Clustering data with hclust algorithm for (Study ST003428)

(Analysis AN005629)
MetaboliteStructureF1F2F3F4F5F6F7F8F9F10F11F12F13F14F15F16F17F18
Cyanocobalamin 147ME8975670.100.160.180.130.100.190.150.160.710.830.800.900.610.860.000.890.1717.08
Cyanocobalamin 457ME8975680.130.160.210.150.120.120.150.110.850.771.000.680.480.44NA0.620.1715.76
Ketoglutaric 57ME8974371.540.990.791.300.800.970.726.720.500.540.470.450.600.450.080.990.290.12
Propionyl-CoA 408ME8974852.331.900.911.041.110.950.908.080.190.110.090.100.070.170.080.090.110.07
Malonyl-CoA 303ME8975731.821.571.161.641.371.931.587.160.010.010.010.010.010.010.010.010.010.02
Malonyl-CoA 408ME8974901.731.571.351.671.531.881.586.920.010.010.010.010.010.010.010.010.010.01
Citric 173ME8974532.852.021.441.521.391.351.3613.480.130.120.120.050.070.090.020.200.100.02
Ketoglutaric 101ME8974361.510.950.581.090.630.810.668.880.390.390.380.400.390.370.040.790.070.02
Succinic 73ME8974260.560.460.420.440.390.340.339.990.630.650.620.720.590.580.020.850.400.18
Succinic 99ME8974270.520.500.350.540.380.400.329.730.710.670.610.750.590.570.110.840.400.16
Oxaloacetic 87ME8974301.140.470.250.560.730.660.6812.160.140.200.170.180.100.060.170.500.060.07
Succinyl-CoA 408ME8974921.791.180.330.450.440.360.4012.670.080.070.060.080.100.060.090.040.060.05
Citric 111ME8974522.261.360.931.180.911.050.8710.560.130.060.110.040.050.050.000.15NA0.00
NADPH 408ME8974761.891.190.180.732.220.581.1510.360.000.000.000.000.000.000.000.000.000.00
Cerulenin 207ME8975402.261.020.870.661.781.110.922.090.260.280.310.460.420.320.640.450.465.55
HEPES 107ME8974560.900.930.900.971.011.030.981.080.710.780.770.900.690.610.000.770.006.96
HEPES 80ME8974550.971.010.971.020.981.050.961.130.740.800.790.930.720.650.000.800.007.23
aCD 161ME8974975.820.441.150.440.931.020.910.550.600.770.560.480.700.390.720.720.751.01
Cystine 120ME8974570.250.240.370.220.230.240.200.072.052.001.992.051.992.020.001.902.210.45
Cystine 74ME8974580.240.240.370.220.220.240.200.072.022.022.032.071.962.000.001.892.270.41
Penicillin G 289ME8974630.520.550.700.390.510.520.450.411.721.721.691.821.721.630.001.602.400.00
Penicillin G 289 POSME8975440.640.650.710.490.580.600.550.511.711.701.661.751.651.670.001.601.890.00
Urea 44ME8975030.690.660.660.540.590.610.601.311.611.631.601.851.591.540.032.300.260.01
Uric 124ME8974420.380.340.320.380.320.320.410.551.801.671.852.391.821.850.002.960.980.01
Uric 96ME8974430.340.310.300.350.290.260.380.471.541.511.652.031.561.61NA2.550.85NA
Glucose 59ME8974490.240.230.310.330.250.360.250.371.111.131.221.371.251.840.002.412.954.06
Glucose 71ME8974500.210.210.280.300.240.330.230.341.021.021.121.281.151.740.002.352.944.36
Phenol Red 195ME8974650.250.260.310.170.220.240.200.191.541.581.611.681.511.63NA1.731.542.99
Phenol Red 93ME8974640.260.270.320.180.220.240.200.191.741.751.711.901.691.720.001.821.713.12
Folic 295ME8975540.520.550.610.400.500.540.440.331.591.611.561.481.491.440.001.591.473.31
Folic 311ME8974690.370.370.450.290.340.370.320.271.631.651.621.651.561.610.011.741.573.76
Niaciamide 106ME8975160.690.680.730.500.570.580.620.641.311.331.371.471.271.200.011.421.283.97
Niaciamide 80ME8975150.750.730.800.560.620.650.680.721.361.331.361.511.311.320.001.471.332.72
Pyridoxine 134ME8975300.610.590.630.490.550.570.530.581.331.321.351.421.291.380.001.411.603.03
Pyridoxine 152ME8975290.650.630.680.520.590.610.560.621.371.391.361.451.331.420.001.441.633.12
Histidine 110 POSME8975270.600.690.831.150.861.090.870.511.231.281.291.301.251.360.001.321.441.90
Histidine 83ME8975280.570.650.791.140.821.060.830.471.231.251.291.291.251.390.001.391.492.14
Lysine 84ME8975240.670.791.051.491.151.381.160.251.061.071.111.251.141.170.000.781.062.64
Threonine 102ME8975120.600.670.791.570.891.330.980.571.051.061.081.131.051.190.001.031.183.23
Threonine 74 POSME8975110.620.680.801.510.891.300.980.591.081.091.121.141.071.210.001.071.212.97
Lauroyl-CoA 408ME8974961.662.412.661.513.531.663.251.350.020.020.040.050.030.030.020.020.030.03
Octanoyl-CoA 79ME8974933.542.852.221.992.591.882.090.490.030.040.040.090.020.030.030.030.020.03
NADH 408ME8974742.102.191.902.802.842.812.750.940.000.000.000.000.000.000.000.000.000.00
NADH 649ME8975632.152.161.832.772.862.902.641.020.000.000.000.000.000.000.000.000.000.00
Cerulenin 89ME8975413.011.171.221.042.391.561.222.900.220.310.320.470.460.350.640.510.410.07
Oleoyl-CoA (18:1) 79ME8975022.732.771.481.302.301.251.774.670.010.010.010.010.000.010.000.010.010.01
Palmitoyl-CoA (16:0) 79ME8975012.552.471.301.401.881.381.705.570.010.010.010.010.010.010.010.010.010.01
Methylcrotonyl-CoA 408ME8974892.001.661.361.891.221.641.344.460.020.010.010.010.010.010.010.010.010.01
Methylcrotonyl-CoA 79ME8974882.131.891.491.961.652.091.795.190.010.010.020.020.010.020.010.020.010.00
Adenosylcobalamin 147ME8975691.061.081.111.961.561.652.164.630.340.270.230.290.450.190.260.380.420.26
Malic 115ME8974341.501.511.771.751.951.752.054.290.190.220.340.330.300.220.010.130.020.01
Fumaric 71ME8974251.441.421.721.651.881.591.944.840.160.260.320.310.310.220.040.120.050.04
Malic 71ME8974351.461.461.731.711.951.691.984.630.190.210.320.320.310.210.010.120.020.01
GSSG 179ME8974711.251.421.051.682.082.601.702.860.000.000.000.000.000.00NA0.010.01NA
GSSG 306ME8974701.701.721.332.062.633.192.003.660.010.000.000.000.010.000.000.010.010.00
Ascorbic acid 157ME8974471.981.821.662.201.912.181.902.530.190.190.100.220.290.130.200.200.200.50
Coenzyme A 408ME8974791.992.372.061.982.282.392.412.500.000.000.000.000.000.000.000.000.000.00
Coenzyme A 79ME8974782.062.492.052.052.272.422.482.510.000.000.000.000.000.000.000.010.000.00
Alanine NEG PARME8974202.142.091.862.332.152.212.132.200.170.170.160.180.170.170.000.150.010.05
O-Acetyl-L-carnitine 145ME8975362.312.342.022.292.092.172.211.660.030.040.040.040.040.040.000.030.00NA
O-Acetyl-L-carnitine 85ME8975352.292.312.212.342.222.302.281.940.060.060.060.070.060.070.000.060.000.00
HMG-CoA 408ME8974942.662.551.601.891.761.801.694.010.010.000.010.010.000.000.000.010.000.00
Butyryl-CoA 408ME8974873.072.851.631.451.671.611.743.950.000.000.000.000.000.000.000.000.000.00
Butyryl-CoA 79ME8974863.182.811.591.481.761.681.783.990.010.010.010.010.010.000.000.010.000.01
Taurine 80ME8974292.322.241.891.762.101.711.973.200.150.160.170.200.190.210.000.070.010.00
FAD 408ME8974812.362.131.601.731.851.891.903.160.000.010.010.000.010.010.010.010.00NA
Acetyl-CoA 408ME8974832.372.361.611.571.741.601.752.660.000.000.000.000.000.000.000.000.00NA
Acetyl-CoA 461ME8974842.432.481.651.571.871.681.832.830.000.000.000.000.000.000.000.000.000.00
Acetyl-CoA 303ME8975712.712.731.841.992.091.982.072.910.000.000.000.000.000.000.000.000.000.00
Acetyl-CoA 79ME8974822.762.811.831.812.051.901.983.200.000.000.000.000.000.000.000.000.000.00
NAD+ 428ME8975622.362.201.772.011.892.071.963.400.000.000.000.000.000.000.000.000.000.00
NAD+ 524ME8975612.492.261.852.151.912.192.053.430.000.000.000.000.000.000.000.000.000.00
FAD 79ME8974802.502.361.791.962.072.062.063.490.000.000.000.010.010.010.000.000.000.00
NAD+ 540ME8974722.632.361.731.912.001.962.043.700.000.000.000.000.000.000.000.000.000.00
Palmitoleyl-CoA (16:1) 79ME8975002.122.082.051.602.591.732.263.800.010.010.010.010.010.010.010.010.010.01
Myristoyl-CoA 408ME8974992.492.701.831.382.431.592.203.520.030.020.020.020.020.020.010.020.010.02
Myristoyl-CoA 428ME8975752.492.261.361.422.331.512.053.180.010.010.000.000.010.010.010.010.010.00
Methotrexate 134ME8975570.610.621.07NA1.39NA1.320.700.86NA0.851.151.700.551.56NA1.501.01
Ascorbic acid 79ME897448NANA0.45NA1.040.570.830.781.490.801.460.680.730.811.940.960.820.96
Pemetrexed 297ME8974670.610.530.490.830.760.891.220.640.621.040.860.961.460.432.670.721.091.85
Pemetrexed 321ME8974680.86NANA0.88NA0.840.84NANA1.970.791.25NANA0.74NA0.78NA
TVB-3166 342ME8975471.260.551.510.810.960.440.861.140.922.150.450.930.35NANANANA0.70
Malonyl-CoA 428ME8975740.850.770.590.750.680.910.763.34NANANANANA0.000.00NANANA
Adenosylcobalamin 341ME8975701.561.35NA0.710.500.790.531.90NANANANA0.950.53NANANANA
NADH 348ME8975641.141.140.981.431.511.471.430.55NANA0.00NA0.00NANA0.00NANA
HMG-CoA 426ME8974951.701.560.971.121.071.181.142.580.00NA0.000.000.000.000.010.000.00NA
Acetyl-CoA 428ME8975721.571.581.071.141.181.171.231.730.000.000.000.00NANANA0.000.00NA
NAD+ 273ME8974731.281.160.830.920.980.971.001.860.00NANA0.00NANANA0.00NANA
VY-3-135 355ME8975511.311.961.060.892.100.530.520.520.651.181.150.490.970.750.801.441.19NA
Doxycycline 321ME8975550.781.180.961.170.480.621.410.711.251.070.900.910.601.380.680.920.921.84
GSK2194069 344ME8975490.481.090.550.680.671.341.251.951.460.891.150.590.881.171.071.021.081.21
Formic PARENTME8974160.770.950.820.901.021.051.101.960.921.360.640.940.710.860.501.071.002.25
Methotrexate 308ME8975560.491.051.340.870.791.261.231.710.840.970.701.001.120.710.870.930.841.60
Cysteine PARENT POSME8975130.740.490.552.611.322.271.521.300.750.760.700.760.560.790.020.740.862.36
Cysteine PARENTME8974281.701.521.351.521.331.721.531.720.180.490.510.420.420.760.041.050.462.41
Pantothenic 202ME8975391.501.391.241.641.241.571.452.610.550.570.550.590.550.520.040.520.282.22
Pyruvic 32ME8974192.101.931.511.181.591.341.641.790.740.780.580.560.530.310.000.700.001.55
Butyric PARME8974212.251.971.541.481.651.461.592.450.550.500.450.430.420.260.020.530.021.03
Methylcobalamin 147ME8975652.172.061.661.312.101.561.511.840.580.490.350.400.300.290.310.440.270.63
VY-7-137 508ME8975591.501.781.252.241.942.362.061.430.400.310.410.450.470.680.040.190.720.05
Myristic PARME8974541.421.451.502.541.862.202.011.580.380.340.410.390.360.470.150.460.360.47
Palmitoleic PARME8974601.571.451.492.761.862.332.181.760.290.250.340.340.330.420.150.340.410.04
TVB-3166 116ME8975461.731.741.921.961.241.761.572.210.710.540.640.360.240.420.150.580.180.14
C75 209ME8974592.021.791.801.641.311.951.601.710.510.430.420.490.350.370.310.370.350.87
Alanine PARENT POSME8975051.801.811.781.961.841.921.861.810.510.500.480.520.480.500.000.470.010.13
Glycine PARENT POSME8975042.182.011.632.201.772.071.821.550.350.360.350.350.340.400.040.300.270.54
Puro Heavy 121ME8975581.190.760.941.621.191.311.921.430.541.200.960.870.401.020.670.950.670.54
Aspartic 115ME8974330.620.720.891.270.961.241.002.131.141.131.131.211.151.150.001.131.180.43
Aspartic 88ME8974320.610.740.941.230.971.211.012.001.191.141.101.231.181.190.001.131.150.47
myo-Inositol 161ME8974511.501.471.331.791.571.671.462.480.570.580.570.620.570.570.000.600.570.61
Glutamic acid 128ME8974390.910.971.031.881.191.651.212.590.730.750.800.880.820.930.001.010.770.30
Asparagine 113ME8974310.971.041.172.031.291.741.362.150.820.820.790.860.810.800.000.720.870.15
Asparagine 87ME8975190.981.031.181.811.271.641.301.720.940.930.910.920.900.930.000.870.940.12
Glutamic acid 102ME8974381.001.031.071.681.211.531.242.080.830.830.880.940.860.980.001.070.840.39
Citrulline 113ME8975320.780.981.311.641.321.401.450.471.221.281.261.331.241.010.031.140.410.08
Citrulline 70ME8975310.830.971.291.581.311.441.450.431.191.201.321.241.231.110.011.220.440.09
Citrulline 131ME8974460.991.021.292.111.411.931.540.840.970.970.981.151.010.850.020.880.330.07
Ornithine 70ME8975201.121.161.301.861.401.751.491.200.940.930.951.060.910.890.011.290.070.01
Acetic PARME8974171.631.171.201.431.771.461.580.591.030.910.970.960.880.670.280.420.451.26
Riboflavin 243ME8974661.531.401.491.051.081.351.110.780.971.001.041.120.990.940.070.800.741.27
Arginine 131ME8974440.830.931.101.471.131.371.160.541.151.161.141.191.141.150.001.111.230.80
Arginine 156ME8974450.810.911.091.511.131.401.160.511.141.161.141.191.151.150.001.101.240.78
Valine 55ME8975100.951.051.171.591.231.491.280.580.940.970.981.050.981.020.000.680.952.16
Valine 72ME8975090.981.081.191.571.251.471.280.630.940.980.981.030.991.030.000.700.961.91
Glutamine 130ME8975230.981.141.241.531.241.451.290.860.970.940.950.990.900.980.010.841.071.41
Glutamine 84ME8975221.041.101.191.431.201.361.240.881.000.991.001.000.971.010.000.901.111.39
Serine 60ME8975070.941.121.311.681.391.551.421.140.930.940.940.930.940.890.000.670.930.91
Methionine 104ME8975251.141.221.311.651.351.571.391.040.870.880.880.900.880.910.000.770.911.00
Methionine 61ME8975261.111.211.311.871.401.701.431.000.820.830.840.870.830.860.000.720.870.98
Tyrosine 123ME8975340.981.051.191.861.361.661.460.870.880.910.900.910.880.920.000.750.851.33
Tyrosine 136ME8975331.021.071.191.791.351.641.450.860.900.910.930.910.880.920.000.750.891.30
Isoleucine 69ME8975170.981.091.241.661.301.551.300.840.960.980.981.010.970.990.000.781.001.08
Leucine 86ME8975180.931.041.211.681.271.571.360.780.971.020.981.010.981.010.000.721.091.03
Cysteine 76ME8975141.141.181.062.611.612.261.681.740.540.560.510.530.500.570.030.510.551.09
Palmitic PARME8974611.261.161.192.681.372.311.621.330.520.530.530.570.630.940.220.670.720.07
Biotin 227ME8975421.311.251.222.061.241.881.351.440.840.810.820.830.790.770.000.820.900.02
Stearic PARME8974621.171.161.172.261.332.041.451.190.760.630.730.730.690.900.230.700.940.28
Tryptophan 118ME8975381.201.321.462.171.572.001.620.920.670.680.680.740.650.700.000.540.691.08
Tryptophan 146ME8975371.201.301.492.071.561.941.580.940.690.710.710.740.670.720.000.560.721.08
Phenylalanine 147ME8974401.091.231.392.221.582.001.620.860.690.690.700.770.710.740.000.530.711.19
Phenylalanine 72ME8974411.031.171.322.151.501.921.560.810.660.680.690.750.690.720.000.510.691.21
Malonic 59ME8974241.051.531.061.501.701.501.761.220.860.870.840.750.810.510.480.590.620.59
Proline 70ME8975081.411.481.461.811.561.691.531.370.700.730.720.760.730.710.000.620.650.60
Fasnall 218ME8975450.620.841.240.800.982.750.711.201.061.640.860.910.960.840.460.661.100.43
TVB-2640 412ME8975521.300.901.101.541.802.441.290.710.441.340.680.620.700.381.030.470.540.55
VY-3-135 412ME8975500.781.851.371.192.991.610.971.160.480.641.150.461.081.110.230.600.440.16
Propionic PARENTME8974181.791.871.761.381.801.561.700.960.851.341.280.500.410.650.010.410.020.07
Lactic 71ME8974231.551.631.571.171.571.321.480.301.031.051.001.010.970.73NA0.280.00NA
Lactic 87ME8974221.711.771.711.271.731.441.640.331.141.171.101.131.080.800.000.310.000.00
Choline 60ME897506NANA0.050.010.030.020.070.010.02NA0.07NANA11.410.000.018.23NA
pABA 120ME8975210.140.110.411.080.360.490.290.050.280.250.800.920.912.200.060.119.330.80

Factors:

F1Sample source:BT-474 breast cancer cells | Sample Type:Intracellular | Drug Treatment:0.05 uM rotenone
F2Sample source:BT-474 breast cancer cells | Sample Type:Intracellular | Drug Treatment:0.1 uM rotenone
F3Sample source:BT-474 breast cancer cells | Sample Type:Intracellular | Drug Treatment:1 uM rotenone
F4Sample source:BT-474 breast cancer cells | Sample Type:Intracellular | Drug Treatment:20 uM rotenone
F5Sample source:BT-474 breast cancer cells | Sample Type:Intracellular | Drug Treatment:2 uM rotenone
F6Sample source:BT-474 breast cancer cells | Sample Type:Intracellular | Drug Treatment:40 uM rotenone
F7Sample source:BT-474 breast cancer cells | Sample Type:Intracellular | Drug Treatment:5 uM rotenone
F8Sample source:BT-474 breast cancer cells | Sample Type:Intracellular | Drug Treatment:Control
F9Sample source:BT-474 breast cancer cells | Sample Type:Medium | Drug Treatment:0.05 uM rotenone
F10Sample source:BT-474 breast cancer cells | Sample Type:Medium | Drug Treatment:0.1 uM rotenone
F11Sample source:BT-474 breast cancer cells | Sample Type:Medium | Drug Treatment:1 uM rotenone
F12Sample source:BT-474 breast cancer cells | Sample Type:Medium | Drug Treatment:20 uM rotenone
F13Sample source:BT-474 breast cancer cells | Sample Type:Medium | Drug Treatment:2 uM rotenone
F14Sample source:BT-474 breast cancer cells | Sample Type:Medium | Drug Treatment:40 uM rotenone
F15Sample source:BT-474 breast cancer cells | Sample Type:Medium | Drug Treatment:5 uM rotenone
F16Sample source:BT-474 breast cancer cells | Sample Type:Medium | Drug Treatment:Control
F17Sample source:NA | Sample Type:Medium | Drug Treatment:NA
F18Sample source:NA | Sample Type:QC | Drug Treatment:NA
Data matrix
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