Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003204)

(Analysis AN005255)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8
5-Amino-levulinic acid	ME835354	NA	0.13	0.26	0.12	0.36	5.40	0.17	0.30
Glucosaminic acid	ME835394	0.97	2.63	0.37	0.06	0.20	3.60	0.04	0.14
UDP-N-acetylgalactosamine	ME835465	0.42	0.25	1.30	1.02	NA	0.34	3.19	NA
Hypoxanthine	ME835413	0.21	0.05	2.85	2.10	0.07	0.21	2.07	0.45
NADP+	ME835439	0.20	0.42	1.83	2.96	0.40	0.17	0.81	0.75
XMP	ME835467	0.37	2.13	0.34	0.33	0.40	0.16	2.46	1.53
Homogentisic acid	ME835410	3.35	1.31	1.90	0.23	0.28	0.30	0.46	0.22
Cystathionine	ME835377	1.71	1.89	1.50	1.26	0.32	0.79	0.10	0.43
5^-Methylthioadenosine	ME835430	2.31	1.89	1.62	0.27	0.37	0.60	0.22	0.71
cis-4-Hydroxy-D-proline	ME835373	1.91	1.68	0.99	0.04	NA	0.02	0.71	0.69
Inosine	ME835414	0.09	NA	0.44	0.63	0.20	0.52	2.30	2.38
Cytidine	ME835379	0.10	0.08	2.24	1.28	0.66	0.50	1.37	1.79
NADPH	ME835440	0.63	0.57	1.47	1.41	0.33	0.90	0.64	1.68
Oxidized glutathione	ME835405	0.58	0.25	1.08	1.93	0.46	1.23	0.71	1.76
1-Methyladenosine	ME835344	0.44	0.28	1.24	1.17	0.16	1.38	0.52	2.82
Threitol	ME835460	0.46	0.31	1.14	1.15	0.58	0.93	1.00	2.42
2-Amino-2-deoxy-D-mannose	ME835390	0.22	0.15	1.10	1.57	0.50	0.60	1.36	2.50
Glucosamine	ME835395	0.22	0.15	1.10	1.57	0.50	0.60	1.36	2.50
Anserine	ME835363	0.20	0.28	0.92	NA	1.10	1.58	1.33	0.52
Choline	ME835372	NA	NA	NA	0.24	0.95	1.05	1.81	0.96
Acetylcholine	ME835358	0.12	0.11	0.55	0.82	1.43	2.36	0.83	2.22
3-Dehydroxycarnitine	ME835385	0.12	0.11	0.50	0.72	1.74	2.06	0.97	1.79
Proline	ME835452	0.42	0.25	0.65	0.57	1.31	1.93	0.94	1.94
beta-Alanine	ME835368	0.24	0.11	0.59	1.29	1.59	1.93	0.55	1.70
Hypotaurine	ME835412	0.33	0.11	0.71	1.04	1.58	1.40	0.91	1.93
Taurine	ME835459	0.44	0.16	0.78	0.97	1.72	1.44	0.94	1.55
Carnitine	ME835422	0.16	0.11	0.70	1.27	1.14	1.61	1.51	1.50
N-Acetyl-D-galactosamine	ME835434	0.21	0.11	0.71	0.94	1.10	1.04	1.88	1.74
N-Acetyl-D-glucosamine	ME835435	0.24	0.12	0.73	0.97	1.13	1.07	1.94	1.79
N-Acetyl-mannosamine	ME835436	0.24	0.12	0.73	0.97	1.13	1.07	1.94	1.79
NAD+	ME835370	0.53	0.49	0.64	0.83	1.23	1.41	1.52	1.67
Trigonelline	ME835462	0.39	0.32	0.68	0.86	1.11	1.33	1.40	1.91
N-Acetylneuraminic acid	ME835437	0.68	0.67	0.59	0.30	1.18	1.33	1.89	1.35
4-Guanidinobutanoic acid	ME835353	0.53	0.27	0.35	0.30	1.28	1.79	1.56	1.93
Quinaldic acid	ME835347	0.43	0.38	0.64	0.45	1.24	1.81	1.45	1.60
Diethanolamine	ME835387	0.75	0.65	0.56	0.67	1.04	1.12	0.80	2.40
1-Methyl nicotinamide	ME835345	0.18	0.19	0.40	0.71	0.95	1.20	1.85	2.51
S-Adenosylhomocysteine	ME835455	0.22	0.18	0.30	0.33	0.78	1.67	1.49	3.03
Galactosamine	ME835393	1.73	1.76	2.22	0.57	0.37	0.07	1.20	0.08
Cystine	ME835378	1.34	0.79	2.33	0.42	0.87	0.76	1.22	0.26
5-Hydroxy-tryptophan	ME835355	1.60	0.98	2.31	0.40	0.84	0.21	1.40	0.27
Thymine	ME835461	1.50	0.85	2.02	0.21	0.48	0.39	1.60	0.42
Glutamine_13C2	ME835397	1.77	0.51	0.92	1.89	0.71	0.86	0.53	1.22
Cytosine	ME835380	1.52	1.15	1.44	0.83	0.28	0.52	1.03	1.23
Lumichrome	ME835427	1.51	0.91	1.95	1.10	0.54	0.48	0.95	0.57
Gulose	ME835407	1.40	0.83	1.63	0.97	0.92	0.66	1.02	0.58
Arginine	ME835364	1.21	0.89	1.60	0.88	0.87	0.91	1.08	0.58
Lysine	ME835428	1.24	0.82	1.79	0.76	0.88	0.90	1.11	0.50
Histamine	ME835408	1.64	0.81	1.88	0.80	0.71	0.75	1.03	0.38
Niacinamide	ME835443	1.37	0.84	1.91	0.68	0.83	0.55	1.26	0.55
D-Ornithine	ME835391	1.51	1.03	1.68	0.71	0.87	0.52	1.09	0.58
Ornithine	ME835426	1.51	1.03	1.70	0.70	0.89	0.52	1.09	0.55
Glyoxylic acid	ME835404	1.26	0.68	1.12	0.87	0.74	0.65	1.60	1.08
5-Methylcytosine	ME835356	1.21	0.79	1.40	1.03	0.74	0.77	1.06	1.00
Ethyl 3-indoleacetate	ME835392	1.37	0.67	1.09	0.98	1.18	0.75	0.97	0.99
D-Alanine_13C2	ME835383	0.92	0.81	1.45	1.04	1.20	1.14	0.88	0.56
Glutamine_13C4	ME835399	0.93	0.86	0.99	1.00	1.14	1.16	1.11	0.82
Carnosine	ME835371	1.12	0.72	1.45	0.45	1.47	0.97	1.13	0.67
Creatinine	ME835376	1.05	0.70	1.38	0.66	1.04	1.02	1.25	0.90
6-Hydroxydopamine	ME835357	1.14	0.71	1.64	0.58	0.97	0.87	1.33	0.76
Pyridoxine	ME835454	1.14	0.71	1.64	0.58	0.97	0.87	1.33	0.76
4a-Carbinolamine tetrahydrobiopterin	ME835388	0.87	1.53	0.76	1.04	0.70	0.58	1.11	1.10
N-Acetylserotonin	ME835438	1.36	1.32	0.83	0.48	1.12	0.92	0.87	1.11
Lipoamide	ME835425	0.68	0.68	1.23	1.40	1.25	0.46	0.92	1.02
3-Methylhistamine	ME835350	1.14	0.36	1.01	0.72	1.14	1.45	0.75	1.43
Adenine	ME835359	1.10	0.63	0.89	0.58	1.02	1.38	0.73	1.66
Pyridoxamine	ME835453	0.85	0.39	1.14	1.12	0.98	1.50	0.88	1.14
3-Methyladenine	ME835349	0.75	0.80	1.06	1.08	1.25	0.77	1.01	1.28
Aminoisobutyric acid	ME835346	0.74	0.64	1.10	0.92	1.30	0.83	0.93	1.54
D-Alanine_13C1	ME835382	0.67	0.88	1.27	0.94	1.07	1.20	0.75	1.21
N-METHYL-ALANINE	ME835444	0.89	0.82	1.13	0.73	1.08	1.14	0.95	1.26
3-Aminoisobutanoic acid	ME835362	0.62	0.59	0.95	1.04	1.20	1.35	0.83	1.43
Choline phosphate	ME835450	0.82	0.81	0.85	0.99	1.15	1.32	0.88	1.18
Glutamine_13C3	ME835398	0.78	0.79	0.90	1.01	1.02	1.16	1.10	1.24
1-Aminocyclopropanecarboxylic acid	ME835343	0.83	1.30	1.18	1.09	0.31	1.22	0.83	0.71
Pantothenic acid	ME835448	1.11	1.29	1.11	1.56	0.51	1.29	0.35	0.78
S-Carboxymethyl-cysteine	ME835457	0.97	0.95	1.34	NA	0.65	1.04	0.92	0.65
Isoleucine_13C2	ME835417	1.21	0.73	1.85	0.45	0.88	1.54	0.81	0.53
3-Methoxytyramine	ME835348	1.06	0.92	1.70	0.57	0.81	1.94	0.46	0.54
Kynurenine	ME835419	1.15	0.89	1.42	0.40	0.99	1.93	0.66	0.55
Histidine	ME835409	1.24	0.95	1.36	0.53	0.88	1.55	0.83	0.66
Norvaline	ME835446	1.14	1.05	1.41	0.69	0.91	1.40	0.85	0.56
Valine	ME835466	1.23	1.05	1.33	0.65	0.91	1.41	0.88	0.56
Dimethylarginine	ME835432	1.00	0.64	1.36	0.74	1.09	1.58	0.92	0.69
Leucine	ME835423	1.12	0.81	1.44	0.64	1.01	1.55	0.83	0.60
Norleucine	ME835445	1.12	0.81	1.44	0.64	1.01	1.55	0.83	0.60
Isoleucine	ME835415	1.15	0.81	1.50	0.61	0.99	1.51	0.85	0.59
Isoleucine_13C1	ME835416	1.11	0.78	1.50	0.61	1.00	1.54	0.86	0.59
Methionine	ME835429	1.09	0.85	1.32	0.60	1.00	1.72	0.74	0.67
Tyrosine	ME835464	1.08	0.87	1.34	0.65	1.06	1.56	0.78	0.66
Octopamine	ME835451	1.08	1.09	1.06	0.73	1.08	1.67	0.63	0.66
Xylose	ME835468	0.95	0.92	1.13	0.69	1.10	1.67	0.77	0.76
Citrulline	ME835374	1.12	0.90	1.25	0.51	0.98	1.64	0.70	0.89
Phenylalanine	ME835449	1.03	0.77	1.27	0.58	1.03	1.82	0.75	0.74
Tryptophan	ME835463	0.98	0.75	1.28	0.58	1.06	1.80	0.78	0.77
3-Methylhistidine	ME835351	0.76	0.71	1.62	0.62	1.08	1.88	0.64	0.69
N-6-Trimethyllysine	ME835431	0.93	0.65	1.27	0.69	1.31	1.88	0.73	0.54
Serine	ME835458	1.58	1.12	1.33	0.52	1.17	1.19	0.50	0.58
alpha-Aminoadipic acid	ME835361	1.49	0.97	1.24	0.84	0.94	1.56	0.32	0.65
Glutamine_13C1	ME835396	1.42	0.97	1.23	0.67	0.74	1.53	0.66	0.77
Alanine_13C1	ME835421	1.22	0.88	0.95	0.80	1.37	1.49	0.78	0.50
Guanidinosuccinic acid	ME835406	1.27	1.38	0.90	0.71	0.99	1.35	0.74	0.67
Allothreonine	ME835360	1.22	1.23	1.04	0.45	1.02	2.09	0.48	0.47
Homoserine	ME835411	1.22	1.23	1.04	0.45	1.02	2.10	0.48	0.47
Asparagine_15N1	ME835366	0.96	1.10	0.97	0.65	0.99	2.12	0.60	0.60
Glutamine_15N2	ME835402	1.12	0.84	0.85	0.65	0.97	2.19	0.66	0.72
4-Acetamidobutanoic acid	ME835352	0.95	0.63	1.17	0.56	0.92	2.22	1.01	0.54
N(2)-Acetyllysine	ME835441	0.91	0.78	0.96	1.11	0.80	1.88	0.87	0.70
Glutamine_13C5	ME835400	0.70	0.72	0.49	NA	1.37	1.38	NA	NA
Dihydrouracil	ME835389	0.39	0.46	0.58	1.12	2.36	2.22	0.29	0.41
Creatine	ME835375	0.33	0.20	0.95	1.23	2.52	2.48	0.16	0.13
Sarcosine	ME835456	0.44	0.32	0.89	1.04	2.23	2.48	0.23	0.37
Alanine	ME835420	0.44	0.32	0.89	1.04	2.23	2.48	0.23	0.37
D-Alanine	ME835381	0.44	0.32	0.89	1.04	2.23	2.48	0.23	0.37
Glutamine_15N1	ME835401	1.07	0.94	0.74	0.30	1.26	2.90	0.38	0.41
N6-Isopentenyladenine	ME835433	0.69	0.67	0.90	0.58	0.94	3.09	0.40	0.39
D-Alanine_15N1	ME835384	0.31	0.74	0.71	0.64	0.72	2.60	0.90	1.37
Dethiobiotin	ME835386	0.34	0.16	0.65	0.56	1.51	2.54	0.65	1.31
Betaine	ME835369	0.73	0.50	0.97	0.68	1.51	2.12	0.71	0.78
N-Formylglycine	ME835442	0.66	0.63	0.93	1.03	1.03	2.36	0.49	0.87
Isoleucine_15N1	ME835418	0.37	0.76	0.37	0.40	0.81	2.81	0.45	2.04
Leucine_15N1	ME835424	0.43	0.44	0.39	0.27	0.45	3.18	0.33	2.50
Asparagine	ME835365	0.17	0.68	0.33	1.34	0.12	1.88	0.26	3.22
Glutathione	ME835403	0.27	0.35	0.39	1.26	0.63	2.36	0.34	2.38
Asparagine_15N2	ME835367	0.15	0.35	1.19	0.96	0.24	3.98	0.26	0.33
CAR 2:0	ME835447	0.08	0.15	1.51	1.62	0.36	2.69	0.37	1.22

Factors:

F1	Sample source:Human Renal 769P Cells \| Treatment:RquA 0.5% O2
F2	Sample source:Human Renal 769P Cells \| Treatment:RquA 21% O2
F3	Sample source:Human Renal 769P Cells \| Treatment:WT 0.5% O2
F4	Sample source:Human Renal 769P Cells \| Treatment:WT 21% O2
F5	Sample source:Human Renal Caki1 Cells \| Treatment:RquA 0.5% O2
F6	Sample source:Human Renal Caki1 Cells \| Treatment:RquA 21% O2
F7	Sample source:Human Renal Caki1 Cells \| Treatment:WT 0.5% O2
F8	Sample source:Human Renal Caki1 Cells \| Treatment:WT 21% O2

Data matrix