Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003978)

(Analysis AN006552)

Metabolite	Structure	F1	F2
Adenylosuccinate	ME1050156	0.43	2.14
XMP	ME1050144	NA	1.00
Quinate	ME1050124	NA	1.00
Dodecanedioate	ME1050133	NA	1.00
Benzoate	ME1050090	NA	1.00
2-Furoate	ME1050086	NA	1.00
3-Hydroxypropionate	ME1050082	NA	1.00
N-Acetylglucosamine 1-phosphate	ME1050137	1.19	0.81
2PG	ME1050065	1.20	0.80
ADP-glucose	ME1050168	1.20	0.80
FAD	ME1050175	1.17	0.83
Pantothenate	ME1050132	1.15	0.85
2-Hydroxyglutarate	ME1050074	1.15	0.85
cis-Aconitate	ME1050071	1.15	0.85
3PG	ME1050064	1.16	0.84
UDP-N-acetylglucosamine	ME1050170	1.16	0.84
Isobutyryl CoA	ME1050150	1.11	0.84
Citrate	ME1050070	1.13	0.87
Malate	ME1050077	1.13	0.87
Ru5P	ME1050079	1.01	0.99
N-Acetylaspartate	ME1050113	1.00	1.00
UDP-glucose	ME1050166	1.00	1.00
Malonate	ME1050084	1.06	0.94
3-Hydroxy-3-methylglutarate	ME1050107	1.06	0.94
G1P	ME1050056	1.06	0.94
F1,6P	ME1050059	1.05	0.95
Glucuronate	ME1050126	1.05	0.95
NADP+	ME1050174	1.04	0.96
3-Indoxyl sulfate	ME1050131	1.02	0.98
N-Acetylglucosamine 6-phosphate	ME1050136	1.03	0.97
Sorbitol 6-phosphate	ME1050134	1.03	0.97
Phosphonoacetate	ME1050101	1.03	0.88
Fumarate	ME1050076	1.10	0.90
UDP-glucuronate	ME1050167	1.09	0.91
GDP-mannose	ME1050169	1.39	0.61
N-Acetyl-beta-alanine	ME1050097	1.40	0.60
G6P	ME1050057	1.41	0.59
S7P	ME1050081	1.41	0.59
3-Hydroxybutyrate	ME1050085	1.48	0.52
Threonate	ME1050100	1.48	0.52
5-Oxoproline	ME1050092	1.47	0.53
Acetyl CoA	ME1050069	1.47	0.53
Citramalate	ME1050104	1.43	0.57
6-Phosphogluconate	ME1050078	1.45	0.55
N-Acetylmethionine	ME1050123	1.45	0.55
3-Methylbutanoate	ME1050083	1.08	0.69
Saccharate	ME1050130	1.09	0.64
Isocitrate	ME1050072	1.23	0.77
Phenaceturate	ME1050125	1.24	0.76
Urate	ME1050110	1.27	0.73
N-Acetylleucine	ME1050112	1.25	0.75
NAD+	ME1050172	1.26	0.74
NADH	ME1050173	1.26	0.74
Folate	ME1050154	1.30	0.70
2-Oxoglutarate	ME1050073	1.30	0.70
DHAP	ME1050060	1.30	0.70
F6P	ME1050058	1.32	0.68
PRPP	ME1050147	1.33	0.67
Carbamoylaspartate	ME1050114	1.33	0.67
PEP	ME1050066	1.33	0.67
O-Phosphoserine	ME1050119	0.48	1.52
Adenosine 3^,5^-diphosphate	ME1050152	0.59	1.41
N-Acetylneuraminate	ME1050138	0.54	1.46
GDP	ME1050155	0.56	1.44
IMP	ME1050142	0.55	1.45
GTP	ME1050163	0.98	1.02
NADPH	ME1050145	0.97	1.03
dCTP	ME1050157	0.97	1.03
dTTP	ME1050158	0.97	1.03
Isethionate	ME1050091	0.93	1.07
N-Acetylglutamate	ME1050122	0.95	1.05
N-Acetylphenylalanine	ME1050129	0.95	1.05
N-Formylmethionine	ME1050116	0.96	1.15
R5P	ME1050080	0.85	1.08
Hexanoate	ME1050089	0.91	1.09
CDP-choline	ME1050164	0.86	1.14
CMP-N-acetylneuraminate	ME1050171	0.86	1.14
CTP	ME1050159	0.89	1.11
ATP	ME1050162	0.87	1.13
Decanoate	ME1050111	0.88	1.12
UTP	ME1050160	0.88	1.12
CoA	ME1050146	0.72	1.28
AMP	ME1050141	0.72	1.28
Azelate	ME1050121	0.72	1.28
Heptanoate	ME1050096	0.67	1.33
CMP	ME1050139	0.70	1.30
4-Acetylbutyrate	ME1050095	0.68	1.32
Octanoate	ME1050103	0.68	1.32
UMP	ME1050140	0.69	1.31
Ethanolamine phosphate	ME1050102	0.69	1.31
Sebacate	ME1050128	0.69	1.31
UDP	ME1050149	0.77	1.23
2,3-DPG	ME1050063	0.76	1.24
CDP	ME1050148	0.75	1.25
Citraconate	ME1050093	0.75	1.25
Undecanoate	ME1050120	0.83	1.17
Glutarate	ME1050098	0.84	1.16
Pelargonate	ME1050106	0.84	1.16
4-Oxopentanoate	ME1050087	0.82	1.18
Succinate	ME1050075	0.81	1.19
Dodecanoate	ME1050127	0.81	1.19
GMP	ME1050143	0.81	1.19
ADP	ME1050153	0.79	1.21
Phthalate	ME1050109	0.80	1.20
Terephthalate	ME1050108	0.80	1.20
N-Acetylmuramate	ME1050135	1.00	NA
Malonyl CoA	ME1050151	1.00	NA
Hippurate	ME1050117	1.00	NA
G3P	ME1050062	1.00	NA
Dihydroorotate	ME1050105	1.00	NA
dATP	ME1050161	1.00	NA
Allantoate	ME1050115	1.00	NA
2-Hydroxy-4-methylpentanoate	ME1050099	1.00	NA
ADP-ribose	ME1050165	1.00	NA
2-Oxoisopentanoate	ME1050088	1.76	0.24
4-Methyl-2-oxopentanoate	ME1050094	1.72	0.28
Lactate	ME1050068	1.73	0.27
Pyruvate	ME1050067	1.63	0.37
Glycerophosphate	ME1050061	1.58	0.42
Homovanillate	ME1050118	1.58	0.42

Factors:

F1	Sample source:3T3-L1 \| Treatment:si-Ctr
F2	Sample source:3T3-L1 \| Treatment:si-Idh3b

Data matrix