	NA	0.92	0.69	0.63	NA
myoinositol	ME721085	1.64	1.05	1.09	NA	1.11	0.81	0.81	NA	1.34	0.93	0.79	NA	1.11	0.76	0.86	NA
glutamate	ME721071	1.26	1.17	1.16	NA	0.86	0.84	0.95	NA	0.82	0.95	0.80	NA	1.13	1.13	0.99	NA
5-oxo-proline	ME721057	1.48	1.44	1.20	NA	0.96	0.82	0.87	NA	0.83	0.83	0.73	NA	1.27	0.92	0.93	NA
aspartate	ME721060	1.59	1.31	1.15	NA	1.04	0.90	0.95	NA	0.75	0.81	0.73	NA	1.22	0.86	0.97	NA
alanine	ME721058	1.64	1.32	1.10	NA	1.04	0.85	0.76	NA	0.96	0.95	0.76	NA	1.19	0.95	0.79	NA
disaccharide_21.9	ME721067	1.67	1.06	1.08	NA	1.01	0.80	0.80	NA	1.04	0.86	0.81	NA	1.16	0.93	0.98	NA
succinate	ME721092	1.73	1.52	1.06	NA	0.91	1.14	0.80	NA	0.93	1.13	0.79	NA	0.86	0.87	0.69	NA
glycerol	ME721074	1.35	1.48	0.84	NA	1.07	1.08	0.88	NA	1.21	1.07	0.93	NA	0.96	0.76	0.70	NA
glycine	ME721075	1.39	1.51	1.00	NA	0.98	0.80	0.92	NA	1.23	0.81	0.91	NA	1.06	0.77	0.92	NA

Factors:

F1	region:2cm \| genotype:sweet11;12
F2	region:2cm \| genotype:sweet2
F3	region:2cm \| genotype:sweet4
F4	region:2cm \| genotype:WT
F5	region:4cm \| genotype:sweet11;12
F6	region:4cm \| genotype:sweet2
F7	region:4cm \| genotype:sweet4
F8	region:4cm \| genotype:WT
F9	region:6cm \| genotype:sweet11;12
F10	region:6cm \| genotype:sweet2
F11	region:6cm \| genotype:sweet4
F12	region:6cm \| genotype:WT
F13	region:whole \| genotype:sweet11;12
F14	region:whole \| genotype:sweet2
F15	region:whole \| genotype:sweet4
F16	region:whole \| genotype:WT

Data matrix