Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002913)

(Analysis AN004783)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
Glycerol 3-Phosphate	ME759224	0.83	0.86	0.55	0.65	1.13	2.29
acetylaspartate	ME759175	0.49	0.61	0.84	1.23	1.40	1.57
creatine	ME759201	0.47	0.45	0.48	1.12	1.79	1.91
phosphocreatine	ME759259	0.51	0.56	0.58	1.21	1.65	1.64
GAR	ME759217	0.14	0.30	0.98	1.45	1.64	1.65
Ribose 1-phosphate	ME759267	0.23	0.36	1.34	1.42	1.41	1.33
AICAR	ME759180	0.27	0.83	2.06	1.38	0.79	0.55
6-phosphogluconate	ME759172	1.72	1.82	0.85	0.73	0.38	0.34
dATP	ME759208	1.59	1.71	0.90	0.61	0.55	0.53
Butyrylcarnitine	ME759194	1.66	1.54	1.23	0.63	0.47	0.29
acetylserine	ME759177	1.77	1.60	1.31	0.51	0.34	0.29
phosphocholine	ME759258	1.70	1.71	1.37	0.51	0.30	0.22
cystathionine	ME759203	1.47	1.64	1.33	0.86	0.34	0.15
N-acetylglutamine	ME759247	1.44	1.46	1.44	0.72	0.39	0.40
3-methyl-2-oxopentanoic acid	ME759170	1.60	1.17	0.69	0.86	0.98	0.59
alpha-keto-isovalerate	ME759182	1.46	1.11	0.69	0.91	1.03	0.73
lactic_acid	ME759238	1.96	1.26	0.63	0.53	0.81	0.74
dihydroxyacetone phosphate	ME759210	1.68	1.45	0.68	0.56	0.66	0.96
Glycerophosphocholine	ME759225	1.77	1.38	0.63	0.63	0.70	0.85
cystine	ME759204	1.38	0.54	0.99	0.66	1.60	0.77
dCTP	ME759209	1.03	0.85	0.47	1.03	1.58	1.06
NADP	ME759250	1.32	0.69	0.65	1.34	0.96	1.06
ATP	ME759190	1.50	1.39	0.94	0.79	0.67	0.62
methylthioadenosine	ME759245	1.41	1.32	1.02	0.83	0.73	0.58
CDP	ME759198	1.34	1.14	1.31	0.79	0.73	0.59
UMP	ME759283	1.33	1.25	1.18	0.56	0.81	0.81
propionylcarnitine	ME759264	1.00	1.21	1.26	1.19	0.73	0.47
Glucose 6-phosphate	ME759219	1.07	1.14	1.25	1.15	0.69	0.60
UTP	ME759284	0.98	1.13	1.34	1.10	0.74	0.63
acetylcarnitine	ME759176	1.27	1.21	1.10	1.08	0.64	0.60
CTP	ME759202	1.19	1.29	1.26	0.96	0.64	0.55
S-Adenosyl-L-methionine	ME759270	1.15	1.20	1.20	1.04	0.73	0.58
adenine	ME759178	1.04	1.28	1.02	1.00	0.71	0.95
IMP	ME759234	0.99	1.39	1.03	0.93	0.84	0.74
S-Adenosyl-L-Homocysteine	ME759269	1.12	1.24	1.01	1.05	0.79	0.72
GSSG	ME759228	1.05	1.24	1.03	1.03	0.78	0.82
isoleucine	ME759235	1.05	1.29	1.01	0.98	0.83	0.78
Methionine sulfoxide	ME759243	1.05	1.18	1.16	1.01	0.78	0.76
methionine	ME759244	1.03	1.11	1.17	1.04	0.83	0.76
tryptophan	ME759278	1.07	1.13	1.15	0.98	0.83	0.77
valine	ME759285	1.09	1.14	1.07	1.01	0.83	0.81
leucine	ME759239	1.12	1.19	1.04	0.97	0.87	0.75
phenylalanine	ME759257	1.14	1.14	1.08	0.98	0.85	0.74
tyrosine	ME759279	1.10	1.15	1.11	0.97	0.85	0.75
Acetyl CoA	ME759174	1.16	1.33	1.03	0.98	0.76	0.65
GTP	ME759229	1.29	1.33	0.98	0.90	0.75	0.66
UDP-hexose	ME759281	1.17	1.23	1.06	0.86	0.83	0.80
UDP-GlcNAc	ME759280	1.23	1.22	0.90	0.92	0.87	0.82
fumarate	ME759216	1.29	1.23	0.97	0.96	0.74	0.74
malate	ME759241	1.25	1.21	0.96	0.97	0.81	0.74
Sedoheptulose-7-phosphate	ME759272	1.17	1.12	1.12	0.86	0.68	1.06
GDP	ME759218	1.21	1.12	0.98	0.80	0.96	0.92
ADP	ME759179	1.27	1.16	0.98	0.80	0.85	0.91
Pantothenate	ME759256	1.22	1.17	0.98	0.77	0.86	1.00
F6P_G1P	ME759213	0.82	1.16	1.15	1.01	0.79	1.11
cytosine	ME759207	0.85	1.08	1.24	1.14	0.77	0.89
histidine	ME759232	0.93	1.01	1.18	1.10	0.91	0.82
threonine	ME759276	0.98	1.06	1.13	1.07	0.89	0.84
GSH_Ellmans	ME759227	0.96	1.02	1.14	1.03	0.88	0.95
asparagine	ME759187	0.93	1.01	1.20	1.00	0.91	0.93
glutamine	ME759222	0.97	0.99	1.16	1.02	0.92	0.91
carnitine	ME759197	0.93	1.01	1.09	1.11	0.94	0.90
serine	ME759273	0.90	1.02	1.10	1.05	0.96	0.97
guanine	ME759230	0.99	1.11	1.05	1.02	0.81	1.04
biotin	ME759193	1.06	1.08	1.09	0.91	0.90	0.96
NAD+	ME759248	1.07	1.08	0.99	0.92	0.88	1.08
niacinamide	ME759252	1.01	0.96	0.98	1.04	1.09	0.91
Pyridoxine	ME759266	1.04	0.93	1.00	1.01	1.07	0.93
Cystathionine_Ellmans	ME759205	1.15	1.10	0.94	1.07	0.92	0.77
hydroxyproline gammaALA	ME759233	1.05	1.03	1.05	1.05	0.89	0.91
argininosuccinate	ME759185	1.07	1.08	0.93	1.04	0.95	0.90
phosphoenolpyruvate	ME759260	0.99	1.10	0.99	1.05	0.93	0.93
kynurenine	ME759237	1.17	0.98	1.13	0.93	0.93	0.80
UDP	ME759282	1.03	0.96	1.37	0.89	0.93	0.76
C5 Carnitines	ME759195	0.60	0.67	0.94	1.62	1.21	0.95
aspartate	ME759188	0.68	0.74	1.13	1.19	1.18	1.10
betaine	ME759192	0.59	0.65	1.15	1.39	1.03	1.26
3-phosphoglycerate	ME759171	1.04	1.09	0.81	1.07	0.99	1.00
palmitate	ME759255	1.02	0.98	0.69	1.15	1.08	1.10
AMP	ME759183	1.04	1.03	0.87	0.84	1.05	1.22
cytidine	ME759206	1.03	0.96	0.78	1.00	0.98	1.34
cAMP	ME759196	0.98	1.00	1.00	1.21	1.03	0.71
succinyl-CoA	ME759275	0.99	1.04	0.87	1.23	1.10	0.69
Fructose 1,6-bisphosphate	ME759215	0.83	0.88	0.82	1.32	1.04	1.14
glucose	ME759220	0.83	0.80	0.92	1.19	1.19	1.10
mannose	ME759242	0.83	0.80	0.92	1.19	1.19	1.10
Ribose_Ribulose 5-phosphate_3Me-Lys	ME759268	0.93	0.88	0.96	1.11	1.02	1.14
arginine	ME759184	0.90	0.87	1.05	1.10	1.09	0.98
Pyridoxal	ME759265	0.90	0.87	1.03	1.08	1.10	1.03
glutamate	ME759221	0.94	0.90	0.92	1.10	1.12	1.04
lysine	ME759240	0.88	0.86	0.91	1.19	1.16	0.98
beta-alanine	ME759191	0.78	0.86	0.99	1.26	1.17	0.91
asymmetric dimethylarginine	ME759189	0.84	0.87	1.05	1.25	0.98	1.02
proline	ME759263	0.85	0.94	1.08	1.21	1.00	0.90
alanine	ME759181	0.85	0.79	0.75	1.03	1.25	1.44
glycine	ME759226	0.98	0.80	0.65	1.01	1.25	1.42
sarcosine	ME759271	0.89	0.86	0.64	1.11	1.23	1.36
myo-inositol	ME759246	0.76	0.75	0.82	1.19	1.32	1.22
FAD	ME759214	0.78	0.88	0.77	1.10	1.32	1.20
NADPH	ME759251	0.76	0.86	0.82	1.08	1.26	1.30
NADH	ME759249	0.59	0.99	0.98	0.89	1.22	1.46
succinate	ME759274	0.90	0.91	1.15	0.92	1.02	1.12
ornithine	ME759254	0.86	0.86	1.07	0.99	1.00	1.29
glycerate	ME759223	0.83	0.81	1.05	0.94	1.16	1.27
ascorbate	ME759186	0.85	0.83	1.11	0.93	1.10	1.23
2-hydroxyglutarate	ME759168	0.82	0.85	1.15	0.94	1.10	1.19
Itaconic Acid	ME759236	0.82	0.85	1.18	0.94	1.08	1.17
trans-urocanate	ME759277	0.98	0.74	1.04	0.81	1.00	1.57
GUANOSINE_15N5	ME759231	0.89	0.84	1.02	0.82	1.10	1.45
2-oxobutyric acid	ME759169	0.91	0.82	0.92	0.86	1.22	1.36
acetoacetate	ME759173	0.91	0.82	0.92	0.86	1.22	1.36
dTTP	ME759211	1.16	0.74	1.68	0.81	0.89	0.62
phosphoserine	ME759262	0.83	0.81	1.55	1.30	0.78	0.63
cis-aconitate	ME759199	0.79	1.03	1.38	1.45	0.72	0.52
citrate	ME759200	0.89	1.07	1.30	1.41	0.68	0.53
dUMP	ME759212	0.05	0.03	0.06	1.05	3.17	1.87
O-phosphoethanolamine	ME759253	0.07	0.11	0.15	0.63	2.23	3.42
phosphoethanolamine	ME759261	0.10	0.11	0.16	0.66	2.19	3.38

Factors:

F1	100nM_Folic_Acid_Growth:Day0
F2	100nM_Folic_Acid_Growth:Day1
F3	100nM_Folic_Acid_Growth:Day2
F4	100nM_Folic_Acid_Growth:Day4
F5	100nM_Folic_Acid_Growth:Day6
F6	100nM_Folic_Acid_Growth:Day8

Data matrix