Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003081)

(Analysis AN005039)

Metabolite	Structure	F1	F2	F3	F4
alanine-13C3-15N	ME800995	0.40	0.41	4.02	0.35
L-ALANINE_13C3	ME801094	0.40	0.41	4.02	0.35
L-LEUCINE_13C6	ME800890	1.23	1.21	2.17	0.49
HYPOXANTHINE_13C5	ME801075	0.99	0.87	1.98	0.60
L-PHENYLALANINE_RING-13C6	ME801103	1.05	1.05	1.62	0.63
L-TYROSINE_RING-13C6	ME800998	0.94	1.02	1.78	0.63
CREATININE_N-METHYL-D3	ME801099	1.61	1.57	1.64	1.00
glycerate	ME800939	1.47	1.47	1.35	0.95
N-acetylglutamate	ME800903	1.40	1.50	0.96	0.98
Pyridoxine	ME801072	1.33	1.04	1.29	0.83
FUMARIC ACID_13C4	ME800930	1.13	1.11	1.40	0.66
L-TRYPTOPHAN_13C11	ME800913	1.07	1.11	1.42	0.69
"ALPHA-KETOGLUTARIC ACID_1,2,3,4- 13C4"	ME801023	1.02	1.16	1.15	0.98
Ureidosuccinic_acid	ME800951	1.37	1.36	1.15	0.83
Itaconic Acid	ME800889	1.17	1.21	1.09	0.73
"THYMINE_1,3-15N2"	ME801039	1.20	1.20	1.11	0.71
Alpha-Lipoic Acid_unc	ME801020	1.24	1.32	1.15	0.76
NICOTINAMIDE_13C6	ME800909	1.18	1.36	1.05	0.81
cystathionine	ME800977	0.82	1.32	0.27	1.76
Cholic acid	ME800884	2.18	0.75	NA	0.58
Chenodeoxycholic acid	ME801076	1.88	0.95	NA	0.40
Deoxycholic acid	ME800963	1.88	0.95	NA	0.40
xanthine	ME801038	1.12	1.82	NA	1.36
choline	ME801015	1.56	1.27	0.00	1.41
ascorbate_unc	ME800918	1.53	1.22	0.41	1.05
amidoadipate	ME800919	1.21	1.51	0.35	0.88
fumarate	ME800936	1.31	1.40	0.37	0.90
glycine	ME800871	1.25	1.44	0.48	0.84
2-hydroxyglutarate	ME800863	1.27	1.22	0.76	0.84
Alpha-Ketoglutarate	ME801101	1.14	1.30	0.54	0.96
aspartate	ME800992	1.25	1.45	0.70	1.02
N-acetylmethionine	ME801105	0.95	1.09	NA	0.97
kynurenine	ME800869	1.50	1.17	NA	0.81
Kynurenic Acid	ME800989	1.33	1.01	NA	0.83
S-Adenosyl-L-Homocysteine	ME801096	1.25	1.10	NA	0.81
3-phosphoglycerate	ME801008	1.18	1.28	NA	0.67
Glycerol 3-Phosphate	ME800984	1.10	1.33	NA	0.73
dimethylglicine	ME800973	1.17	1.29	NA	0.72
3-methyl-2-oxopentanoic_acid	ME800942	1.15	1.28	NA	0.74
O-phosphoethanolamine	ME800876	1.16	1.27	NA	0.74
N-alpha-acetyllysine	ME800969	1.08	1.28	NA	0.77
formyl_methionine	ME801002	1.13	1.26	NA	0.76
Pipecolate	ME801073	1.12	1.27	NA	0.76
saccharopine_unc	ME800987	1.11	1.27	NA	0.76
allantoin	ME800896	1.03	1.28	NA	0.80
hypoxanthine	ME801098	1.13	1.17	NA	0.82
INDOLE-3-ACETIC ACID	ME800952	1.14	1.22	NA	0.78
inosine	ME800926	1.13	1.22	NA	0.79
anserine	ME800886	1.08	1.22	NA	0.81
carnosine	ME800959	1.07	1.23	NA	0.81
argininosuccinate_unc	ME801003	1.09	1.20	NA	0.82
uridine	ME800965	1.11	1.21	NA	0.80
biotin	ME800862	1.20	1.20	NA	0.77
palmitate	ME801005	1.21	1.22	NA	0.74
cystine	ME800978	1.20	1.23	NA	0.75
uracil	ME801061	1.20	1.22	NA	0.75
phosphoenolpyruvate	ME801030	1.25	1.18	NA	0.76
"Fructose 1,6-bisphosphate"	ME801052	1.31	1.15	NA	0.75
N-acetylphenylalanine	ME800981	1.29	1.18	NA	0.74
dCytidine	ME800865	1.35	1.25	0.04	0.81
pseudouridine_unc	ME800927	1.24	1.29	NA	0.85
3-ureidopropionate	ME800966	1.26	1.26	0.01	0.86
cytidine	ME800950	1.28	1.27	0.01	0.84
Glucose 6-phosphate	ME800864	1.16	1.40	NA	0.65
3-hydroxybutyric_acid	ME801085	1.00	1.39	NA	0.74
C5 Carnitines	ME801013	1.11	1.48	NA	0.79
sorbitol	ME800905	1.11	1.41	NA	0.80
asparagine	ME800976	1.20	1.39	0.01	0.80
homocitrulline	ME800946	1.17	1.33	0.00	0.86
adenine	ME800870	1.15	1.21	NA	1.01
p-aminobenzoate	ME800898	1.10	1.28	0.17	0.90
phosphocreatine	ME800985	1.38	1.61	0.34	1.22
glucose	ME800949	1.15	1.62	0.04	0.99
orotate	ME800857	1.14	1.45	0.03	1.11
histidine	ME800881	1.45	1.60	0.00	1.20
S-Adenosyl-L-methionine	ME801106	1.55	1.70	NA	1.25
N-acetylaspartate	ME800894	1.60	1.78	NA	1.14
leucine	ME800954	1.64	1.76	0.00	1.00
ornithine	ME801047	1.55	1.74	0.01	1.06
valine	ME800914	1.57	1.68	NA	1.06
tryptophan	ME801021	1.61	1.55	0.00	0.99
asymmetric dimethylarginine	ME800908	1.53	1.59	0.00	1.01
citrate	ME800958	1.56	1.55	0.01	1.02
lysine	ME801055	1.55	1.57	0.00	1.01
GSSG	ME801014	1.48	1.57	NA	1.01
guanine	ME800860	1.51	1.54	0.03	1.04
gamma-glutamyl-alanine	ME800854	1.48	1.60	0.07	0.99
Butyrylcarnitine	ME801040	1.45	1.70	0.00	0.98
isoleucine	ME801016	1.48	1.64	0.01	1.00
succinate	ME801087	1.51	1.54	0.24	0.93
guanidinoacetate	ME800901	1.35	1.56	0.01	0.95
citrulline	ME800957	1.34	1.59	0.01	0.93
propionylcarnitine	ME800974	1.37	1.58	0.01	0.92
2-hydroxybutyric_acid	ME800948	1.37	1.53	0.12	0.90
alpha-keto-isovalerate	ME801009	1.33	1.54	0.20	0.87
thymidine	ME801069	1.37	1.34	0.16	0.86
betaine	ME801053	1.50	1.38	0.00	0.99
hydroxyproline_gammaALA	ME801000	1.42	1.43	0.08	0.96
quinolinic_acid	ME800938	1.45	1.47	0.02	0.96
5-CH3-H4PteGlu	ME800990	1.36	1.48	0.04	0.82
F6P_G1P	ME801102	1.40	1.43	NA	0.85
cis-aconitate	ME800885	1.28	1.42	0.01	0.91
threonine	ME801048	1.37	1.34	0.04	0.90
cytosine	ME800943	1.38	1.38	0.02	0.88
tyrosine	ME801051	1.36	1.37	NA	0.91
glutamate	ME801006	1.68	1.54	0.80	1.23
malate	ME801107	1.73	1.76	0.56	1.18
UMP	ME800874	1.75	1.67	NA	0.78
creatinine	ME800934	1.80	1.89	0.02	1.16
phenylalanine	ME801019	1.81	1.75	0.00	1.10
indolelactate	ME800858	1.77	1.75	NA	1.10
lactic_acid	ME801033	1.75	1.76	0.00	1.11
niacinamide	ME801044	2.03	1.58	0.15	1.19
AMP	ME801032	1.86	1.63	NA	1.13
uric acid	ME800962	1.92	1.52	NA	1.19
serine	ME800960	1.73	1.91	0.18	1.10
xanthosine	ME801046	1.64	2.02	0.35	1.15
methionine	ME800983	1.56	2.19	0.00	1.26
taurine	ME800933	1.62	2.17	0.00	1.24
phosphocholine	ME800859	2.02	1.89	0.07	1.31
proline	ME800935	1.96	2.05	0.00	1.32
carnitine	ME800878	2.03	1.99	0.00	1.32
alanine	ME800972	1.97	1.98	0.04	1.34
creatine	ME801074	1.97	1.96	0.00	1.37
acetylcarnitine	ME800911	1.90	2.14	0.00	1.29
Glycerophosphocholine	ME800867	1.79	2.15	0.02	1.32
arginine	ME800912	1.84	2.03	0.00	1.39
Methionine sulfoxide	ME801056	1.81	2.03	0.00	1.24
glutamine	ME801034	1.81	1.92	0.01	1.31
Pantothenate	ME801095	1.88	1.96	0.00	1.26

Factors:

F1	Sample source:embryonic CSF \| Developmental Timepoint:E10-12.5 \| Treatment (Maternal Injection):PolyIC \| Timepoint of Collection:2.5h
F2	Sample source:embryonic CSF \| Developmental Timepoint:E10-12.5 \| Treatment (Maternal Injection):saline \| Timepoint of Collection:2.5h
F3	Sample source:mock tube \| Developmental Timepoint:- \| Treatment (Maternal Injection):- \| Timepoint of Collection:-
F4	Sample source:Pool \| Developmental Timepoint:- \| Treatment (Maternal Injection):- \| Timepoint of Collection:-

Data matrix