Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003884)

HILIC POSITIVE ION MODE (Analysis AN006379)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
Urocanate	ME1026233	0.20	0.53	5.53	0.15	0.78	0.44
O-Phospho-serine	ME1026195	3.63	0.28	0.46	0.28	0.12	0.09
Ophthalmate	ME1026198	3.76	1.63	0.42	0.76	0.53	0.25
3-Phosphoglycerate	ME1026091	2.68	0.97	0.83	1.07	0.51	0.26
Aspartate	ME1026119	2.61	1.00	0.96	0.76	0.88	0.58
ADP-Glucose	ME1026106	NA	NA	NA	0.10	0.61	1.52
Hypoxanthine	ME1026167	0.16	0.32	1.01	0.18	0.67	2.90
Retinal	ME1026214	1.50	1.40	0.84	1.03	0.78	0.40
O-Phosphorylethanolamine	ME1026196	1.14	1.24	1.00	1.14	0.73	0.92
2-Deoxyadenosine	ME1026087	1.13	1.39	1.28	0.97	0.55	0.46
Taurine	ME1026221	1.19	1.59	1.44	0.77	0.82	0.80
Folic acid	ME1026148	1.26	1.38	1.20	0.71	0.92	0.58
Hypotaurine	ME1026166	1.39	1.56	1.02	0.90	0.91	0.70
UMP	ME1026231	1.21	1.59	1.04	0.92	0.92	0.74
NADP	ME1026190	1.87	1.99	1.50	0.70	0.61	0.50
N-Acetyl-methionine	ME1026183	1.34	2.54	1.40	0.78	0.63	0.17
Alanine	ME1026115	1.11	2.04	1.17	0.78	0.90	0.66
dATP	ME1026235	1.32	2.10	0.85	1.05	0.76	0.37
Phosphoenolpyruvate	ME1026207	1.62	2.18	1.12	0.79	0.68	0.30
ADP-ribose	ME1026107	0.19	1.03	1.36	0.37	1.77	0.75
NADH	ME1026189	0.04	0.66	1.74	0.75	1.31	1.23
Palmitoyl-carnitine	ME1026201	0.44	1.04	2.18	0.28	0.56	1.81
Adenosine	ME1026114	0.45	0.97	1.83	0.48	1.01	1.39
Methylnicotinamide	ME1026177	0.35	1.15	1.74	0.29	1.00	1.60
Pyridoxal	ME1026210	0.40	1.35	1.94	0.39	1.01	1.25
Lauroyl-carnitine	ME1026173	0.63	1.35	2.06	0.43	0.79	1.27
N-Acetyl-Serotonin	ME1026180	0.70	1.31	1.77	0.48	0.84	1.23
dAMP	ME1026234	0.68	1.66	1.00	1.19	0.89	0.75
S-Adenosylmethionine	ME1026219	0.57	1.92	0.86	0.68	1.38	0.79
5-Deoxy-5-(methylthio)adenosine	ME1026101	0.52	2.22	0.97	0.56	1.37	0.74
CMP	ME1026127	0.68	2.17	1.18	0.56	1.17	0.76
Adenine	ME1026113	0.85	1.42	1.07	0.69	1.33	0.80
Cystine	ME1026138	0.94	1.56	1.07	0.72	1.18	0.82
Diethanolamine	ME1026144	0.77	1.30	0.95	0.66	1.55	0.77
Coenzyme A	ME1026132	0.59	1.40	0.93	0.80	1.43	0.82
Pyridoxal 5-phosphate	ME1026211	0.72	1.58	0.80	0.74	1.42	0.75
Isoleucine	ME1026170	0.34	1.81	1.07	0.62	1.11	1.16
N-Acetylneuraminic acid	ME1026187	0.65	1.70	1.09	0.64	1.09	1.05
Thiamine	ME1026222	0.70	1.68	1.26	0.51	1.24	0.94
Glutathione	ME1026157	0.65	1.61	1.22	0.89	1.03	0.84
Pyridoxine	ME1026212	0.85	1.81	1.40	0.67	1.01	0.78
IMP	ME1026168	0.78	1.76	1.31	0.64	0.93	1.01
4-Acetamidobutyrate	ME1026094	0.80	1.61	1.26	0.63	1.09	0.95
Nicotinamide	ME1026193	0.76	1.63	1.33	0.74	1.04	0.87
2 3-cAMP	ME1026080	0.74	1.88	1.12	0.60	0.90	0.76
5-Deoxyadenosine	ME1026102	0.74	1.86	1.35	0.54	0.71	0.53
4-Quinolinecarboxylate	ME1026099	0.45	1.40	1.53	0.49	1.10	1.21
FAD	ME1026147	0.45	1.48	1.63	0.60	1.11	1.01
GDP	ME1026149	0.62	1.44	1.58	0.67	0.96	1.04
Proline	ME1026209	0.47	1.46	1.71	0.67	0.91	1.10
dGDP	ME1026236	0.81	1.34	1.49	0.78	1.03	0.87
4-Imidazoleacetate	ME1026098	0.51	1.23	1.28	0.79	1.13	1.07
Thiamine pyrophosphate	ME1026223	0.49	1.27	1.32	0.74	1.23	1.00
GDP-Mannose	ME1026150	0.52	1.34	1.46	0.77	1.19	0.89
Phenylacetaldehyde	ME1026203	0.66	1.30	1.42	0.62	1.20	0.99
Anthranilate	ME1026116	0.78	1.03	1.47	0.75	0.90	1.19
Carnitine	ME1026129	0.74	1.12	1.87	0.69	0.99	0.96
Leucine	ME1026174	0.31	1.39	1.03	0.63	1.19	1.32
4-Hydroxy-3-methoxyphenylglycol	ME1026097	0.50	1.19	1.25	0.54	1.13	1.35
Biotin	ME1026122	0.52	1.43	1.19	0.54	1.27	1.12
Guanine	ME1026160	0.50	1.44	1.20	0.51	1.25	1.17
3-Methyladenine	ME1026090	0.66	1.11	1.19	0.57	1.32	1.13
Glutaryl-carnitine	ME1026156	0.56	1.22	1.15	0.65	1.26	1.06
Methionine	ME1026176	0.38	1.01	1.05	0.74	1.27	1.28
Tryptophan	ME1026226	0.36	0.99	1.23	0.72	1.22	1.29
Pantothenate	ME1026202	0.56	1.08	0.87	0.65	1.17	1.42
Riboflavin	ME1026215	0.55	1.22	0.88	0.78	1.13	1.17
CDP-ethanolamine	ME1026126	0.78	0.80	0.73	0.89	0.97	1.47
Acetylcholine	ME1026111	0.77	0.85	0.89	0.99	1.00	1.26
Cysteinesulfinic acid	ME1026137	0.84	0.81	1.11	0.84	1.04	1.25
Homocysteic acid	ME1026164	0.80	0.98	1.03	0.81	1.02	1.27
ITP	ME1026169	0.91	0.91	1.03	0.85	0.98	1.25
2-Aminophenol	ME1026086	0.80	1.39	0.94	0.85	0.93	1.08
1-Aminocyclopropanecarboxylate	ME1026079	0.93	1.00	1.03	0.90	1.12	1.00
Hippuric acid	ME1026162	0.88	0.95	1.20	0.90	1.05	1.03
Serine	ME1026220	1.01	0.94	1.20	0.91	1.10	0.92
Threonine	ME1026224	0.62	1.22	1.08	0.90	1.21	0.93
2 4-Diaminobutyrate	ME1026081	0.68	1.06	1.21	0.73	1.06	1.23
ADP	ME1026105	0.75	1.11	1.15	0.79	0.99	1.21
3-hydroxybutanone	ME1026092	0.80	1.10	1.25	0.75	1.12	1.05
Guanosine	ME1026161	0.79	1.13	1.22	0.80	1.08	1.06
2 6-Diaminopimelic acid	ME1026082	0.89	1.14	1.12	0.86	1.03	1.00
Butyrate	ME1026123	0.82	1.14	1.09	0.80	1.10	1.08
3-Methyl-2-oxovalerate	ME1026089	0.97	1.20	1.01	0.67	1.18	1.06
2-Hydroxypyridine	ME1026088	0.75	1.28	1.17	0.70	1.23	0.97
N-Acetyl-proline	ME1026184	0.81	1.29	1.10	0.69	1.19	1.01
7 8-Dihydro-L-biopterin	ME1026104	0.45	0.80	1.47	1.22	1.02	0.94
Pyroglutamate	ME1026213	0.65	0.96	1.27	1.02	1.45	0.61
Choline	ME1026130	0.42	0.47	0.33	1.00	1.24	1.65
Lysine	ME1026175	0.45	0.31	0.34	1.00	1.54	1.42
Phenylalanine	ME1026204	0.40	0.63	0.70	0.84	1.31	1.48
CDP-choline	ME1026125	0.58	0.74	0.42	0.90	1.28	1.46
O-Succinyl-L-homoserine	ME1026197	0.49	0.65	0.41	1.03	1.44	1.20
AMP	ME1026108	0.51	0.86	1.01	0.60	1.08	1.63
GMP	ME1026151	0.38	0.65	0.75	0.51	1.05	2.05
Phosphocholine	ME1026206	1.63	1.25	0.34	0.85	1.11	0.93
Homocystine	ME1026165	1.29	0.64	0.64	1.18	0.93	1.11
Cystathionine	ME1026136	1.24	0.93	0.71	1.27	1.16	0.62
2-Aminoadipic acid	ME1026083	1.11	0.99	0.65	1.13	1.09	0.90
Glutamate	ME1026154	1.28	0.80	0.53	1.20	1.08	0.91
N-Acetyl-glutamate	ME1026181	0.46	0.71	0.32	1.63	1.11	0.89
Glutamine	ME1026155	0.88	0.16	0.14	1.56	1.58	0.77
Lactose	ME1026172	1.02	0.40	NA	1.57	1.15	0.44
Guanidineacetic acid	ME1026159	1.29	2.71	2.30	0.17	0.26	0.23
UDP	ME1026228	1.27	2.52	2.11	0.70	0.55	0.29
UDP-Glucose	ME1026229	1.39	2.72	2.00	0.74	0.51	0.15
CTP	ME1026128	1.74	2.26	2.40	0.66	0.39	0.22
UTP	ME1026232	1.70	2.67	2.40	0.61	0.33	0.14
N N N-Trimethyllysine	ME1026178	0.46	2.24	3.09	0.37	0.68	0.56
Asparagine	ME1026118	0.67	2.51	2.87	0.47	0.54	0.46
O-Acetyl-L-carnitine	ME1026194	0.45	2.57	2.74	0.34	0.50	0.78
5-Aminolevulinate	ME1026100	0.86	2.68	2.38	0.49	0.59	0.46
UDP-N-acetylgalactosamine	ME1026230	0.99	2.30	2.81	0.58	0.65	0.20
Dihydroxyacetone phosphate	ME1026145	0.40	1.90	2.46	0.75	0.87	0.28
Beta-Alanine	ME1026120	0.93	1.67	2.46	0.66	0.59	0.72
GTP	ME1026152	0.92	1.61	2.63	0.73	0.66	0.54
N-Acetylglycine	ME1026186	0.86	2.17	2.26	0.33	0.64	0.63
Pipecolate	ME1026208	0.97	2.34	2.59	0.46	0.53	0.56
NMN	ME1026192	1.04	2.06	2.61	0.37	0.48	0.69
4-Aminobutyrate (GABA)	ME1026095	0.90	2.07	2.54	0.49	0.64	0.62
Betaine	ME1026121	0.87	2.16	2.56	0.39	0.61	0.71
2-Aminoisobutyrate	ME1026085	0.60	1.99	2.33	0.55	0.73	0.75
5-Hydroxylysine	ME1026103	0.63	1.82	2.25	0.54	0.83	0.78
Deoxycarnitine	ME1026142	0.69	2.11	2.81	0.35	0.61	0.73
2-Aminoethylphosphonate	ME1026084	0.43	1.87	2.53	0.43	0.58	0.63
Cytidine	ME1026139	0.40	2.00	2.70	0.39	0.78	0.77
Arginine	ME1026117	0.54	1.90	2.66	0.55	0.71	0.69
Ornithine	ME1026199	0.48	1.84	2.82	0.48	0.70	0.75
Oxaloacetate	ME1026200	0.45	1.74	1.97	0.35	0.36	0.36
Glycerol 3-phosphate	ME1026158	0.20	1.61	1.90	0.74	1.23	0.69
Tyrosine	ME1026227	0.38	1.45	2.08	0.67	0.92	0.95
Creatinine	ME1026135	0.72	2.26	1.87	0.50	0.82	0.76
ATP	ME1026109	0.80	1.70	1.94	0.75	0.90	0.63
N-Acetyl-lysine	ME1026182	0.66	1.54	1.93	0.64	0.87	0.67
Acetyl CoA	ME1026110	0.55	1.77	1.69	0.62	1.08	0.80
Glucose 6-phosphate	ME1026153	0.67	1.76	1.90	0.61	1.09	0.64
Creatine	ME1026133	0.77	1.91	1.74	0.58	0.77	0.93
Trigonelline	ME1026225	0.82	1.82	2.02	0.56	0.75	0.86
4-Guanidinobutyrate	ME1026096	1.04	1.83	1.70	0.75	0.61	0.85
NAD	ME1026188	0.84	1.81	1.66	0.73	0.89	0.72
Ribulose-5-phosphate	ME1026217	0.81	2.25	1.68	0.70	0.78	0.19
D-Glyceraldehyde-3-phosphate	ME1026141	0.57	2.47	1.85	0.70	1.18	0.17
Ribose 5-phosphate	ME1026216	0.71	2.60	1.72	0.47	0.96	0.23
S-Adenosyl-homocysteine	ME1026218	1.27	1.81	2.14	0.45	0.66	0.76
Deoxycytidine	ME1026143	1.21	2.08	1.69	0.38	0.37	0.37
Acetylputrescine	ME1026112	1.52	2.35	1.61	0.44	0.80	0.52
CDP	ME1026124	1.09	2.33	1.81	0.51	0.82	0.55
Cytosine	ME1026140	1.27	2.35	1.97	0.57	0.62	0.52
N-Acetyl-Galactosamine	ME1026179	1.07	1.97	1.75	0.56	0.75	0.60
NADPH	ME1026191	1.32	1.99	1.72	0.79	0.71	0.47
Creatine phosphate	ME1026134	1.43	2.38	3.68	0.32	0.20	0.20
3-methyl-histidine	ME1026093	0.19	2.31	4.48	0.23	0.36	0.42
Phenylethanolamine	ME1026205	0.35	1.47	3.20	0.32	1.01	0.66
Histidine	ME1026163	0.31	1.66	3.37	0.53	0.51	0.78
N-Acetyl-serine	ME1026185	0.50	1.84	3.64	0.39	0.67	0.43
Citrulline	ME1026131	0.33	2.14	3.70	0.36	0.51	0.55
Dimethyl-arginine	ME1026146	0.34	1.92	3.46	0.31	0.67	0.64
Kynurenine	ME1026171	0.26	2.09	3.49	0.33	0.58	0.65

Factors:

F1	Genotype:KP \| Time (H):24
F2	Genotype:KP \| Time (H):48
F3	Genotype:KP \| Time (H):72
F4	Genotype:PGKP \| Time (H):24
F5	Genotype:PGKP \| Time (H):48
F6	Genotype:PGKP \| Time (H):72

Data matrix