Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003973)

(Analysis AN006542)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9	F10
Glucono-1,5-lactone 6-phosphate	ME1049561	0.85	12.94	0.45	0.37	0.24	0.18	0.31	0.63	0.09	0.30
6-Phospho-D-gluconate	ME1049565	0.55	6.30	0.37	0.41	0.50	0.59	0.23	0.30	0.31	0.42
Galactitol	ME1049548	0.11	0.10	0.84	0.47	0.13	0.15	4.05	3.84	0.14	0.15
GDP-L-fucose 1	ME1049572	0.65	0.81	0.72	0.88	1.47	1.88	0.07	0.07	1.26	4.31
Fucose 1-phosphate	ME1049560	0.59	0.79	0.83	0.94	3.04	2.38	1.18	1.40	0.41	0.47
Lactaldehyde	ME1049514	1.51	1.51	0.29	0.29	0.39	0.41	2.39	2.43	0.36	0.42
Galactonate	ME1049553	1.11	2.98	0.70	0.81	0.78	0.80	0.60	1.09	0.56	0.56
Deoxyribose 2*	ME1049531	0.68	1.85	0.38	0.74	0.37	0.93	1.39	2.28	0.25	0.77
Dihydroxy-isovalerate 1	ME1049530	0.66	1.87	0.37	0.70	0.36	0.91	1.38	2.26	0.25	0.80
glyceraldehyde3p/DHAP	ME1049542	0.37	1.36	0.38	0.80	0.60	1.56	0.52	2.72	0.45	1.24
Hexose phosphates	ME1049563	0.54	1.72	0.43	1.05	0.64	1.24	0.79	1.76	0.50	1.34
Stachyose	ME1049574	0.33	2.31	0.29	1.21	0.33	1.58	0.23	1.86	0.17	0.99
cis-2-Methylaconitate	ME1049550	1.45	0.46	0.86	0.48	1.24	0.76	1.66	0.71	1.80	0.57
Homo-cisaconitate	ME1049551	1.45	0.46	0.86	0.48	1.24	0.76	1.66	0.71	1.81	0.58
UDP-N-acetylglucosamine	ME1049573	0.64	1.33	1.28	1.69	0.96	1.51	0.30	0.58	0.47	1.12
Homocitrate 1	ME1049556	1.02	1.00	1.31	1.34	0.67	0.69	1.39	1.34	0.61	0.63
Methylcitrate 2	ME1049555	1.05	1.03	1.19	1.24	0.69	0.71	1.43	1.38	0.63	0.65
Pantothenate	ME1049558	1.00	1.22	0.71	0.79	0.53	0.68	1.68	2.08	0.41	0.56
Tartronate semialdehyde	ME1049519	0.84	0.86	0.84	0.84	0.86	0.87	1.75	1.98	0.57	0.59
2-Oxoisocaproate 2*	ME1049526	1.09	1.06	0.07	0.13	1.06	1.09	1.65	1.65	1.06	1.06
3-Methyl-2-oxopentanoate 1	ME1049527	0.84	0.80	0.08	0.14	1.09	1.12	1.78	1.83	1.12	1.12
malate	ME1049529	0.92	1.07	0.55	0.53	0.92	0.99	0.58	0.67	1.47	2.30
Cis-aconitate	ME1049543	1.40	1.37	0.94	0.90	0.55	0.61	0.92	0.86	1.06	1.37
fumarate	ME1049521	1.18	1.12	0.95	0.94	1.01	1.04	0.46	0.43	1.38	1.49
Methylglyoxal	ME1049513	1.12	1.13	0.71	0.75	0.90	0.93	0.79	0.83	1.33	1.50
Glycerate	ME1049520	1.00	1.11	0.50	0.53	0.89	0.98	1.04	1.24	0.95	1.76
Isopropylmalate	ME1049544	0.84	1.34	0.36	0.46	0.95	1.37	0.94	1.40	0.90	1.43
ketoglutarate	ME1049533	0.84	0.93	0.46	0.47	1.16	1.31	1.08	1.32	1.01	1.44
Pyruvate	ME1049515	0.97	1.05	0.83	0.87	1.02	1.12	0.78	0.85	0.75	1.76
D-Ribulose 5-phosphate/Ribose 5-phosphate/Xylulose 5-phosphate	ME1049559	0.80	1.34	0.62	0.79	0.87	1.25	0.88	1.28	0.65	1.53
Glucosamine phosphate +	ME1049562	0.73	1.52	0.59	0.95	0.84	1.21	1.00	1.05	0.65	1.43
phophoenolpyruvate	ME1049541	0.96	0.68	1.20	0.77	1.08	1.01	1.42	1.10	0.93	0.84
Mannosylglycerate	ME1049564	0.78	0.80	0.93	1.06	1.02	1.13	0.96	1.15	1.07	1.10
meso-2,6-Diaminopimelate	ME1049577	0.86	1.07	0.84	1.01	1.15	1.47	0.81	1.15	0.75	0.90
Propanoyl phosphate 2	ME1049535	0.84	0.83	1.01	1.09	1.17	1.27	1.08	1.18	0.72	0.82
Propionyl phosphate 1	ME1049534	0.84	0.83	1.01	1.09	1.17	1.27	1.08	1.18	0.72	0.82
2-Deoxy-D-ribose 1-phosphate	ME1049557	0.82	1.15	0.71	0.86	0.84	1.02	1.13	1.45	0.80	1.23
2-Oxoisovalerate	ME1049523	0.88	0.87	0.71	0.70	0.84	0.86	1.37	1.41	1.17	1.20
Acetolactate	ME1049528	0.88	0.89	0.72	0.73	0.89	0.91	1.36	1.38	1.10	1.13
Ethyl malate 2	ME1049539	1.04	1.22	0.77	0.79	0.95	1.10	0.97	1.18	0.95	1.03
2-Dehydro-3-deoxy-L-rhamnonate	ME1049537	1.05	1.23	0.77	0.79	0.96	1.11	0.96	1.11	0.97	1.05
Dimethylmalate 1	ME1049538	1.05	1.23	0.79	0.81	0.96	1.11	0.95	1.10	0.97	1.05
Citrate	ME1049552	0.96	0.96	0.93	0.91	1.10	1.18	1.06	1.06	0.88	0.96
succinate	ME1049522	0.96	1.05	0.79	0.79	1.16	1.24	0.93	1.05	0.91	1.13
Glucose 2	ME1049546	1.07	1.21	1.02	1.01	0.91	1.03	0.88	1.02	0.87	0.98
2, 5-Dioxopentanoate 2	ME1049524	1.18	1.18	0.90	0.83	0.84	0.89	1.02	0.98	1.01	1.17
methylmaleate 1	ME1049525	1.19	1.19	0.90	0.84	0.83	0.88	1.02	0.98	1.00	1.17
Galactono-1	ME1049545	1.12	1.20	0.57	0.57	1.05	1.06	0.98	1.10	1.18	1.17
lactate	ME1049516	1.01	0.95	0.82	0.75	1.13	1.02	0.96	0.95	0.90	1.50
2-Oxobutanoate 2	ME1049518	0.90	0.99	0.67	0.69	1.09	1.20	0.98	1.15	1.01	1.33
succinate semialdehyde 1	ME1049517	0.90	1.00	0.67	0.68	1.09	1.20	0.98	1.15	1.00	1.32
3-Hydroxy-3-methyl-2-oxobutanoate	ME1049532	1.46	0.96	0.35	0.56	0.98	1.09	1.09	1.30	0.75	0.87
3,4-Dihydroxy-2-butanone 4-phosphate	ME1049549	0.79	1.11	0.59	0.79	1.09	1.35	1.23	1.72	0.59	0.76
Isopropylmaleate	ME1049536	1.01	1.28	0.55	0.64	1.04	1.35	1.05	1.32	0.78	0.99
Phosphopantothenate	ME1049568	0.86	1.39	0.59	0.97	0.90	1.48	0.87	1.41	0.51	0.92
Dephospho CoA	ME1049576	0.76	0.73	0.32	0.30	1.33	1.65	0.72	0.67	1.14	1.28
UDP-N-acetylmuramate	ME1049575	0.76	0.90	0.34	0.48	1.33	1.15	0.90	0.90	1.03	1.32
Homovanillate	ME1049547	0.90	0.99	0.99	0.85	1.70	1.47	0.67	0.64	0.86	0.90
Erythrose 4-phosphate	ME1049554	0.98	1.21	0.61	0.74	1.32	1.52	0.77	0.83	1.02	0.96
Phenylpyruvate	ME1049540	0.71	1.07	0.78	0.97	1.28	1.72	0.77	0.88	0.74	1.10
UDP-glucose/UDP-D-galactose	ME1049571	0.77	1.15	0.80	1.08	1.34	1.66	0.52	0.76	0.80	1.13
hexose diphosphate	ME1049570	0.76	1.72	0.35	0.38	0.66	1.30	0.52	0.68	0.70	1.95
N-Acetyl-alpha-D-glucosamine 1-phosphate	ME1049578	0.98	1.80	0.44	0.68	0.95	1.57	0.55	1.19	0.70	1.13
N-Acetyl-D-glucosamine 6-phosphate	ME1049569	0.94	1.76	0.44	0.68	0.98	1.60	0.56	1.21	0.70	1.14
D-Glycero-D-Manopyranose-7-Phosphate 2	ME1049567	0.95	1.80	0.71	0.97	0.86	1.28	0.39	0.75	0.96	1.34
Sedoheptulose 7-phosphate 1	ME1049566	0.97	1.83	0.71	0.98	0.87	1.30	0.39	0.75	0.91	1.30

Factors:

F1	Sample source:extensively drug-resistant strain \| treatment:Control
F2	Sample source:extensively drug-resistant strain \| treatment:Trehalose
F3	Sample source:multidrug-resistant strain \| treatment:Control
F4	Sample source:multidrug-resistant strain \| treatment:Trehalose
F5	Sample source:Rifampicin-resistant strain \| treatment:Control
F6	Sample source:Rifampicin-resistant strain \| treatment:Trehalose
F7	Sample source:sensitive strain \| treatment:Control
F8	Sample source:sensitive strain \| treatment:Trehalose
F9	Sample source:totally drug-resistant strain \| treatment:Control
F10	Sample source:totally drug-resistant strain \| treatment:Trehalose

Data matrix