Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002912)

(Analysis AN004782)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
phosphoserine	ME759136	0.02	NA	0.14	0.33	1.60	2.77
trans-urocanate	ME759157	1.24	0.56	0.58	0.41	0.93	2.68
propionylcarnitine	ME759139	2.64	1.32	0.83	0.29	0.27	0.28
cytidine	ME759069	0.45	0.48	0.33	1.06	2.12	2.12
aspartate	ME759049	0.58	0.51	0.65	1.04	1.64	1.98
lysine	ME759111	0.51	0.68	0.81	0.75	1.76	1.91
cystathionine	ME759067	0.28	0.26	1.18	1.89	1.45	1.08
uracil	ME759164	0.28	0.39	1.01	1.78	1.51	1.22
hypotaurine	ME759102	0.57	0.23	0.82	1.52	1.62	1.54
NADPH	ME759125	0.23	0.40	1.12	1.56	1.28	1.65
dUMP	ME759076	0.16	0.56	0.56	1.61	1.84	1.63
serine	ME759152	0.06	0.06	1.03	1.45	1.95	1.90
AICAR	ME759040	0.45	0.98	2.16	1.00	0.68	0.55
PRPP	ME759140	0.31	0.59	1.94	1.35	0.93	0.81
Ribose-1-phosphate	ME759146	0.43	0.64	2.11	1.25	0.79	0.64
3-methyl-2-oxopentanoic acid	ME759031	1.38	1.33	1.44	0.71	0.49	0.36
N-acetylcysteine	ME759117	1.05	1.14	1.76	0.77	0.43	0.61
Glycerol 3-Phosphate	ME759090	1.16	1.86	0.76	0.81	0.65	0.56
Sedoheptulose-7-phosphate	ME759151	1.70	2.04	0.65	0.58	0.40	0.31
Butyrylcarnitine	ME759055	1.56	1.68	1.07	0.64	0.42	0.32
lactic acid	ME759109	1.44	1.76	1.17	0.78	0.30	0.17
betaine	ME759053	1.60	0.89	0.97	0.66	0.83	1.01
quinolinic acid	ME759145	1.59	1.37	0.69	0.70	0.74	0.98
acetylglutamate	ME759037	1.67	1.27	0.60	1.03	0.61	0.62
N-acetylglutamate	ME759118	1.67	1.27	0.60	1.03	0.61	0.62
argininosuccinate	ME759046	1.85	1.20	0.89	0.66	0.66	0.53
acetylserine	ME759038	1.77	1.37	0.88	0.71	0.55	0.47
N-acetylmethionine	ME759121	1.72	1.36	0.84	0.69	0.64	0.55
cystine	ME759068	0.79	1.71	0.83	0.59	0.89	1.22
xanthosine	ME759167	1.14	0.54	1.50	1.50	0.54	0.39
alanine	ME759041	0.86	0.69	1.26	1.62	0.86	0.55
sarcosine	ME759150	0.86	0.69	1.27	1.63	0.86	0.55
threonine	ME759156	0.71	0.69	0.79	1.09	1.53	1.44
phenylalanine	ME759132	0.65	0.75	0.90	0.89	1.59	1.50
tryptophan	ME759158	0.66	0.78	0.91	0.88	1.49	1.53
O-phosphoethanolamine	ME759128	0.59	0.62	1.03	0.99	1.52	1.50
phosphoethanolamine	ME759135	0.58	0.67	0.96	1.05	1.47	1.52
cytosine	ME759070	0.88	0.78	0.72	1.23	1.31	1.22
glycine	ME759092	0.82	0.83	0.81	1.19	1.23	1.24
GSSG	ME759095	0.75	0.65	0.86	1.25	1.34	1.31
creatine	ME759064	0.59	0.82	0.90	1.26	1.38	1.20
Pantothenate	ME759131	0.68	0.74	0.88	1.34	1.33	1.15
choline	ME759059	0.33	0.62	1.26	0.86	1.58	1.64
GAR	ME759083	0.32	0.55	1.29	1.31	1.40	1.31
glucose	ME759086	0.47	0.78	1.42	1.01	1.20	1.21
creatinine	ME759065	1.09	0.83	0.69	0.84	0.95	1.77
glutamine	ME759088	0.96	0.96	0.60	0.85	1.45	1.39
N-acetylglutamine	ME759119	1.45	1.11	0.49	0.58	1.23	1.28
ornithine	ME759129	1.23	1.01	0.78	0.73	1.10	1.24
IMP	ME759104	0.81	0.99	1.34	1.12	0.86	0.80
sorbitol	ME759153	0.85	0.94	1.39	1.29	0.74	0.63
alpha-keto-isovalerate	ME759042	0.94	1.02	1.47	0.87	0.92	0.69
UDP	ME759162	0.95	0.79	1.38	0.93	0.95	0.99
2-hydroxybutyric	ME759028	1.29	0.89	0.98	1.35	0.76	0.56
3-hydroxybutyric acid	ME759030	1.28	0.90	0.97	1.36	0.74	0.60
NADH	ME759123	0.92	1.23	1.09	1.34	0.81	0.42
pseudouridine	ME759141	1.06	1.07	1.01	1.32	0.81	0.56
asymmetric dimethylarginine	ME759050	1.05	1.02	0.91	1.20	0.97	0.79
NAD+	ME759122	1.04	1.02	1.00	1.18	0.94	0.75
histidine	ME759100	0.96	0.98	1.16	0.98	0.95	0.93
Glucose 6-phosphate	ME759085	0.94	1.04	1.09	1.10	1.01	0.76
erythrose-4-phosphate	ME759077	0.95	1.05	1.17	1.08	0.95	0.72
Ribose Ribulose 5-phosphate 3Me-Lys	ME759147	0.91	1.03	1.23	1.05	0.95	0.76
kynurenine	ME759108	1.08	1.09	1.03	0.99	0.92	0.82
methylthioadenosine	ME759115	1.04	1.03	1.05	1.09	0.96	0.78
S-Adenosyl-L-Homocysteine	ME759148	1.08	1.03	1.12	1.04	0.89	0.76
4-Hydroxyphenylpyruvic acid	ME759033	1.30	1.01	1.08	0.84	0.97	0.71
succinate	ME759154	1.26	0.99	1.18	0.91	0.84	0.70
dTTP	ME759075	1.17	0.91	1.13	0.93	0.89	0.93
niacinamide	ME759126	1.16	1.12	1.15	0.84	0.76	0.87
inosine	ME759105	1.36	1.07	0.68	1.14	0.85	0.82
GTP	ME759096	1.18	1.09	0.87	1.02	0.91	0.85
palmitate	ME759130	1.23	1.09	0.92	0.99	0.96	0.73
ATP	ME759051	1.26	1.13	0.79	0.94	0.96	0.88
phosphocholine	ME759133	1.26	1.20	0.86	0.94	0.90	0.76
Acetyl CoA	ME759035	1.15	1.15	1.00	1.06	0.84	0.70
fumarate	ME759082	1.34	1.11	0.99	0.93	0.81	0.69
malate	ME759112	1.30	1.13	0.95	0.95	0.85	0.70
formylmethionine	ME759080	1.43	1.14	1.08	0.87	0.71	0.60
pyruvate	ME759144	1.40	1.17	1.17	0.88	0.66	0.51
Nicotinic Acid	ME759127	1.50	1.15	0.94	0.97	0.64	0.62
Picolinate	ME759137	1.60	1.05	0.98	0.86	0.75	0.60
succinyl-CoA	ME759155	1.48	1.02	1.00	0.94	0.74	0.67
dATP	ME759071	1.31	1.32	0.82	0.91	0.76	0.75
acetylcarnitine	ME759036	1.35	1.41	0.88	0.76	0.79	0.67
proline	ME759138	1.28	1.36	0.92	0.73	0.83	0.78
6-phosphogluconate	ME759034	1.19	1.25	1.09	0.96	0.80	0.55
F6P_G1P	ME759078	1.14	1.37	0.91	0.99	0.81	0.64
dihydroxyacetone phosphate	ME759074	1.32	1.39	0.89	1.01	0.71	0.48
Fructose 1,6-bisphosphate	ME759081	1.26	1.44	0.87	1.01	0.67	0.56
xanthine	ME759166	0.86	0.94	0.77	1.58	0.86	0.93
3-phosphoglycerate	ME759032	0.92	0.85	1.07	0.97	1.19	1.07
leucine	ME759110	0.88	0.95	0.97	0.96	1.18	1.13
Pyridoxine	ME759143	0.82	1.01	1.02	1.00	1.15	1.04
2,3-Bisphosphoglyceric acid	ME759027	1.00	0.88	0.96	0.94	1.12	1.17
Methionine sulfoxide	ME759113	0.98	0.95	0.96	0.94	1.06	1.16
isoleucine	ME759106	0.99	1.03	1.00	0.98	1.02	0.99
tyrosine	ME759159	0.97	0.97	0.96	0.99	1.10	1.03
methionine	ME759114	0.84	0.89	0.92	0.90	1.31	1.27
phosphoenolpyruvate	ME759134	0.82	0.84	1.04	1.01	1.37	1.02
hydroxyproline gammaALA	ME759101	0.71	0.68	1.01	1.37	1.23	1.07
myo-inositol	ME759116	0.81	0.78	0.91	1.38	1.17	0.99
glutamate	ME759087	0.82	0.77	0.95	1.30	1.18	1.03
Pyridoxal	ME759142	0.80	0.78	0.91	1.31	1.23	1.03
dCTP	ME759072	0.69	0.86	1.05	1.16	1.22	1.11
UTP	ME759165	0.81	0.78	1.17	1.13	1.10	1.05
cAMP	ME759056	0.85	0.85	1.05	1.17	1.08	1.02
UDP-hexose	ME759161	0.85	0.79	1.01	1.23	1.14	1.02
biotin	ME759054	0.84	0.91	1.06	1.22	1.05	0.91
Coenzyme A	ME759063	0.79	0.88	0.98	1.31	1.06	1.00
beta-alanine	ME759052	0.92	0.90	0.94	1.34	1.05	0.81
NADP	ME759124	1.02	0.86	0.89	1.19	1.19	0.86
asparagine	ME759048	1.06	0.95	0.81	1.19	1.08	0.91
GMP	ME759093	1.10	0.85	0.83	1.13	1.13	0.99
UDP-GlcNAc	ME759160	1.05	0.88	0.88	1.10	1.12	1.01
UMP	ME759163	0.99	0.81	1.05	1.17	1.01	0.97
CMP	ME759062	1.02	0.89	0.96	1.12	1.06	0.96
CTP	ME759066	1.03	0.88	1.04	1.05	1.02	0.98
citrate	ME759061	0.99	0.96	1.00	1.13	1.02	0.86
FAD	ME759079	0.95	0.97	0.92	1.15	1.10	0.93
GUANOSINE_15N5	ME759099	0.99	0.92	0.91	1.23	1.03	0.90
N-acetyllysine	ME759120	0.91	0.94	0.92	1.23	1.07	0.93
CDP	ME759058	1.24	0.94	0.88	0.96	0.97	1.00
Alpha-Lipoic Acid	ME759043	1.04	1.24	0.76	0.97	1.04	0.95
arginine	ME759045	1.10	1.13	0.86	0.95	1.03	0.92
carnitine	ME759057	1.09	1.16	0.90	0.84	1.03	0.98
guanine	ME759097	1.17	1.02	0.57	1.11	1.13	1.04
AMP	ME759044	1.21	1.02	0.70	1.05	1.05	0.97
2-hydroxyglutarate	ME759029	1.15	1.03	0.69	1.02	1.11	1.02
ADP	ME759039	1.16	1.03	0.76	0.97	1.07	1.04
S-Adenosyl-L-methionine	ME759149	1.11	1.09	0.73	1.11	1.06	0.89
ascorbate	ME759047	1.08	1.12	0.76	1.03	1.08	0.95
GDP	ME759084	1.09	1.06	0.78	1.05	1.03	0.99
Itaconic Acid	ME759107	1.09	1.03	0.73	1.07	1.08	1.03
GSH	ME759094	0.90	0.96	0.82	1.12	1.24	1.05
cis-aconitate	ME759060	1.06	1.00	0.66	1.01	1.21	1.14
Glycerophosphocholine	ME759091	1.01	1.03	0.64	1.01	1.27	1.15
dCytidine	ME759073	0.93	1.19	0.66	1.08	1.22	0.97
glycerate	ME759089	0.95	1.20	0.70	0.97	1.07	1.17
guanosine	ME759098	1.07	0.89	0.66	1.30	1.20	0.90
hypoxanthine	ME759103	1.22	0.88	0.51	1.12	1.18	1.19

Factors:

F1	100nM_Folic_Acid_Growth:Day0
F2	100nM_Folic_Acid_Growth:Day1
F3	100nM_Folic_Acid_Growth:Day2
F4	100nM_Folic_Acid_Growth:Day4
F5	100nM_Folic_Acid_Growth:Day6
F6	100nM_Folic_Acid_Growth:Day8

Data matrix