Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003891)

HILIC POSITIVE ION MODE (Analysis AN006392)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8
Acetyl-arginine_C13-label-1	ME1029726	NA	0.63	0.80	0.05	0.86	NA	NA	3.06
Adenosine_C13-label-2	ME1029659	0.97	0.97	NA	1.00	NA	1.22	0.91	NA
Glutathione_C13-label-2	ME1029746	0.94	NA	1.23	NA	NA	0.96	0.80	NA
Acetyl-arginine_C12 PARENT	ME1029725	0.71	0.67	2.02	0.72	0.95	0.44	0.58	1.90
Glutathione_C12 PARENT	ME1029745	0.25	0.76	2.31	0.89	0.32	0.61	1.43	1.48
Methionine_C13-label-2	ME1029685	0.65	1.08	1.15	NA	1.17	NA	NA	1.16
Adenosine_C13-label-10	ME1029658	NA	0.67	0.89	1.15	0.85	NA	1.23	1.35
Carnitine_C12 PARENT	ME1029720	0.78	0.17	0.69	1.72	1.73	0.56	1.11	1.42
4-Pyridoxic acid_C13-label-5	ME1029647	1.54	0.82	0.59	0.34	0.67	2.12	1.54	0.95
Proline_C13-label-3	ME1029703	0.60	0.71	1.14	0.24	0.38	1.80	1.35	0.53
Creatine_C12 PARENT	ME1029706	1.03	1.58	1.66	1.07	0.40	0.96	0.34	0.99
Hypotaurine_C12 PARENT	ME1029713	0.48	0.81	0.94	1.26	1.01	0.84	0.86	1.76
Ornithine_C13-label-1	ME1029758	0.75	0.71	0.70	0.96	1.18	0.90	0.72	1.92
Histamine_C13-label-1	ME1029719	0.95	1.04	0.80	0.54	1.21	0.82	0.67	1.77
Ornithine_C12 PARENT	ME1029755	0.77	1.06	0.83	0.75	0.95	0.91	0.62	1.89
Acetyl proline_C12 PARENT	ME1029645	1.05	0.67	0.94	0.61	0.74	1.23	0.99	1.64
Citrulline_C13-label-2	ME1029737	1.10	1.06	0.36	0.88	0.64	1.24	0.70	1.66
1-Methylhistidine_C12 PARENT	ME1029643	1.10	1.24	0.69	0.64	0.91	1.14	0.72	1.38
Citrulline_C12 PARENT	ME1029735	0.98	0.98	0.68	0.78	1.04	1.16	0.70	1.50
Pipecolate_C12 PARENT	ME1029697	1.01	1.02	0.74	0.82	0.82	1.08	1.00	1.41
Thiamine_C13-label-1	ME1029705	0.99	0.92	0.65	0.82	0.97	1.01	0.95	1.57
Dimethyl-arginine_C12 PARENT	ME1029753	0.78	1.41	0.52	0.73	0.77	0.76	0.86	1.98
Creatinine_C13-label-1	ME1029665	0.99	0.94	0.69	0.86	0.64	0.88	0.70	2.19
Creatinine_C13-label-2	ME1029666	1.04	0.85	0.60	0.67	0.63	1.01	0.62	2.33
4-Pyridoxic acid_C12 PARENT	ME1029646	0.79	0.93	0.68	0.69	0.82	0.60	0.96	2.38
Uridine_C12 PARENT	ME1029661	0.88	0.75	0.76	0.86	0.81	0.69	0.80	2.36
Creatinine_C12 PARENT	ME1029664	1.35	0.70	0.99	0.42	1.03	0.97	1.26	1.26
Citrulline_C13-label-3	ME1029738	0.91	1.06	0.91	1.01	NA	1.01	0.99	1.00
Alanine_C13-label-1	ME1029710	0.82	1.11	1.12	0.75	0.64	1.41	1.11	0.89
Alanine_C13-label-2	ME1029711	0.74	1.22	1.31	0.70	0.44	1.25	1.48	0.79
Proline_C13-label-2	ME1029702	0.67	1.08	1.29	0.72	0.40	1.48	1.48	0.61
Glutamine_C12 PARENT	ME1029727	0.75	1.37	1.22	0.43	0.68	0.88	1.25	1.27
N-Acetylglycine_C12 PARENT	ME1029686	1.10	0.93	1.18	0.66	0.66	0.96	1.24	1.27
Proline_C13-label-1	ME1029701	0.92	0.89	1.20	0.74	0.63	1.22	1.18	1.13
Adenosine_C12 PARENT	ME1029656	1.63	1.03	0.47	1.16	1.55	0.85	1.09	0.40
Adenosine_C13-label-1	ME1029657	1.01	1.51	0.47	1.01	1.05	0.83	1.05	0.42
Glutamate_C13-label-3	ME1029744	1.27	1.13	0.88	1.09	1.10	1.20	1.01	0.39
Creatine_C13-label-1	ME1029707	1.00	1.57	0.74	1.01	1.31	0.81	0.31	1.14
Glycerol 3-phosphate_C13-label-3	ME1029750	0.74	1.60	0.64	1.32	1.47	0.74	0.41	0.61
Creatine phosphate_C12 PARENT	ME1029751	0.76	0.87	0.89	1.42	1.38	0.92	0.77	1.06
Creatine phosphate_C13-label-1	ME1029752	1.04	0.78	0.83	1.28	1.44	0.77	0.93	1.12
Thiamine_C12 PARENT	ME1029704	1.01	0.95	0.82	1.47	0.86	0.68	0.91	1.45
Aspartate_C12 PARENT	ME1029747	0.71	1.10	0.72	1.27	1.01	0.91	0.78	1.42
Taurine_C13-label-1	ME1029696	0.91	0.87	0.67	1.09	1.25	0.97	0.83	1.34
Glutamine_C13-label-4	ME1029731	1.63	0.83	0.65	1.40	1.18	0.63	0.89	1.07
Phenylalanine_C13-label-1	ME1029676	1.18	0.77	1.05	0.98	1.25	1.01	0.61	1.14
Citrulline_C13-label-1	ME1029736	1.38	0.97	0.61	1.04	1.37	0.83	0.63	1.21
trans-4-Hydroxy-L-proline_C13-label-1	ME1029715	1.41	0.86	0.65	1.07	1.20	0.87	0.94	1.15
Tryptophan_C13-label-1	ME1029673	1.35	0.99	0.96	1.03	1.30	0.81	0.78	0.88
Threonine_C12 PARENT	ME1029716	1.14	1.13	0.73	0.98	1.28	0.93	0.82	0.97
Arginine_C13-label-1	ME1029757	1.29	1.16	0.66	1.16	1.27	0.86	0.70	0.95
Creatine_C13-label-2	ME1029708	1.23	1.26	0.83	1.13	1.22	0.86	0.63	0.88
Isoleucine_C12 PARENT	ME1029681	1.46	1.77	0.58	0.93	0.72	0.92	0.81	0.95
Trimethylglycine (Betaine)_C13-label-1	ME1029688	1.12	1.36	0.38	0.89	0.96	1.04	1.13	1.05
Nicotinamide_C13-label-2	ME1029650	1.04	1.48	0.72	0.90	0.96	1.49	0.87	0.82
Nicotinamide_C12 PARENT	ME1029648	1.10	1.47	0.44	0.89	1.08	1.16	0.62	1.07
Nicotinamide_C13-label-1	ME1029649	1.08	1.42	0.52	1.04	0.96	1.25	0.54	1.05
Choline_C13-label-1	ME1029693	0.89	1.59	1.02	1.26	0.73	0.86	0.67	0.99
Glutamine_C13-label-3	ME1029730	1.06	1.31	0.83	0.95	0.64	1.25	1.17	0.76
Pyridoxal_C13-label-1	ME1029663	0.83	1.55	1.07	1.18	0.63	0.85	1.04	0.88
Glutamine_C13-label-2	ME1029729	0.83	1.40	0.92	1.03	0.73	1.08	1.09	0.87
Pyridoxal_C12 PARENT	ME1029662	0.89	1.50	1.00	0.99	0.74	0.91	0.98	0.96
Alanine_C13-label-3	ME1029712	0.95	1.42	0.97	0.83	0.62	1.05	1.10	1.01
Serine_C13-label-1	ME1029733	0.88	1.39	0.94	0.85	0.76	1.10	0.89	1.07
Glutamate_C13-label-1	ME1029742	0.74	1.25	1.02	1.13	0.98	0.80	1.00	1.08
Glycerol 3-phosphate_C13-label-1	ME1029749	0.53	1.35	1.15	1.05	0.88	0.68	0.97	1.36
Glycerol 3-phosphate_C12 PARENT	ME1029748	0.73	1.50	0.91	0.73	0.93	0.92	0.84	1.27
Tyrosine_C12 PARENT	ME1029690	0.98	1.34	0.86	0.96	1.07	0.93	1.00	0.82
Acetyl-tryptophan_C13-label-1	ME1029654	0.94	1.46	0.98	0.85	1.13	0.80	0.57	1.00
Tryptophan_C13-label-2	ME1029674	0.96	1.47	0.92	0.97	1.04	0.78	0.75	1.07
Arginine_C12 PARENT	ME1029756	1.41	0.96	0.84	1.33	0.79	1.05	0.77	0.99
Methionine_C12 PARENT	ME1029683	1.37	0.86	0.57	1.21	0.86	1.24	0.59	1.32
Asparagine_C12 PARENT	ME1029734	0.85	1.20	0.88	0.98	0.90	1.04	0.77	1.28
Histidine_C12 PARENT	ME1029739	0.78	1.01	1.00	1.12	0.73	1.12	0.83	1.34
Acetyl-tryptophan_C12 PARENT	ME1029653	0.95	1.07	1.12	0.83	1.09	1.09	0.58	1.14
Glutamate_C12 PARENT	ME1029741	0.70	1.00	1.19	1.10	1.08	0.95	0.62	1.29
Proline_C12 PARENT	ME1029700	1.28	0.93	1.32	1.09	0.58	1.04	0.96	0.94
Glutamine_C13-label-1	ME1029728	1.11	0.75	0.97	1.14	0.86	1.15	0.91	1.14
2-Hydroxypyridine_C13-label-1	ME1029652	1.26	0.97	1.12	0.87	0.99	1.01	0.92	0.90
Carnitine_C13-label-2	ME1029722	1.19	1.02	1.20	0.94	0.79	1.22	0.65	0.98
Cytosine_C13-label-1	ME1029668	1.22	0.88	1.19	0.95	0.93	1.05	0.73	1.07
Choline_C13-label-2	ME1029694	1.19	1.31	1.05	1.09	0.94	1.03	0.49	0.90
Phenylalanine_C12 PARENT	ME1029675	1.29	1.05	1.02	0.88	0.94	1.27	0.46	1.02
Histamine_C12 PARENT	ME1029718	1.19	1.16	0.92	0.70	0.87	0.91	0.92	1.28
Pipecolate_C13-label-1	ME1029698	1.22	1.09	0.88	0.92	0.75	0.92	1.03	1.24
trans-4-Hydroxy-L-proline_C12 PARENT	ME1029714	1.33	1.07	0.85	0.99	0.82	1.03	0.79	1.15
Trimethylglycine (Betaine)_C12 PARENT	ME1029687	1.23	1.03	0.90	0.90	0.88	1.00	0.85	1.21
Trimethylglycine (Betaine)_C13-label-2	ME1029689	1.09	1.06	0.82	1.02	0.85	1.16	0.85	1.10
Dimethyl-arginine_C13-label-1	ME1029754	1.18	1.22	0.96	0.89	0.90	1.06	0.70	1.06
Serine_C12 PARENT	ME1029732	1.17	1.13	0.87	0.94	0.91	1.13	0.73	1.08
Tryptophan_C12 PARENT	ME1029672	1.21	1.18	0.86	1.13	0.95	0.91	0.76	1.05
Methionine_C13-label-1	ME1029684	1.20	1.16	0.76	1.15	0.92	1.02	0.88	0.96
Xylose_C12 PARENT	ME1029680	1.20	1.16	0.76	1.15	0.92	1.02	0.88	0.96
Choline_C12 PARENT	ME1029692	1.07	1.32	0.91	1.02	0.79	1.06	0.76	1.04
Isoleucine_C13-label-1	ME1029682	1.01	1.38	0.85	1.01	0.96	0.94	0.83	0.99
2-Hydroxypyridine_C12 PARENT	ME1029651	1.10	1.06	0.94	1.12	0.78	1.16	0.97	0.90
Alanine_C12 PARENT	ME1029709	1.13	1.24	0.78	0.97	0.82	1.31	0.72	0.95
Deoxycytidine_C12 PARENT	ME1029669	1.22	1.24	0.94	0.99	0.92	1.12	0.82	0.76
1-Methylhistidine_C13-label-1	ME1029644	1.21	1.39	0.93	0.47	0.83	1.28	0.75	0.96
Cytosine_C12 PARENT	ME1029667	1.05	1.16	1.19	0.50	1.03	1.12	0.86	0.97
Glutamate_C13-label-2	ME1029743	0.96	0.89	1.02	0.90	1.17	1.27	0.94	0.78
Histidine_C13-label-1	ME1029740	0.76	0.76	0.80	0.86	1.25	1.25	1.02	1.14
Deoxycytidine_C13-label-1	ME1029670	1.07	1.11	1.02	0.35	1.60	0.99	0.92	0.83
Leucine_C12 PARENT	ME1029678	1.11	1.05	0.83	0.47	1.43	1.09	0.82	1.02
Leucine_C13-label-1	ME1029679	0.94	1.22	0.87	0.74	1.41	1.04	0.63	0.98
Phenylalanine_C13-label-2	ME1029677	0.87	1.14	0.99	0.87	1.44	1.00	0.71	0.93
Threonine_C13-label-1	ME1029717	1.06	0.99	0.74	0.72	1.21	1.13	0.85	1.15
Taurine_C12 PARENT	ME1029695	0.94	1.31	0.72	0.79	1.10	0.98	0.95	1.10
Tyrosine_C13-label-1	ME1029691	1.14	1.18	0.73	0.72	1.25	0.79	0.97	1.15
Glycine_C13-label-1	ME1029724	1.06	1.32	1.07	1.07	0.60	0.70	1.51	0.73
Carnitine_C13-label-1	ME1029721	1.35	1.23	1.41	1.20	0.96	0.76	0.70	0.60
Glycine_C12 PARENT	ME1029723	1.07	1.06	1.15	1.42	0.85	0.92	0.96	0.73

Factors:

F1	Diet:Control \| \| Genotype:KP
F2	Diet:Control \| \| Genotype:PGKP
F3	Diet:Control \| \| Genotype:PolG
F4	Diet:Control \| \| Genotype:wt
F5	Diet:Ser/Gly free \| \| Genotype:KP
F6	Diet:Ser/Gly free \| \| Genotype:PGKP
F7	Diet:Ser/Gly free \| \| Genotype:PolG
F8	Diet:Ser/Gly free \| \| Genotype:wt

Data matrix