Clustering data with hclust algorithm for (Study ST003424)
(Analysis AN005623)| Metabolite | Structure | F1 | F2 | F3 | F4 | F5 | F6 | F7 | F8 | F9 | F10 | F11 | F12 | F13 | F14 | F15 | F16 | F17 | F18 | F19 | F20 | F21 | F22 | F23 | F24 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BMP 44:12 | ME896968 | 1.04 | 0.94 | 1.10 | NA | NA | NA | 0.00 | NA | NA | 0.12 | 0.10 | 0.15 | 0.01 | 0.01 | 0.03 | 0.01 | 0.01 | 0.01 | 1.06 | 1.11 | 1.03 | 3.66 | 4.64 | 3.97 |
| BMP 36:2 | ME896955 | 4.45 | 4.66 | 4.57 | 0.03 | 0.01 | 0.02 | 0.02 | 0.02 | 0.02 | 0.17 | 0.19 | 0.19 | 0.01 | 0.01 | 0.01 | 0.00 | NA | NA | 2.51 | 2.35 | 2.17 | 0.18 | 0.21 | 0.19 |
| BMP 38:4 | ME896958 | 1.51 | 2.58 | 3.34 | 0.00 | 0.02 | 0.00 | NA | NA | NA | 0.28 | 0.26 | 0.37 | NA | NA | 0.03 | NA | 0.01 | NA | 2.63 | 2.15 | 2.54 | 0.35 | 0.47 | 0.45 |
| BMP 36:3 | ME896956 | 2.91 | 1.62 | 1.53 | NA | NA | NA | NA | NA | NA | 0.01 | 0.01 | 0.00 | NA | NA | NA | NA | NA | NA | 2.00 | 1.94 | 1.85 | 0.06 | 0.03 | 0.04 |
| BMP 38:3 | ME896957 | 3.24 | 2.59 | 2.75 | 0.01 | 0.01 | NA | NA | NA | 0.01 | 0.03 | 0.06 | 0.06 | NA | NA | 0.00 | 0.00 | NA | NA | 2.60 | 2.66 | 2.63 | 0.08 | 0.20 | 0.07 |
| BMP 40:7 | ME896962 | 2.39 | 1.70 | 1.96 | NA | NA | NA | NA | NA | NA | 0.09 | 0.08 | 0.06 | NA | NA | NA | NA | NA | NA | 1.17 | 1.17 | 1.14 | 0.64 | 0.87 | 0.72 |
| BMP 38:6 | ME896959 | 3.14 | 2.04 | 2.20 | NA | NA | NA | NA | NA | NA | 0.22 | 0.19 | 0.23 | 0.01 | NA | NA | NA | NA | NA | 0.97 | 1.02 | 1.00 | 0.53 | 0.84 | 0.60 |
| BMP 40:6 | ME896961 | 2.83 | 2.24 | 2.50 | NA | NA | NA | NA | NA | NA | 0.26 | 0.33 | 0.38 | NA | NA | NA | NA | NA | NA | 0.57 | 0.60 | 0.58 | 0.47 | 0.70 | 0.55 |
| BMP 40:5 | ME896960 | 2.95 | 2.94 | 3.02 | NA | NA | NA | NA | NA | 0.02 | 0.43 | 0.49 | 0.49 | NA | NA | 0.02 | NA | NA | NA | 0.86 | 1.00 | 0.76 | 0.32 | 0.34 | 0.35 |
| BMP 34:2 | ME896954 | 3.00 | 2.37 | 2.60 | NA | NA | NA | NA | NA | NA | 0.00 | 0.01 | 0.04 | NA | NA | NA | NA | NA | NA | 1.37 | 1.28 | 1.30 | 0.02 | 0.00 | 0.00 |
| BMP 42:6 | ME896965 | 2.49 | 2.30 | 2.68 | NA | NA | NA | NA | NA | NA | 0.03 | 0.02 | 0.08 | NA | NA | NA | NA | NA | NA | 1.15 | 1.14 | 1.32 | 0.22 | 0.35 | 0.21 |
| BMP 42:10 | ME896964 | 2.26 | 1.78 | 2.47 | NA | NA | NA | NA | NA | NA | 0.21 | 0.00 | 0.04 | NA | NA | NA | NA | NA | NA | 0.25 | 0.28 | 0.26 | 1.15 | 2.22 | 1.08 |
| BMP 44:10 | ME896967 | 1.90 | 1.38 | 1.71 | NA | NA | NA | NA | NA | NA | 0.10 | 0.02 | 0.07 | NA | NA | NA | NA | NA | NA | 0.43 | 0.55 | 0.53 | 1.49 | 2.07 | 1.75 |
| BMP 40:8 | ME896963 | 1.59 | 1.27 | 1.50 | NA | NA | NA | NA | NA | NA | 0.02 | 0.02 | 0.09 | NA | NA | NA | NA | NA | NA | 1.18 | 1.17 | 1.16 | 1.10 | 1.71 | 1.19 |
| BMP 42:8 | ME896966 | 1.73 | 1.27 | 1.45 | 0.01 | NA | 0.02 | NA | NA | NA | 0.07 | 0.06 | 0.07 | NA | NA | NA | NA | NA | NA | 1.89 | 2.26 | 1.75 | 0.96 | 1.32 | 1.14 |
Factors:
| F1 | Genotype:CLN8 KO | Sample source:HeLa | Transfection:CLN8-HA | Replicate:1 |
| F2 | Genotype:CLN8 KO | Sample source:HeLa | Transfection:CLN8-HA | Replicate:2 |
| F3 | Genotype:CLN8 KO | Sample source:HeLa | Transfection:CLN8-HA | Replicate:3 |
| F4 | Genotype:CLN8 KO | Sample source:HeLa | Transfection:Empty vector | Replicate:1 |
| F5 | Genotype:CLN8 KO | Sample source:HeLa | Transfection:Empty vector | Replicate:2 |
| F6 | Genotype:CLN8 KO | Sample source:HeLa | Transfection:Empty vector | Replicate:3 |
| F7 | Genotype:CLN8 KO | Sample source:HeLa | Transfection:None | Replicate:1 |
| F8 | Genotype:CLN8 KO | Sample source:HeLa | Transfection:None | Replicate:2 |
| F9 | Genotype:CLN8 KO | Sample source:HeLa | Transfection:None | Replicate:3 |
| F10 | Genotype:CLN8 KO | Sample source:U2OS | Transfection:CLN8-HA | Replicate:1 |
| F11 | Genotype:CLN8 KO | Sample source:U2OS | Transfection:CLN8-HA | Replicate:2 |
| F12 | Genotype:CLN8 KO | Sample source:U2OS | Transfection:CLN8-HA | Replicate:3 |
| F13 | Genotype:CLN8 KO | Sample source:U2OS | Transfection:Empty vector | Replicate:1 |
| F14 | Genotype:CLN8 KO | Sample source:U2OS | Transfection:Empty vector | Replicate:2 |
| F15 | Genotype:CLN8 KO | Sample source:U2OS | Transfection:Empty vector | Replicate:3 |
| F16 | Genotype:CLN8 KO | Sample source:U2OS | Transfection:None | Replicate:1 |
| F17 | Genotype:CLN8 KO | Sample source:U2OS | Transfection:None | Replicate:2 |
| F18 | Genotype:CLN8 KO | Sample source:U2OS | Transfection:None | Replicate:3 |
| F19 | Genotype:Wild-type | Sample source:HeLa | Transfection:None | Replicate:1 |
| F20 | Genotype:Wild-type | Sample source:HeLa | Transfection:None | Replicate:2 |
| F21 | Genotype:Wild-type | Sample source:HeLa | Transfection:None | Replicate:3 |
| F22 | Genotype:Wild-type | Sample source:U2OS | Transfection:None | Replicate:1 |
| F23 | Genotype:Wild-type | Sample source:U2OS | Transfection:None | Replicate:2 |
| F24 | Genotype:Wild-type | Sample source:U2OS | Transfection:None | Replicate:3 |
