Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002841)

(Analysis AN004649)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9	F10
Inosine-5^-monophosphate	ME738509	6.10	0.03	0.03	0.11	0.05	0.03	0.06	3.26	0.02	0.31
D-Mannitol	ME738490	1.30	0.71	0.27	0.82	0.22	0.92	0.20	4.65	0.34	0.56
Galactitol	ME738492	1.31	0.71	0.27	0.82	0.22	0.92	0.20	4.66	0.34	0.55
lactate	ME738511	0.23	0.54	0.19	2.96	0.30	1.20	0.10	0.81	1.90	1.77
Pyruvate	ME738523	0.39	0.41	0.38	2.65	0.32	2.13	0.50	0.30	1.44	1.48
Homovanillate	ME738507	3.43	0.17	0.95	0.20	0.04	0.02	1.26	3.04	0.23	0.66
Phenylpyruvate	ME738519	3.50	0.18	0.93	0.19	0.05	0.03	1.25	2.99	0.23	0.64
Glucono-1,5-lactone 6-phosphate	ME738494	2.02	0.45	1.04	0.66	0.81	1.05	1.02	2.12	0.28	0.55
methylmaleate	ME738516	1.59	0.59	0.70	0.87	0.64	1.44	0.91	1.76	0.89	0.62
Glutamylcysteine	ME738497	2.13	0.92	0.94	0.83	0.61	0.25	0.89	1.71	0.78	0.93
Hexose phosphates	ME738504	2.13	0.87	0.80	0.92	0.97	1.06	0.24	1.71	0.50	0.81
Sedoheptulose 7-phosphate	ME738524	2.63	1.28	0.52	0.57	0.93	0.60	0.09	2.25	0.62	0.51
erythro-4-Hydroxyglutamate	ME738491	2.76	0.50	1.24	0.68	0.85	0.43	0.32	2.32	0.53	0.38
Homovanillin	ME738508	2.24	1.01	0.61	0.63	0.92	0.47	0.67	2.02	0.89	0.54
Adenosine	ME738474	2.37	0.84	0.97	0.64	1.13	0.54	0.49	1.96	0.58	0.47
2^-Deoxy-Guanosine	ME738464	2.39	0.83	0.97	0.64	1.12	0.54	0.49	1.97	0.57	0.48
deoxyguanosine	ME738488	2.38	0.83	0.97	0.65	1.13	0.54	0.49	1.96	0.57	0.48
Xanthine	ME738532	1.70	1.56	0.49	0.34	0.65	0.18	0.59	2.56	1.44	0.49
Cis-aconitate	ME738483	2.44	0.47	0.47	0.58	0.50	0.92	0.47	3.05	0.63	0.47
Propionyladenylate	ME738522	2.36	1.03	0.51	0.36	0.56	0.23	0.55	3.02	0.96	0.41
Hexose diphosphate	ME738503	0.56	0.50	0.85	1.19	0.56	2.86	0.91	0.71	0.64	1.23
L-Ascorbic acid	ME738512	0.55	2.25	1.11	0.91	0.44	0.16	1.37	0.51	2.22	0.47
Arabinose	ME738480	0.29	0.67	1.85	1.57	0.57	0.29	2.01	0.42	0.77	1.56
phophoenolpyruvate	ME738520	0.11	0.92	1.30	0.92	0.73	1.10	2.65	0.14	1.35	0.77
Homocitrate	ME738505	0.34	0.99	1.68	0.69	0.86	0.41	2.67	0.43	1.02	0.92
Methylcitrate	ME738514	0.34	0.99	1.68	0.69	0.86	0.41	2.67	0.42	1.02	0.92
Galactonate	ME738493	0.58	0.49	0.95	0.83	0.59	0.57	2.98	0.74	1.08	1.19
Glycerate	ME738498	0.34	0.47	1.56	0.90	0.38	0.36	2.68	0.44	0.91	1.95
Hexose	ME738502	0.37	0.51	1.28	1.15	0.69	0.40	2.77	0.48	0.71	1.64
UDPGlcNAc	ME738529	1.66	0.14	1.02	1.49	0.48	0.91	1.08	0.78	0.15	2.29
glutamine	ME738496	0.91	0.78	0.89	0.83	0.77	0.35	1.30	1.09	0.92	2.15
Glycine	ME738499	0.43	0.70	1.07	1.59	0.58	0.73	1.15	0.66	0.78	2.30
3-Deoxy-arabino-heptulonate 7-phosphate	ME738469	0.99	0.99	1.18	0.89	0.87	1.68	0.61	1.10	0.94	0.75
Citric acid	ME738484	0.94	0.63	0.91	1.05	0.87	2.02	1.18	1.09	0.71	0.60
Cytidine monophosphate (CMP)	ME738486	1.29	1.01	0.71	0.55	1.64	0.82	0.77	1.55	1.01	0.66
GMP	ME738500	1.12	1.07	0.71	0.58	1.70	0.95	0.74	1.36	1.12	0.65
Adenosine monophosphate (AMP)	ME738476	0.82	0.90	0.83	0.97	1.28	0.97	0.85	1.10	0.90	1.39
UMP	ME738531	1.12	0.98	0.90	0.78	0.91	0.99	0.78	1.44	0.99	1.10
Cytidine diphosphate (CDP)	ME738485	1.00	0.77	1.03	0.93	1.19	1.04	1.34	1.11	0.83	0.75
Guanosine diphosphate (GDP)	ME738501	0.82	0.88	0.99	0.84	1.08	1.19	1.53	0.84	1.07	0.77
Acetolactate	ME738473	0.68	0.77	1.05	0.96	1.28	0.90	1.31	0.92	0.93	1.20
Phosphoribosyl-AMP	ME738521	0.65	1.12	1.00	0.95	1.01	1.12	1.35	0.72	1.06	1.02
UDP	ME738527	0.70	1.06	0.95	1.04	0.94	0.99	1.29	0.88	1.03	1.11
Adenosine diphosphate (ADP)	ME738475	0.56	0.87	1.09	1.16	0.87	1.05	1.45	0.69	0.96	1.30
Glutamic acid	ME738495	0.65	0.82	1.08	0.94	0.72	0.87	1.54	0.84	1.24	1.31
2-Deoxy-D-Ribose	ME738466	0.86	0.90	1.35	0.88	0.94	0.43	1.44	0.89	1.01	1.30
Isopropylmalate	ME738510	0.98	0.66	1.42	0.83	1.15	0.98	1.10	1.12	0.78	0.96
methylmalate	ME738515	1.13	0.64	1.23	1.00	1.27	0.46	1.30	1.06	0.99	0.92
UDP-hexose	ME738530	1.47	0.58	1.35	0.88	0.54	0.70	1.37	1.14	0.50	1.48
5-Oxo-proline	ME738472	1.03	1.02	0.97	0.75	0.61	0.40	1.41	1.35	1.36	1.11
Alpha-Ketoglutaric acid	ME738479	1.49	1.02	1.13	0.78	0.85	0.57	0.85	1.82	0.91	0.58
4-Acetylaminobutanal	ME738471	1.46	0.78	1.10	0.96	0.81	0.45	1.02	1.52	0.74	1.16
malate	ME738513	1.36	0.80	1.05	0.91	0.66	0.65	1.49	1.44	0.77	0.86
2,3-Dihydroxy-2-methylpentanoate	ME738463	1.32	0.83	1.17	0.89	0.91	0.82	1.12	1.44	0.76	0.75
Dihydroxy-3-methylvalerate	ME738489	1.31	0.82	1.16	0.89	0.90	0.82	1.13	1.44	0.77	0.75
Pantoate	ME738518	1.32	0.83	1.16	0.89	0.90	0.82	1.12	1.43	0.77	0.75
Aspartate 4-semialdehyde	ME738482	0.53	0.90	0.92	2.13	0.50	0.90	0.72	0.50	1.42	1.48
D-ala-D-ala	ME738487	0.09	1.47	0.73	1.32	0.92	1.26	0.88	0.09	1.46	1.79
N-acetyl-2,4-diaminobutanoate	ME738517	0.09	1.49	0.74	1.33	0.93	1.28	0.77	0.08	1.48	1.81
Homocysteine	ME738506	0.00	1.05	1.39	1.03	1.64	0.91	1.23	0.06	1.73	0.96
asparagine	ME738481	0.03	0.72	1.61	1.24	1.20	1.11	1.81	0.05	0.80	1.43
Alanine	ME738478	0.34	0.84	1.23	1.45	1.30	1.26	1.00	0.41	0.90	1.27
UDP-acetylmuramate (UDP-MurNAc)	ME738528	0.62	0.68	1.62	1.27	0.93	0.96	1.49	0.54	0.68	1.21
AICAR	ME738477	0.32	0.80	1.11	0.99	0.78	0.91	1.95	0.41	1.33	1.40
2^-deoxyadenosine	ME738465	0.51	1.19	0.99	1.12	0.91	0.62	1.33	0.60	1.23	1.49
2-Oxoisovalerate	ME738468	0.41	1.21	0.89	1.12	0.73	0.84	1.57	0.38	1.42	1.44
2-Oxoisocaproate	ME738467	0.30	1.14	0.81	1.14	0.80	0.95	1.51	0.32	1.29	1.75
3-Methyl-2-oxopentanoate	ME738470	0.30	1.11	0.82	1.16	0.81	0.95	1.52	0.32	1.28	1.72
succinate	ME738525	0.52	1.00	1.52	1.07	0.59	0.76	1.49	0.47	1.33	1.25
succinate semialdehyde	ME738526	0.66	0.65	1.56	1.36	0.47	1.05	1.09	0.49	1.60	1.06

Factors:

F1	Genotype:mnePmneS_Mn_treated
F2	Genotype:mnePmneS_untreated
F3	Genotype:sodA_Mn_treated
F4	Genotype:sodA_untreated
F5	Genotype:WTCU1065_Mn_treated
F6	Genotype:WTCU1065_untreated
F7	Genotype:yqgC_Mn_treated
F8	Genotype:yqgC-sodA_Mn_treated
F9	Genotype:yqgC-sodA_untreated
F10	Genotype:yqgC_untreated

Data matrix