Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST004038)

HILIC NEGATIVE ION MODE (Analysis AN006676)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9	F10	F11	F12	F13	F14	F15
Glucose 6-phosphate/Fructose 6-phosphate	ME1071929	0.76	NA	0.49	NA	0.33	NA	0.21	6.66	0.08	0.24	0.03	NA	NA	NA	NA
13C3-Phosphoglyceric acid	ME1071936	0.03	NA	0.08	NA	0.11	NA	0.04	0.03	0.10	8.52	0.04	NA	NA	NA	NA
13C6-Fructose 1,6-bisphosphate	ME1071932	0.00	NA	0.00	NA	0.00	NA	0.03	0.04	0.06	8.80	0.02	NA	NA	NA	NA
Fructose 1,6-bisphosphate	ME1071931	0.02	NA	0.02	NA	0.02	NA	0.46	0.96	0.88	5.96	0.21	NA	NA	NA	NA
13C6-Glucosamine 6-phosphate	ME1072011	0.33	NA	0.91	NA	0.72	NA	0.29	0.33	0.27	5.63	0.21	NA	NA	NA	NA
13C6-Glucose 6-phosphate/13C6-Fructose 6-phosphate	ME1071930	0.35	NA	0.81	NA	0.69	NA	0.40	0.37	0.25	5.53	0.18	NA	NA	NA	NA
Phosphoglyceric acid	ME1071935	0.75	NA	0.28	NA	0.32	NA	0.27	0.10	0.40	6.35	0.25	NA	NA	NA	NA
13C3-Glyceraldehyde 3-phosphate/13C3-Dihydroxyacetone phosphate	ME1071934	0.21	NA	0.46	NA	0.54	NA	0.44	0.07	0.26	6.51	0.08	NA	NA	NA	NA
13C3-Phosphoenolpyruvic acid	ME1071938	0.31	NA	0.51	NA	0.55	NA	0.38	0.29	0.03	6.12	0.41	NA	NA	NA	NA
13C3-Lactic acid	ME1071940	0.13	0.06	5.49	0.07	5.89	0.08	1.00	0.35	0.74	1.71	0.18	0.08	0.06	0.04	0.04
13C3-Succinic acid	ME1071970	0.02	0.11	4.59	1.02	5.39	0.57	1.30	0.25	0.61	0.14	0.01	0.59	0.27	0.18	0.06
13C5-Citric acid/Isocitric acid	ME1071947	0.03	0.12	5.42	0.40	5.11	0.32	1.22	0.34	1.70	0.14	0.08	0.26	0.17	0.16	0.06
13C5-cis-Aconitic acid	ME1071953	0.29	1.58	1.04	3.85	1.49	2.91	0.17	0.17	0.18	0.10	1.71	1.41	0.24	0.19	0.08
13C4-Malic acid	ME1071979	0.04	0.32	0.47	3.26	0.49	2.75	0.09	0.04	0.04	0.04	0.04	3.13	1.86	1.03	0.18
13C4-Succinic acid	ME1071971	0.00	0.61	0.62	4.25	0.73	2.57	0.08	0.01	0.04	0.00	0.00	2.76	1.21	0.74	0.31
13C4-Aspartic acid	ME1071997	0.00	0.46	0.62	2.10	0.59	2.37	0.13	0.06	0.12	0.01	0.00	3.30	1.91	1.14	0.74
13C4-Fumaric acid	ME1071975	0.06	0.19	1.46	2.36	1.54	2.21	0.75	0.17	0.34	0.13	0.02	2.22	1.53	0.81	0.23
13C3-Glutamic acid	ME1071991	0.01	0.02	1.10	2.82	1.10	2.54	0.45	0.19	0.34	0.08	0.01	2.28	1.48	1.18	0.66
13C4-Citric acid/Isocitric acid	ME1071946	0.01	0.16	1.02	3.24	0.94	2.40	0.47	0.17	0.63	0.11	0.03	2.02	1.46	1.37	0.46
13C4-cis-Aconitic acid	ME1071952	0.04	1.04	0.13	3.09	0.18	3.88	0.06	0.01	0.07	0.02	0.02	2.36	1.37	1.39	0.92
13C8-Oxidized glutathione	ME1072008	0.00	0.01	0.02	4.28	0.03	4.08	0.00	0.00	0.00	0.00	0.00	1.96	1.84	1.23	0.56
13C3-Glutamine	ME1071986	0.05	0.20	0.39	4.46	0.38	4.62	0.18	0.13	0.31	0.01	0.01	1.55	0.91	0.71	0.85
13C6-Oxidized glutathione	ME1072006	0.00	0.09	0.15	4.44	0.17	4.82	0.04	0.00	0.04	0.02	0.01	1.68	1.44	1.22	0.65
13C6-Glucose	ME1071928	1.92	NA	0.13	NA	0.05	NA	0.52	0.76	0.39	3.45	1.25	NA	NA	NA	NA
Aspartic acid	ME1071994	2.46	1.97	0.48	0.37	0.43	0.42	1.25	1.64	1.03	1.24	2.87	0.40	0.25	0.25	0.31
Glutamine	ME1071984	2.76	1.21	0.15	0.50	0.15	0.53	1.35	2.52	1.60	2.67	1.27	0.23	0.12	0.15	0.21
13C3-2-Oxoglutaric acid	ME1071961	0.27	0.00	2.24	0.19	2.05	0.16	3.34	1.52	2.31	0.93	0.14	0.18	0.07	0.05	0.01
13C4-Oxaloacetic acid	ME1071983	0.24	0.13	3.35	0.04	3.24	0.14	3.44	0.26	1.96	0.17	0.04	0.08	0.09	0.04	0.04
Glucose	ME1071927	2.84	NA	1.58	NA	1.51	NA	1.15	0.13	0.14	0.40	0.10	NA	NA	NA	NA
13C4-Glutamic acid	ME1071992	0.00	NA	3.09	NA	3.05	NA	0.90	0.28	0.68	0.09	0.00	NA	NA	NA	NA
13C3-cis-Aconitic acid	ME1071951	0.29	NA	2.33	NA	2.84	NA	0.88	0.19	1.29	0.17	0.14	NA	NA	NA	NA
13C5-Oxidized glutathione	ME1072005	0.16	NA	2.55	NA	2.87	NA	0.88	0.16	0.83	0.47	0.20	NA	NA	NA	NA
13C4-2-Oxoglutaric acid	ME1071962	0.02	NA	2.60	NA	2.36	NA	1.20	0.50	0.89	0.22	0.01	NA	NA	NA	NA
13C3-Citric acid/Isocitric acid	ME1071945	0.07	NA	2.09	NA	2.03	NA	1.14	0.58	1.44	0.41	0.09	NA	NA	NA	NA
13C4-Glutamine	ME1071987	0.11	NA	2.31	NA	2.21	NA	1.06	0.64	1.28	0.19	0.14	NA	NA	NA	NA
13C2-Glutamic acid	ME1071990	0.18	NA	1.67	NA	1.52	NA	1.57	0.77	1.14	0.47	0.11	NA	NA	NA	NA
13C4-Oxidized glutathione	ME1072004	0.26	NA	1.93	NA	1.69	NA	1.31	0.26	1.23	0.65	0.36	NA	NA	NA	NA
13C6-N-Acetylglucosamine 1-phosphate/13C6-N-Acetyl-glucosamine 6-phosphate	ME1072015	0.56	NA	1.91	NA	1.72	NA	1.26	0.27	1.06	0.36	0.61	NA	NA	NA	NA
13C8-N-Acetylglucosamine 1-phosphate/13C8-N-Acetyl-glucosamine 6-phosphate	ME1072016	1.54	NA	1.93	NA	1.78	NA	1.02	0.15	0.76	0.42	0.17	NA	NA	NA	NA
13C8-UDP-N-acetylglucosamine	ME1072020	0.84	NA	1.53	NA	2.15	NA	0.88	0.33	1.43	0.72	0.25	NA	NA	NA	NA
Glyceraldehyde 3-phosphate/Dihydroxyacetone phosphate	ME1071933	1.87	NA	0.93	NA	0.85	NA	1.05	0.18	0.49	2.33	0.26	NA	NA	NA	NA
Phosphoenolpyruvic acid	ME1071937	2.15	NA	0.73	NA	0.67	NA	0.83	0.41	1.06	1.48	0.83	NA	NA	NA	NA
13C11-UDP-N-acetylglucosamine	ME1072021	0.81	NA	0.78	NA	1.99	NA	0.81	1.19	0.49	1.52	0.65	NA	NA	NA	NA
13C2-Glutamine	ME1071985	0.51	NA	0.79	NA	0.78	NA	1.39	1.50	1.68	0.72	0.25	NA	NA	NA	NA
13C2-2-Oxoglutaric acid	ME1071960	1.29	NA	1.04	NA	0.74	NA	1.27	0.95	0.84	0.71	0.88	NA	NA	NA	NA
13C2-Glutathione	ME1071999	0.95	NA	0.81	NA	0.50	NA	1.49	0.29	1.19	1.19	1.08	NA	NA	NA	NA
13C4-Glutathione	ME1072001	0.34	NA	1.32	NA	1.17	NA	1.29	0.27	1.28	1.28	0.76	NA	NA	NA	NA
13C6-UDP-N-acetylglucosamine	ME1072019	0.59	NA	0.87	NA	1.04	NA	1.45	0.71	0.78	1.19	0.64	NA	NA	NA	NA
13C3-Aspartic acid	ME1071996	0.04	0.07	2.94	0.80	2.82	0.85	1.63	1.12	1.49	0.34	0.04	1.03	0.60	0.37	0.20
13C3-Malic acid	ME1071978	0.03	0.15	3.58	1.33	3.69	1.11	1.01	0.20	0.73	0.13	0.02	1.35	0.76	0.41	0.14
Lactic acid	ME1071939	2.37	0.81	1.55	2.00	1.24	1.73	1.28	0.12	0.30	0.19	0.13	1.05	0.72	0.67	0.51
13C2-cis-Aconitic acid	ME1071950	0.32	0.28	1.79	1.99	1.62	2.49	1.18	0.47	1.62	0.45	0.05	0.95	0.64	0.67	0.35
13C2-Citric acid/Isocitric acid	ME1071944	0.13	0.13	1.33	2.41	1.03	1.85	1.38	0.67	1.68	0.65	0.16	1.05	0.84	0.87	0.39
13C3-Fumaric acid	ME1071974	0.22	0.64	2.04	2.94	2.10	2.23	0.69	0.23	0.22	0.17	0.11	1.35	0.78	0.64	0.60
13C2-Malic acid	ME1071977	0.11	0.08	2.26	1.98	2.12	1.66	1.40	0.37	0.98	0.34	0.06	1.39	0.83	0.51	0.13
13C2-Succinic acid	ME1071969	0.21	0.12	1.88	2.52	1.94	1.96	1.27	0.39	0.62	0.35	0.13	1.62	0.50	0.38	0.24
Oxaloacetic acid	ME1071980	3.99	2.51	0.53	0.67	0.39	0.56	0.78	0.39	0.47	0.79	0.77	1.09	0.70	1.12	0.38
Oxidized glutathione	ME1072003	3.95	2.82	0.68	0.28	0.26	0.14	1.86	0.25	0.86	0.50	1.48	0.77	0.16	0.27	0.09
Acetyl-CoA	ME1071941	2.16	2.38	0.28	1.41	0.22	1.96	0.54	0.43	0.22	1.55	0.65	0.82	0.61	0.94	1.49
UDP-N-acetylglucosamine	ME1072017	2.84	2.85	0.13	1.50	0.07	1.45	0.53	0.60	0.37	0.60	0.40	1.19	0.69	0.87	1.16
13C2-Succinyl-CoA	ME1071965	1.66	1.48	0.25	1.73	0.15	1.45	0.75	0.64	1.92	0.53	0.61	1.10	0.95	1.01	0.92
Succinyl-CoA	ME1071964	1.54	1.59	0.46	1.23	0.23	0.87	1.23	0.98	0.97	0.65	1.23	1.05	0.63	1.09	0.96
N-Acetylglucosamine 1-phosphate/N-Acetyl-glucosamine 6-phosphate	ME1072013	1.05	0.97	0.72	2.49	0.48	2.28	0.77	0.54	0.41	1.39	0.60	1.03	0.84	0.95	0.69
13C3-Succinyl-CoA	ME1071966	1.82	1.69	0.38	2.17	0.27	2.16	0.41	1.26	0.35	0.15	0.29	1.44	0.83	0.96	0.96
13C4-Succinyl-CoA	ME1071967	1.31	1.23	0.43	2.36	0.38	2.24	0.49	0.70	0.39	0.24	0.56	1.34	1.15	1.13	1.24
N-Acetylglucosamine	ME1072012	1.34	1.30	0.50	2.17	0.61	2.32	0.53	0.66	0.53	0.54	0.75	1.25	0.94	0.85	0.92
cis-Aconitic acid	ME1071949	1.22	3.32	0.40	1.90	0.37	2.20	0.60	0.42	0.70	0.40	0.41	0.95	0.68	1.00	0.87
2-Oxoglutaric acid	ME1071959	1.13	2.37	0.76	1.54	0.66	1.33	1.04	0.60	0.83	0.69	0.61	1.42	0.66	0.65	0.25
Citric acid/Isocitric acid	ME1071943	0.75	2.07	0.37	2.37	0.28	1.72	0.78	0.60	0.91	0.69	0.59	1.08	0.87	1.38	0.67
Glucosamine 6-phosphate	ME1072010	2.05	2.00	1.24	0.96	0.83	1.47	0.87	1.05	0.60	1.53	0.38	0.89	0.32	0.34	0.71
Glutamic acid	ME1071989	2.31	3.03	0.70	0.75	0.53	0.68	1.50	0.94	1.00	0.88	1.46	0.48	0.00	0.00	0.00
Glutathione	ME1071998	2.08	2.17	0.73	0.64	0.38	0.40	1.76	0.36	1.16	0.66	1.43	1.06	0.49	0.64	0.22
13C2-Fumaric acid	ME1071973	2.14	1.43	1.33	0.96	1.14	0.68	1.93	0.67	0.86	0.74	1.14	0.59	0.31	0.31	0.24
Succinic acid	ME1071968	2.25	1.60	1.30	0.95	1.07	0.64	1.97	0.67	0.83	0.76	1.13	0.54	0.27	0.28	0.24
Fumaric acid	ME1071972	2.31	2.02	1.33	0.87	1.11	0.92	1.60	0.61	0.85	0.62	0.69	0.66	0.52	0.47	0.17
Malic acid	ME1071976	2.08	2.03	1.19	1.10	0.95	0.88	1.65	0.59	1.04	0.80	0.62	0.72	0.43	0.41	0.16
13C2-Acetyl-CoA	ME1071942	1.40	0.70	1.66	0.71	1.26	0.78	1.51	1.35	0.72	2.12	0.39	0.59	0.50	0.56	0.64
13C2-Aspartic acid	ME1071995	0.23	0.06	1.51	1.17	1.43	1.32	1.64	1.51	1.39	0.72	0.15	1.25	0.75	0.53	0.44
13C3-Glutathione	ME1072000	0.83	1.12	1.02	1.31	0.85	1.21	1.44	0.31	1.20	1.13	1.03	1.10	0.81	0.75	0.33
13C2-Oxaloacetic acid	ME1071981	1.12	0.93	1.06	1.05	1.05	1.22	2.54	0.55	1.40	0.39	0.32	0.72	0.56	0.45	0.39
13C3-Oxaloacetic acid	ME1071982	0.48	1.07	1.00	0.76	0.98	0.68	2.36	0.99	2.25	0.85	0.61	0.66	0.41	0.45	0.41

Factors:

F1	Sample source:HEK293FT cells \| Time Point:0.25 hours \| Treatment:11mM U-13C-glucose
F2	Sample source:HEK293FT cells \| Time Point:0.25 hours \| Treatment:4mM U-13C-glutamine
F3	Sample source:HEK293FT cells \| Time Point:16 hours \| Treatment:11mM U-13C-glucose
F4	Sample source:HEK293FT cells \| Time Point:16 hours \| Treatment:4mM U-13C-glutamine
F5	Sample source:HEK293FT cells \| Time Point:24 hours \| Treatment:11mM U-13C-glucose
F6	Sample source:HEK293FT cells \| Time Point:24 hours \| Treatment:4mM U-13C-glutamine
F7	Sample source:HEK293FT cells \| Time Point:6 hours \| Treatment:11mM U-13C-glucose
F8	Sample source:HEK293FT cells \| Time Point:6 hours \| Treatment:11mM U-13C-glucose + 11mM 2-DG
F9	Sample source:HEK293FT cells \| Time Point:6 hours \| Treatment:11mM U-13C-glucose 1mM malonate
F10	Sample source:HEK293FT cells \| Time Point:6 hours \| Treatment:11mM U-13C-glucose + 2uM POMHEX
F11	Sample source:HEK293FT cells \| Time Point:6 hours \| Treatment:11mM U-13C-glucose + 300nM KL-11743
F12	Sample source:HEK293FT cells \| Time Point:6 hours \| Treatment:4mM U-13C-glutamine
F13	Sample source:HEK293FT cells \| Time Point:6 hours \| Treatment:4mM U-13C-glutamine + 1mM malonate
F14	Sample source:HEK293FT cells \| Time Point:6 hours \| Treatment:4mM U-13C-glutamine + 1uM CB-839
F15	Sample source:HEK293FT cells \| Time Point:6 hours \| Treatment:4mM U-13C-glutamine + 50uM V-9302

Data matrix