Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST004233)

(Analysis AN007048)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7
ornithine[13]C1[15]N1	ME1147068	0.32	4.20	0.18	0.33	0.01	1.23	0.35
ornithine	ME1147066	0.12	3.66	0.04	0.08	1.93	0.11	0.02
ornithine[15]N	ME1147067	0.25	3.45	NA	NA	0.81	0.56	NA
lysine	ME1147059	1.30	6.39	0.64	0.90	0.36	0.29	0.24
putrescine	ME1147081	1.95	4.89	1.63	2.20	0.06	0.34	0.04
cytosine	ME1147040	3.42	1.96	1.36	3.88	0.03	0.42	0.03
phosphocholine	ME1147071	3.59	2.14	1.24	3.07	0.02	0.46	0.02
methylthioadenosine	ME1147062	1.77	2.88	0.83	3.91	0.26	0.73	0.17
s-adenosylmethionine	ME1147083	2.17	2.55	1.12	2.93	0.12	0.89	0.07
spermidine	ME1147087	2.12	2.31	1.54	2.37	0.33	0.67	0.22
pipecolic acid	ME1147073	3.93	0.03	1.05	1.93	0.01	0.18	NA
NMMA	ME1147065	4.90	1.93	0.90	1.81	0.08	0.17	0.03
GABA	ME1147042	4.78	2.54	0.79	1.89	0.03	0.12	0.02
ADMA	ME1146989	4.44	2.37	1.01	2.18	0.05	0.19	0.02
SDMA	ME1147085	4.43	2.39	0.98	1.98	0.09	0.18	0.01
glutamine[13]C5	ME1147051	1.16	0.86	1.45	0.72	0.00	1.66	2.53
proline[15]N	ME1147078	1.12	0.70	1.09	0.67	0.01	2.00	2.32
kynurenic acid	ME1147057	2.15	NA	1.01	NA	0.90	0.83	0.57
glutamine	ME1147048	0.19	0.12	0.10	0.07	2.70	0.17	0.15
arginine	ME1146995	1.42	0.43	0.12	0.22	2.23	0.07	0.06
proline	ME1147077	0.63	0.86	0.28	0.48	2.17	0.27	0.11
tyrosine	ME1147098	0.90	0.55	0.47	0.69	1.70	0.65	0.42
carnitine	ME1147005	0.13	0.07	0.05	0.04	1.71	1.14	1.65
C20:4 carnitine	ME1147028	0.02	NA	NA	NA	1.14	0.96	1.09
C12 carnitine	ME1147018	0.06	0.08	NA	0.04	1.39	1.12	0.86
C18:2 carnitine	ME1147026	0.03	NA	0.02	NA	1.21	1.08	0.80
C16 carnitine	ME1147023	0.03	0.03	0.03	0.01	1.61	1.11	1.18
C2 carnitine	ME1147006	0.17	0.12	0.06	0.08	1.69	1.16	1.41
C18:1 carnitine	ME1147025	0.07	0.05	0.04	0.03	1.67	1.29	1.23
C18 carnitine	ME1147024	0.16	0.10	0.09	0.07	1.61	1.26	1.30
C4-OH carnitine	ME1147010	0.34	0.25	0.11	0.24	1.53	1.10	1.17
1-methylnicotinamide	ME1146978	0.26	0.18	0.16	0.16	1.60	1.22	1.11
trimethylamine-N-oxide	ME1147096	0.10	0.16	0.09	0.14	1.67	1.23	1.11
creatinine	ME1147039	0.08	0.10	0.06	0.06	1.57	1.39	1.08
C3 carnitine	ME1147007	0.11	0.07	0.04	0.03	1.64	1.35	0.86
creatine	ME1147038	0.20	0.09	0.09	0.04	1.60	1.32	0.96
C14:1 carnitine	ME1147021	0.12	0.11	0.09	0.13	1.67	1.14	0.91
C14 carnitine	ME1147020	0.07	0.06	0.03	0.03	1.82	1.03	0.88
beta-alanine	ME1147002	NA	NA	NA	0.41	1.10	1.09	0.36
glycine	ME1147052	0.73	0.34	0.34	0.46	1.39	1.17	0.67
C3-DC-CH3 carnitine	ME1147008	0.49	0.21	0.16	0.17	1.50	1.31	0.42
C26 carnitine	ME1147029	0.31	0.27	0.18	0.19	1.48	1.25	0.56
betaine	ME1147003	0.43	0.33	0.35	0.30	1.43	1.28	0.65
C20 carnitine	ME1147027	0.43	0.31	0.28	0.29	1.44	1.20	0.63
taurine	ME1147088	0.11	0.06	0.05	0.04	1.65	1.36	0.64
citrulline	ME1147033	0.18	0.13	0.08	NA	1.52	1.34	0.51
C4 carnitine	ME1147009	0.11	0.11	0.04	0.09	1.57	1.45	0.53
C5 carnitine	ME1147011	0.16	0.13	0.07	0.08	1.57	1.41	0.59
5-hydroxytryptophan	ME1146986	NA	NA	0.20	NA	1.03	1.63	0.43
C6 carnitine	ME1147013	0.04	0.06	0.02	NA	1.25	1.53	0.62
alanine	ME1146990	2.31	0.96	0.81	1.39	0.73	0.87	0.27
thiamine	ME1147089	2.04	1.42	1.05	1.88	0.67	0.73	0.61
alpha-glycerophosphocholine	ME1146992	1.36	0.88	0.57	1.17	0.99	1.12	0.12
choline	ME1147032	1.37	0.82	0.78	1.24	0.97	1.02	0.51
adenosine	ME1146988	1.78	1.28	0.86	1.49	0.85	0.81	0.45
aspartate	ME1147001	1.69	1.12	0.77	1.02	0.91	0.92	0.38
histidine	ME1147054	1.73	1.06	0.64	1.27	0.93	0.87	0.57
arginine[15]N	ME1146996	1.57	1.09	0.48	0.66	1.46	0.48	0.46
glutamate	ME1147044	1.31	1.16	0.90	0.89	1.24	0.68	0.39
glutamate[15]N	ME1147045	1.18	0.84	1.22	0.78	1.34	0.61	0.33
cotinine	ME1147037	0.63	1.36	0.84	NA	1.20	0.96	0.40
dimethylglycine	ME1147041	1.02	0.98	0.95	0.97	1.02	0.99	1.03
phenylalanine-d8	ME1146974	1.02	1.12	0.97	1.09	0.99	0.97	1.00
valine-d8	ME1146975	1.04	1.07	1.04	1.05	0.97	0.97	1.03
threonine	ME1147090	1.21	0.79	0.89	0.74	1.11	0.92	0.99
valine	ME1147099	1.18	0.78	0.89	0.85	1.12	0.92	0.85
tryptophan	ME1147097	0.87	0.63	0.57	0.68	1.37	0.96	0.63
phenylalanine	ME1147070	0.98	0.74	0.73	0.75	1.30	0.88	0.82
asparagine	ME1147000	0.98	0.64	0.63	0.72	1.23	1.02	0.82
leucine	ME1147058	0.95	0.65	0.77	0.63	1.24	0.98	0.91
glucose	ME1147043	0.82	0.53	0.87	0.42	1.23	0.97	1.52
niacinamide	ME1147064	0.86	0.57	0.76	0.64	1.37	0.85	1.25
anthranilic acid	ME1146994	0.86	0.68	0.97	0.82	1.22	0.90	1.14
serine	ME1147086	0.89	0.64	0.91	0.58	1.15	1.04	1.14
1-pyrroline-5-carboxylate	ME1146979	0.78	0.82	0.58	NA	1.07	1.07	0.90
methionine sulfoxide	ME1147061	0.65	0.42	0.53	0.36	1.51	0.94	1.17
methionine	ME1147060	0.55	0.30	0.56	0.29	1.50	1.06	0.94
isoleucine	ME1147056	0.68	0.45	0.66	0.42	1.39	1.02	1.00
trans-hydroxyproline	ME1147092	0.66	0.49	0.61	0.40	1.39	1.06	0.89
arginine[13]C1[15]N1	ME1146997	1.80	2.32	1.12	1.46	0.02	1.27	1.24
proline[13]C1[15]N1	ME1147079	1.63	0.18	1.10	2.69	0.00	0.89	0.62
homocysteine	ME1147055	1.35	NA	0.25	0.80	NA	0.91	NA
2-deoxycytidine	ME1146983	1.63	0.70	0.34	1.39	NA	0.64	NA
xanthosine	ME1147100	1.75	0.37	0.25	1.06	NA	0.68	NA
5-adenosylhomocysteine	ME1146984	1.32	1.25	0.41	1.38	0.02	1.30	NA
cAMP	ME1147030	0.94	0.98	0.75	1.20	NA	1.26	NA
1-methyladenosine	ME1146976	1.16	1.35	0.67	0.75	NA	0.39	NA
glutamate[13]C5	ME1147047	1.62	1.69	0.83	1.47	0.00	0.76	0.29
phosphoethanolamine	ME1147072	1.60	1.34	0.43	1.60	NA	0.36	NA

Factors:

F1	Sample source:infected RBC (iRBC) \| Parasite_type:Dd2 AD7 \| Parasite_line:Dd2∆ARG C1 \| Timepoint:10 h
F2	Sample source:infected RBC (iRBC) \| Parasite_type:Dd2 OD12 \| Parasite_line:Dd2∆OAT C1 \| Timepoint:10 h
F3	Sample source:infected RBC (iRBC) \| Parasite_type:Dd2 WT \| Parasite_line:Dd2 \| Timepoint:10 h
F4	Sample source:infected RBC (iRBC) \| Parasite_type:Dd2 WT \| Parasite_line:Dd2 \| Timepoint:10h
F5	Sample source:uninfected RBC (uRBC) \| Parasite_type:Control \| Parasite_line:Control RBCs \| Timepoint:0 h
F6	Sample source:uninfected RBC (uRBC) \| Parasite_type:Control \| Parasite_line:Control RBCs \| Timepoint:10 h
F7	Sample source:uninfected RBC (uRBC) \| Parasite_type:Control \| Parasite_line:Control RBCs \| Timepoint:10h

Data matrix