Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003393)

(Analysis AN005567)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9	F10
DPA	ME886828	0.26	0.22	0.16	0.09	0.01	0.01	5.37	3.34	2.38	1.87
LPE161	ME886837	0.91	0.48	0.80	0.55	1.17	0.73	1.08	0.70	3.39	0.52
LPE182	ME886840	0.66	0.45	0.48	0.28	NA	NA	0.67	0.51	3.99	0.49
LPS180	ME886857	0.81	0.14	2.15	0.36	3.63	0.66	0.40	0.19	0.62	0.10
LPA180	ME886843	1.14	0.35	1.86	0.54	2.92	0.80	0.48	0.30	0.71	0.14
LPS160	ME886855	0.89	0.44	1.94	0.50	3.20	0.66	0.60	0.41	0.53	0.12
EPA	ME886829	1.18	0.76	1.76	0.61	2.26	0.73	0.70	0.55	0.55	0.33
pLPE161	ME886860	1.51	0.67	1.30	0.68	1.78	0.86	1.07	0.50	1.08	0.43
pLPE160_alkylLPE161	ME886859	1.27	0.66	1.31	0.73	2.23	0.99	0.88	0.48	0.78	0.45
pLPE181_alkylLPE182	ME886862	1.48	0.77	1.42	0.68	2.18	0.79	0.74	0.33	0.91	0.33
AA	ME886827	1.59	1.25	1.21	0.83	1.34	0.82	1.07	0.68	0.59	0.57
LPA161	ME886842	1.33	1.01	1.04	0.78	1.83	1.11	1.12	1.07	0.65	0.38
LPE180	ME886838	0.78	0.51	1.36	1.10	2.61	1.59	0.31	0.27	0.28	0.35
LPI180	ME886852	0.67	0.27	1.52	0.95	2.72	1.48	0.22	0.14	0.64	0.44
pLPE180_alkylLPE181	ME886861	0.71	0.49	1.36	0.91	2.80	1.55	0.44	0.21	0.61	0.28
LPI160	ME886850	0.75	0.50	1.37	0.85	2.53	1.34	0.70	0.38	0.73	0.37
LPI181	ME886853	0.71	0.59	1.21	1.13	2.14	1.70	0.43	0.38	0.57	0.47
LPE181	ME886839	1.04	0.71	1.42	0.93	2.25	1.39	0.45	0.34	0.46	0.35
LPS181	ME886858	0.77	0.62	1.42	0.95	2.30	1.52	0.52	0.55	0.43	0.30
LPA181	ME886844	1.06	0.58	1.11	0.98	1.77	2.25	0.67	0.54	0.50	0.28
LPA160	ME886841	1.13	0.81	1.02	0.98	1.48	1.74	1.01	0.94	0.58	0.36
Palmitic acid	ME886822	1.33	1.46	0.97	0.90	1.52	1.42	0.60	0.79	0.51	0.55
Palmitoleic acid	ME886823	1.47	1.06	1.05	0.95	1.56	1.47	0.61	0.76	0.50	0.45
Stearic acid	ME886824	0.91	0.99	1.18	0.86	1.53	1.19	0.56	0.57	0.96	0.98
LPC161	ME886832	0.91	0.74	1.25	1.02	1.74	1.31	0.84	0.66	0.52	0.61
LPE160	ME886836	0.90	0.65	1.22	0.95	2.06	1.43	0.71	0.58	0.54	0.64
LPC181	ME886834	1.04	0.91	1.30	1.13	1.76	1.46	0.45	0.40	0.41	0.41
LPC160	ME886831	0.86	0.74	1.08	1.13	1.73	1.61	0.62	0.56	0.58	0.66
LPC180	ME886833	0.89	0.80	1.14	1.19	1.81	1.68	0.50	0.47	0.47	0.48
DHA	ME886830	0.52	0.37	1.12	0.35	1.53	0.45	2.22	1.67	1.80	1.01
Linoleic acid	ME886826	1.08	0.78	1.00	0.63	1.09	0.59	1.44	1.29	1.41	1.26
oleic acid	ME886825	0.90	0.81	1.04	0.71	1.23	0.74	1.10	1.05	1.41	1.28
LPS161	ME886856	0.85	1.03	1.77	1.81	NA	NA	0.49	0.42	0.56	0.59
LPG181	ME886848	1.86	1.50	1.09	0.91	NA	NA	0.81	0.70	0.58	0.47
LPG182	ME886849	1.92	1.31	1.03	0.86	NA	NA	0.87	0.73	0.65	0.58
LPG160	ME886845	2.24	0.86	1.43	0.46	NA	NA	1.01	0.53	1.07	0.27
LPG180	ME886847	2.31	0.94	1.26	0.60	NA	NA	0.89	0.64	0.83	0.45
LPI161	ME886851	1.42	1.58	0.63	0.74	NA	NA	1.56	0.87	0.80	0.60
LPI182	ME886854	0.68	0.74	0.64	0.78	NA	NA	1.42	1.02	1.61	1.24
LPC182	ME886835	1.10	0.82	0.88	0.65	NA	NA	1.26	1.28	1.00	1.22
LPG161	ME886846	1.29	1.15	0.83	0.85	NA	NA	1.04	0.93	1.02	0.93

Factors:

F1	Genotype:Pla2g10+/+ \| Treatment:High fat diet \| Co-housing:co-housed \| Sample source:Colon
F2	Genotype:Pla2g10-/- \| Treatment:High fat diet \| Co-housing:co-housed \| Sample source:Colon
F3	Genotype:Pla2g10+/+ \| Treatment:High fat diet \| Co-housing:- \| Sample source:Colon
F4	Genotype:Pla2g10-/- \| Treatment:High fat diet \| Co-housing:- \| Sample source:Colon
F5	Genotype:Pla2g10+/+ \| Treatment:High fat diet+SCFA \| Co-housing:- \| Sample source:Colon
F6	Genotype:Pla2g10-/- \| Treatment:High fat diet+SCFA \| Co-housing:- \| Sample source:Colon
F7	Genotype:Pla2g10+/+ \| Treatment:Low fat diet \| Co-housing:co-housed \| Sample source:Colon
F8	Genotype:Pla2g10-/- \| Treatment:Low fat diet \| Co-housing:co-housed \| Sample source:Colon
F9	Genotype:Pla2g10+/+ \| Treatment:Low fat diet \| Co-housing:- \| Sample source:Colon
F10	Genotype:Pla2g10-/- \| Treatment:Low fat diet \| Co-housing:- \| Sample source:Colon

Data matrix