Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003887)

HILIC NEGATIVE ION MODE (Analysis AN006385)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
C12 PARENT_Glycine	ME1027310	1.39	1.46	1.81	0.55	0.26	0.36
C12 PARENT_Serine	ME1027360	0.21	1.70	1.92	0.40	0.22	0.19
C13-label-1_Glycine	ME1027311	0.88	1.54	1.71	0.16	0.27	0.30
C13-label-1_Serine	ME1027362	0.71	2.11	1.60	0.22	0.23	0.24
C13-label-2_Serine	ME1027363	0.04	2.58	1.42	0.09	0.29	0.13
C13-label-6_Aconitate	ME1027247	NA	1.58	0.93	NA	NA	0.32
C13-label-1_Alanine	ME1027241	0.72	1.09	1.01	1.90	0.90	0.97
C13-label-1_Tyrosine	ME1027373	0.50	1.43	0.88	1.61	0.77	0.99
C12 PARENT_3-Hydroxybutyrate	ME1027236	1.68	0.85	1.06	1.85	0.90	1.03
C12 PARENT_Phenylalanine	ME1027344	1.67	0.88	1.00	1.71	0.91	1.07
C12 PARENT_Asparagine	ME1027251	1.20	1.29	0.87	2.22	1.06	0.85
C13-label-8_Tryptophan	ME1027371	1.52	1.17	0.91	1.82	1.26	0.77
C13-label-2_Cystine	ME1027278	1.43	0.65	1.24	0.64	0.79	1.10
C12 PARENT_Lysine	ME1027325	1.20	0.75	1.11	0.82	0.80	1.16
C12 PARENT_Cystine	ME1027276	1.11	0.70	1.18	0.54	0.65	1.22
C13-label-1_Cystine	ME1027277	1.15	0.72	1.23	0.72	0.61	1.15
C13-label-2_Arginine	ME1027249	1.37	1.02	0.96	0.56	0.98	1.04
C13-label-2_Tyrosine	ME1027374	1.34	0.91	1.10	0.65	0.84	1.05
C13-label-2_Lysine	ME1027327	0.92	0.85	1.11	0.49	0.70	1.16
C13-label-1_Ornithine	ME1027337	1.11	0.90	1.11	0.60	0.91	1.01
C13-label-3_Tyrosine	ME1027375	1.02	0.86	1.08	0.61	0.95	1.05
C12 PARENT_Citrulline	ME1027270	1.05	0.92	1.01	0.52	0.87	1.14
C13-label-1_Arginine	ME1027248	1.04	0.96	1.07	0.51	0.89	1.04
C13-label-1_Creatine	ME1027273	0.83	1.09	1.05	0.08	1.00	0.93
C13-label-1_Glutamine	ME1027300	0.89	0.76	1.12	0.19	0.86	1.15
C13-label-1_Glucose	ME1027284	1.37	0.88	1.13	0.07	0.90	1.03
C13-label-2_Leucine	ME1027315	1.24	0.80	1.12	0.13	0.88	1.10
C12 PARENT_Malate	ME1027328	0.61	0.78	1.12	0.88	0.90	1.09
C13-label-1_Glycerate	ME1027305	0.58	0.76	1.09	0.82	0.82	1.19
C13-label-1_Glycerate_2nd Peak	ME1027308	0.57	0.75	1.10	0.82	0.82	1.19
C12 PARENT_Aconitate	ME1027242	0.58	0.87	1.06	0.71	0.90	1.11
C12 PARENT_Glucose	ME1027283	0.71	0.89	1.05	0.76	0.98	1.05
C12 PARENT_Pyridoxine	ME1027353	0.69	0.88	1.04	0.69	1.04	1.04
C13-label-1_Asparagine	ME1027252	0.68	0.85	1.12	1.13	0.85	1.07
C13-label-1_Taurine	ME1027365	0.82	0.70	1.10	1.13	0.83	1.18
C12 PARENT_Glycerate	ME1027304	1.04	0.83	1.02	0.97	0.92	1.12
C12 PARENT_Uracil	ME1027377	0.83	0.92	1.12	0.84	0.86	1.03
C13-label-1_Inositol	ME1027320	0.88	0.75	1.12	0.99	0.87	1.12
C12 PARENT_Methionine	ME1027333	0.80	0.81	1.09	0.93	0.91	1.09
C13-label-1_Aspartate	ME1027255	0.88	0.87	1.04	0.97	0.96	1.07
C12 PARENT_Leucine	ME1027313	0.88	1.10	0.88	0.91	1.03	1.05
C13-label-2_Asparagine	ME1027253	0.78	1.01	0.90	0.83	1.19	1.00
C13-label-5_Isocitrate	ME1027267	0.91	1.03	0.92	0.82	1.18	0.97
C13-label-2_Isocitrate	ME1027264	0.73	1.14	0.93	0.99	1.21	0.87
C12 PARENT_Aspartate	ME1027254	0.66	1.11	1.05	0.79	0.98	0.92
C12 PARENT_Fumarate	ME1027383	0.73	1.10	0.98	0.87	1.06	0.94
C12 PARENT_Isocitrate	ME1027268	0.63	0.96	1.07	1.28	1.14	0.88
C13-label-4_Isocitrate	ME1027266	0.74	1.05	0.95	1.08	0.93	1.07
C12 PARENT_2-Hydroxybutyric acid	ME1027234	0.55	1.01	1.01	1.13	1.02	0.99
C13-label-2_Pyridoxine	ME1027355	0.60	0.94	1.05	1.18	0.95	1.03
C13-label-3_Isocitrate	ME1027265	1.46	1.10	0.95	0.86	1.10	0.90
C12 PARENT_Valine	ME1027381	1.55	0.81	1.03	0.90	0.86	1.15
C13-label-5_Glucose	ME1027287	1.59	0.91	0.81	1.06	1.14	1.13
C13-label-1_Cytidine	ME1027280	1.10	0.63	1.01	1.04	1.24	1.00
C13-label-1_Isocitrate	ME1027269	1.06	1.10	0.88	1.48	1.18	0.93
C13-label-2_Threonine	ME1027368	1.09	1.01	0.86	1.34	1.16	1.00
C13-label-3_Glucose	ME1027285	1.36	0.92	1.05	1.24	0.96	0.99
C13-label-2_Cytidine	ME1027281	1.34	0.92	0.89	1.49	1.07	1.04
C12 PARENT_Proline	ME1027347	1.37	0.91	1.06	1.51	0.90	1.02
C13-label-4_Glucose	ME1027286	1.35	0.86	1.04	1.49	0.97	1.02
C12 PARENT_Creatine	ME1027272	1.14	0.97	1.00	1.09	1.07	0.97
C13-label-1_Proline	ME1027348	1.00	1.06	1.02	1.17	0.92	0.99
C12 PARENT_Ornithine	ME1027336	1.05	0.99	1.09	1.07	0.95	0.94
C13-label-1_Citrulline	ME1027271	0.96	0.94	1.02	1.11	0.99	1.02
C13-label-1_2-Hydroxybutyric acid	ME1027235	1.04	0.92	1.01	1.28	1.02	1.01
C13-label-2_Phenylalanine	ME1027346	1.16	0.94	1.02	1.31	0.87	1.07
C13-label-6_Glucose	ME1027288	1.13	1.00	0.99	1.28	0.86	1.07
C12 PARENT_Taurine	ME1027364	1.22	1.00	1.01	1.12	0.90	1.04
C12 PARENT_Glycerate_2nd Peak	ME1027307	1.17	0.87	1.10	1.21	0.94	1.00
C12 PARENT_Lactate	ME1027321	1.09	0.94	1.04	1.15	0.95	1.02
C13-label-1_Pyridoxine	ME1027354	1.10	0.88	1.06	1.11	0.90	1.06
C12 PARENT_Alanine	ME1027238	1.08	0.95	1.06	1.18	0.84	1.05
C13-label-1_Methionine	ME1027334	1.06	0.88	1.12	1.19	0.87	1.02
C13-label-1_Valine	ME1027382	1.23	0.80	1.14	1.27	0.77	1.10
C13-label-1_Lysine	ME1027326	1.11	0.76	1.19	1.17	0.74	1.10
C13-label-1_Threonine	ME1027367	1.17	0.77	1.13	1.12	0.79	1.12
C13-label-1_Phenylalanine	ME1027345	1.18	0.78	1.14	1.21	0.80	1.08
C12 PARENT_Tryptophan	ME1027369	1.18	0.74	1.14	1.18	0.84	1.10
C13-label-1_Tryptophan	ME1027370	1.19	0.76	1.14	1.19	0.83	1.09
C13-label-1_Leucine	ME1027314	1.32	0.95	1.02	1.37	0.84	1.08
C13-label-1_Isoleucine	ME1027317	1.29	0.85	1.05	1.39	0.88	1.08
C13-label-2_Isoleucine	ME1027318	1.29	0.82	1.09	1.31	0.85	1.08
C12 PARENT_Glutamine	ME1027299	1.29	0.70	1.12	1.33	0.85	1.12
C12 PARENT_Threonine	ME1027366	1.20	0.78	1.05	1.28	0.88	1.13
C13-label-3_Citrate	ME1027261	0.51	1.91	0.55	0.53	1.08	0.58
C13-label-5_Citrate	ME1027263	0.64	1.96	0.65	0.81	0.90	0.72
C13-label-2_Glycerate	ME1027306	0.62	1.11	0.85	1.35	1.43	0.93
C13-label-1_Citrate	ME1027259	0.94	1.51	0.78	1.39	1.18	0.79
C13-label-4_Citrate	ME1027262	0.87	1.59	0.80	1.17	1.10	0.78
C13-label-4_Malate	ME1027332	0.43	1.43	0.84	0.80	1.29	0.75
C12 PARENT_Isoleucine	ME1027316	0.70	1.57	0.70	0.74	1.26	0.82
C13-label-2_Glutamine	ME1027301	0.84	1.43	0.90	0.75	1.07	0.81
C13-label-2_Glycine	ME1027312	0.11	2.42	0.94	0.11	0.91	0.31
C13-label-3_Serine	ME1027361	NA	2.72	0.81	0.01	0.85	0.29
C13-label-2_Citrate	ME1027260	0.59	2.41	0.56	0.40	1.24	0.49
C13-label-2_Aspartate	ME1027256	0.22	2.38	0.48	0.12	1.49	0.46
C13-label-3_Aspartate	ME1027257	NA	2.22	0.56	0.19	1.10	0.46
C13-label-3_Proline	ME1027350	NA	1.46	0.64	NA	1.42	0.49
C13-label-2_Glutamate	ME1027295	0.01	1.44	0.85	0.01	1.62	0.60
C13-label-3_Glutamate	ME1027296	0.04	1.61	0.84	0.05	1.64	0.50
C13-label-4_Proline	ME1027351	NA	1.57	0.72	NA	1.13	0.43
C13-label-2_Aconitate	ME1027244	0.03	1.68	0.74	0.03	1.31	0.66
C13-label-2_Malate	ME1027330	0.04	1.70	0.68	0.05	1.41	0.74
C13-label-3_Pyruvate	ME1027359	0.00	1.61	0.90	0.00	1.32	0.64
C13-label-4_Glutamate	ME1027297	NA	1.66	0.92	NA	1.38	0.44
C12 PARENT_Creatine phosphate	ME1027274	NA	1.72	0.65	NA	1.68	0.51
C13-label-2_Proline	ME1027349	0.09	1.89	0.58	0.10	1.60	0.61
C13-label-5_Glutamate	ME1027298	0.10	1.81	0.93	0.09	1.47	0.38
C12 PARENT_Pyruvate	ME1027356	0.08	1.92	0.74	0.08	1.38	0.56
C13-label-1_Pyruvate	ME1027357	0.05	2.09	0.70	0.11	1.44	0.46
C13-label-2_Pyruvate	ME1027358	NA	2.08	0.71	0.00	1.30	0.49
C12 PARENT_Orotate	ME1027339	NA	0.98	1.18	NA	0.81	0.95
C13-label-2_Lactate	ME1027323	0.02	1.17	1.01	0.02	0.81	1.09
C13-label-3_Lactate	ME1027324	0.03	0.99	1.03	0.02	1.08	1.02
C13-label-3_N-carbamoyl-aspartate	ME1027291	NA	0.79	1.25	NA	1.07	0.90
C13-label-4_Glutamine	ME1027302	NA	1.42	0.60	NA	1.00	0.67
C13-label-5_Glutamine	ME1027303	NA	1.38	0.73	NA	0.90	0.86
C13-label-4_Aconitate	ME1027245	0.09	1.33	0.83	NA	1.22	0.75
C13-label-3_Fumarate	ME1027386	NA	1.33	0.96	NA	1.02	0.77
C13-label-2_Alanine	ME1027239	NA	1.43	0.94	0.06	1.03	0.81
C13-label-3_Alanine	ME1027240	0.01	1.41	0.93	0.01	1.04	0.89
C13-label-2_Fumarate	ME1027385	NA	1.48	0.85	NA	1.17	0.68
C13-label-3_Malate	ME1027331	0.03	1.61	0.89	0.03	1.10	0.73
C13-label-4_Methionine	ME1027335	NA	1.18	1.10	0.29	1.07	0.75
C13-label-1_Orotate	ME1027340	0.13	1.20	1.20	0.01	1.05	0.70
C13-label-5_Proline	ME1027352	NA	1.12	1.15	NA	1.01	0.56
C13-label-4_Orotate	ME1027343	NA	1.39	0.96	NA	0.93	0.54
C13-label-2_Orotate	ME1027341	NA	1.40	1.04	NA	1.13	0.57
C13-label-3_Orotate	ME1027342	NA	1.43	1.19	NA	1.09	0.48
C13-label-5_Cytidine	ME1027282	NA	0.61	1.11	NA	1.46	0.92
C13-label-5_N-carbamoyl-aspartate	ME1027292	NA	0.78	0.70	NA	1.17	1.36
C13-label-2_Uracil	ME1027379	0.07	0.91	1.75	0.12	0.97	0.45
C13-label-3_Uracil	ME1027380	0.20	0.96	1.47	0.46	1.06	0.57
C13-label-1_N-carbamoyl-aspartate	ME1027290	NA	0.64	1.40	1.08	0.86	1.07
C12 PARENT_Arginine	ME1027250	0.12	0.78	0.95	0.77	0.93	1.27
C12 PARENT_Tyrosine	ME1027372	0.13	0.69	1.09	0.84	0.85	1.23
C12 PARENT_Citrate	ME1027258	0.47	1.34	0.83	0.47	1.23	0.87
C13-label-2_Ornithine	ME1027338	0.37	1.27	0.98	0.30	1.27	0.71
C13-label-5_Aconitate	ME1027246	0.24	1.44	0.88	0.33	1.20	0.65
C13-label-1_Aconitate	ME1027243	0.25	1.06	1.06	0.55	0.87	1.03
C13-label-1_Uracil	ME1027378	0.37	0.96	1.27	0.32	0.85	0.90
C12 PARENT_N-carbamoyl-aspartate	ME1027289	0.27	1.14	0.82	0.64	1.34	0.93
C13-label-1_Fumarate	ME1027384	0.44	1.09	0.87	0.65	1.18	1.00
C13-label-1_Malate	ME1027329	0.79	1.02	0.99	0.38	1.13	0.96
C13-label-4_Tyrosine	ME1027376	0.51	1.05	0.97	0.48	1.01	1.05
C13-label-1_Glutamate	ME1027294	0.64	1.06	1.06	0.42	1.00	0.94
C13-label-1_Lactate	ME1027322	0.60	0.99	1.08	0.55	1.12	0.89
C13-label-3_Glycerate_2nd Peak	ME1027309	0.69	1.09	1.00	0.57	1.08	0.93
C13-label-1_3-Hydroxybutyrate	ME1027237	3.68	0.85	0.99	3.55	0.78	1.00
C12 PARENT_Glutamate	ME1027293	1.39	1.23	0.60	2.95	0.81	1.28
C12 PARENT_Cytidine	ME1027279	2.59	0.61	1.09	2.54	0.73	1.14
C12 PARENT_Inositol	ME1027319	2.40	1.55	0.69	2.66	1.16	0.75

Factors:

F1	Medium:Control \| \| Genotype:Fresh Medium control
F2	Medium:Control \| \| Genotype:KP
F3	Medium:Control \| \| Genotype:PGKP
F4	Medium:woSer/Gly \| \| Genotype:Fresh Medium no Ser/Gly
F5	Medium:woSer/Gly \| \| Genotype:KP
F6	Medium:woSer/Gly \| \| Genotype:PGKP

Data matrix