Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST004309)

(Analysis AN007172)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
valine	ME1176165	0.32	0.23	2.31	0.24	0.23	1.80
alpha-linolenate	ME1176007	0.20	0.13	2.41	0.07	0.14	2.11
gamma linolenate	ME1176060	0.20	0.13	2.41	0.07	0.14	2.11
isoleucine	ME1176085	0.17	0.12	2.56	0.12	0.12	1.87
leucine	ME1176087	0.17	0.12	2.56	0.12	0.12	1.87
propionylcarnitine	ME1176128	1.39	0.91	0.14	2.59	1.41	0.13
cysteinylglycine	ME1176038	0.77	0.77	0.00	3.12	1.99	0.00
pregnenolone	ME1176125	0.51	0.36	0.14	3.05	2.31	0.21
citrulline	ME1176029	1.03	0.19	0.99	2.11	0.42	1.26
guanidinoacetate	ME1176066	1.05	0.54	0.85	2.06	0.59	1.00
bilirubin	ME1176021	1.70	1.57	1.05	0.33	0.27	1.04
spermidine	ME1176139	0.66	0.63	1.53	0.79	1.40	0.63
linoleate	ME1176088	1.14	1.14	0.91	0.59	1.39	0.91
trans-linoleate	ME1176153	1.14	1.14	0.91	0.59	1.39	0.91
glucosamine-6-phosphate	ME1176062	1.34	0.83	1.21	0.60	0.82	1.05
trans-oleate	ME1176154	0.97	0.98	1.28	0.39	1.11	1.10
betaine	ME1176018	0.73	0.52	1.75	0.55	0.51	1.43
cis-4-hydroxy-proline	ME1176028	0.99	0.70	1.18	1.03	0.60	1.38
methylcytidine	ME1176094	0.89	0.82	0.72	1.23	0.82	1.69
udp	ME1176160	0.42	0.61	NA	0.42	2.55	NA
ethanolamine phosphate	ME1176055	0.76	0.74	NA	0.67	1.83	NA
palmitoylcarnitine	ME1176114	0.73	0.85	NA	0.63	1.79	NA
alpha-muricholate	ME1176009	0.90	1.32	0.10	1.76	2.45	0.07
beta-muricholate	ME1176020	0.90	1.32	0.10	1.76	2.45	0.07
galactose 1-phosphate	ME1176059	1.01	0.68	0.30	1.27	2.94	0.25
mannose 6-phosphate	ME1176090	1.01	0.68	0.30	1.27	2.94	0.25
1,5-anhydroglucitol	ME1175932	1.54	1.58	0.01	2.27	0.42	0.84
dulcitol	ME1176050	1.58	1.61	0.08	2.20	0.62	0.53
sorbitol	ME1176138	1.58	1.61	0.08	2.20	0.62	0.53
taurochenodeoxycholate	ME1176143	0.67	1.69	0.25	2.80	0.42	0.67
taurocholate	ME1176144	0.40	1.85	0.20	3.37	0.49	0.23
hypoxanthine	ME1176076	2.66	0.98	0.10	1.50	1.31	0.05
2^-deoxyguanosine 5^-monophosphate (dgmp)	ME1175955	2.29	0.78	0.30	1.96	0.98	0.16
adenosine 5^-monophosphate	ME1176000	2.29	0.78	0.30	1.96	0.98	0.16
homogentisate	ME1176071	2.68	0.78	0.36	1.50	0.78	0.32
3,4-dihydroxymandelaldehyde	ME1175963	2.68	0.78	0.36	1.50	0.78	0.32
3,4-dihydroxyphenylacetate	ME1175964	2.68	0.78	0.36	1.50	0.78	0.32
formylkynurenine	ME1176058	0.99	2.06	0.80	0.67	1.18	0.44
4-acetamidobutanoate	ME1175978	1.32	1.87	0.13	0.88	1.42	0.96
alpha-aminoadipic semialdehyde	ME1176006	1.31	1.86	0.15	0.88	1.41	0.96
carnitine	ME1176024	1.45	1.43	0.09	1.88	1.69	0.07
pregnanetriol	ME1176124	1.59	1.24	0.07	1.79	1.83	0.10
dihydrothymine	ME1176044	1.44	0.90	0.11	2.05	1.95	0.14
hypotaurine	ME1176075	1.51	1.05	0.09	2.27	1.64	0.06
erythro-4-hydroxy-glutamate	ME1176053	2.03	0.99	0.19	1.83	1.25	0.23
indole-3-acrylate	ME1176080	1.74	0.95	0.31	2.00	1.21	0.24
pantothenate	ME1176117	1.97	0.96	0.16	2.14	1.20	0.13
tyrosine	ME1176159	1.92	1.34	0.18	1.97	1.00	0.13
cortisone	ME1176032	1.69	1.27	0.18	1.90	1.28	0.23
methionine	ME1176091	1.68	1.22	0.20	1.93	1.37	0.14
1-methylhistidine	ME1175947	1.36	1.45	0.26	1.58	1.58	0.27
glutamate	ME1176063	1.46	1.37	0.28	1.51	1.49	0.37
asparagine	ME1176014	1.50	1.62	0.20	1.80	1.24	0.18
glucosamine	ME1176061	1.52	1.52	0.22	1.69	1.29	0.27
histidine	ME1176069	1.53	1.50	0.23	1.68	1.39	0.18
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline	ME1175962	1.14	1.49	0.55	1.65	1.17	0.29
arginine	ME1176013	1.39	1.21	0.40	1.89	1.21	0.31
threonine	ME1176149	1.34	1.32	0.42	1.74	1.25	0.31
indole-3-acetate	ME1176079	2.32	1.20	0.32	1.43	0.89	0.30
creatine	ME1176034	2.23	1.36	0.41	0.97	1.23	0.19
cystathionine	ME1176036	2.15	1.36	0.21	1.27	1.22	0.31
2-aminobutyrate	ME1175953	2.24	1.72	0.02	1.20	1.47	0.01
dimethylglycine	ME1176046	2.24	1.72	0.02	1.20	1.47	0.01
ursodeoxycholate	ME1176164	2.20	1.63	0.07	1.39	1.26	0.07
chenodeoxycholate	ME1176025	2.20	1.63	0.07	1.39	1.26	0.07
hyodeoxycholate	ME1176074	2.20	1.63	0.07	1.39	1.26	0.07
cinnamate	ME1176027	1.43	1.72	0.21	1.38	1.60	0.19
phenylalanine	ME1176119	1.45	1.78	0.16	1.40	1.63	0.14
isocitrate	ME1176084	1.97	1.39	0.00	1.73	1.57	0.00
nicotinamide	ME1176106	1.79	1.73	0.11	1.69	1.19	0.09
serine	ME1176136	1.80	1.72	0.08	1.71	1.24	0.07
2-aminoacrylate	ME1175952	1.95	1.44	0.14	1.68	1.25	0.12
5^-s-methyl-5^-thioadenosine	ME1175992	1.75	1.46	0.18	1.75	1.28	0.12
7-methylguanine	ME1175997	1.85	1.86	0.07	1.28	1.51	0.04
dimethylguanosine	ME1176047	1.92	1.53	0.20	1.29	1.44	0.14
cortisol	ME1176031	1.85	1.50	0.16	1.46	1.44	0.15
creatinine	ME1176035	1.77	1.59	0.13	1.49	1.46	0.13
cystine	ME1176039	1.70	1.81	0.05	1.52	1.52	0.05
corticosterone	ME1176030	1.78	1.66	0.04	1.52	1.60	0.03
11-deoxycortisol	ME1175936	1.78	1.66	0.04	1.52	1.60	0.03
21-deoxycortisol	ME1175950	1.78	1.66	0.04	1.52	1.60	0.03
pipecolate	ME1176122	1.83	1.59	0.09	1.66	1.38	0.06
vanillate	ME1176166	1.79	1.51	0.06	1.65	1.57	0.05
4,6-dihydroxyquinoline	ME1175976	1.92	0.69	0.70	0.98	1.39	0.51
4,8-dihydroxyquinoline	ME1175977	1.92	0.69	0.70	0.98	1.39	0.51
dihydrocortisol	ME1176043	1.58	1.62	0.45	0.90	1.39	0.43
11beta,17alpha,21-trihydroxypregnenolone	ME1175933	1.58	1.62	0.45	0.90	1.39	0.43
3alpha,11beta,21-trihydroxy-20-oxo-5beta-pregnan-18-al	ME1175967	1.58	1.62	0.45	0.90	1.39	0.43
uracil	ME1176161	1.61	1.52	0.49	1.24	1.04	0.44
porphobilinogen	ME1176123	1.51	1.43	0.51	1.14	1.33	0.41
taurine	ME1176142	1.55	1.26	0.45	1.34	1.39	0.37
pyroglutamate	ME1176131	1.38	1.22	0.58	1.47	0.98	0.65
glutamine	ME1176064	1.49	1.32	0.43	1.60	1.06	0.48
mevalonate	ME1176098	1.47	1.30	0.49	1.60	0.94	0.53
methylimidazoleacetate	ME1176096	1.57	1.14	0.71	1.14	0.99	0.65
3-o-methyl-dopa (3-omd)	ME1175972	1.39	1.17	0.62	1.37	1.25	0.44
alanine	ME1176004	1.38	1.17	0.61	1.31	1.19	0.60
beta-alanine	ME1176015	1.38	1.17	0.61	1.31	1.19	0.60
homoarginine	ME1176070	1.43	1.04	0.94	1.29	0.83	0.51
glycine	ME1176065	1.13	1.14	0.78	1.34	0.93	0.83
lysine	ME1176089	1.08	1.04	1.10	1.12	0.85	0.74
biliverdin	ME1176022	1.97	0.96	NA	0.25	0.82	NA
4-guanidinobutanoate	ME1175981	1.02	0.46	NA	1.66	0.87	NA
3^,5^-cyclic amp	ME1175965	0.99	0.80	NA	1.04	1.17	NA
sphingosine-1-phosphate	ME1176141	1.15	0.68	NA	0.92	1.24	NA
urocanate	ME1176163	1.33	0.71	NA	1.12	0.84	NA
dimethylarginine	ME1176045	1.25	1.04	NA	0.87	0.84	NA
17-hydroxyprogesterone	ME1175940	1.37	0.88	NA	0.92	0.83	NA
methylinosine	ME1176097	1.27	0.89	NA	0.89	0.95	NA
testosterone	ME1176145	1.23	0.90	NA	0.90	0.97	NA
4-methylthio-2-oxobutanoate	ME1175985	1.05	1.25	NA	0.95	0.75	NA
palmitoyl glucuronide	ME1176113	1.11	1.11	NA	1.01	0.77	NA
trimethyl lysine	ME1176156	1.13	1.10	NA	0.98	0.79	NA
methyladenosine	ME1176093	1.10	1.05	NA	0.86	0.98	NA
aminoacetone	ME1176010	1.00	0.99	NA	1.01	0.99	NA
sarcosine	ME1176135	1.04	0.97	NA	1.11	0.88	NA
11-dehydrocorticosterone	ME1175935	0.87	1.24	NA	0.77	1.13	NA
quinolinate	ME1176132	0.79	1.41	NA	0.38	1.41	NA
palmitoyl-threonine	ME1176116	0.65	4.48	0.01	0.97	0.54	0.01
deoxyinosine	ME1176041	0.61	2.24	NA	0.59	0.57	NA
kynurenine	ME1176086	0.96	2.37	0.11	0.75	2.32	0.07
palmitoyl-serine	ME1176115	0.64	3.55	0.02	0.40	2.01	0.02

Factors:

F1	Sample source:Plasma \| Experimental_condition:Ad-Libitum
F2	Sample source:Plasma \| Experimental_condition:Ad-Libitum + SIV
F3	Sample source:Plasma \| Experimental_condition:Ad-libitum+SIV+ART
F4	Sample source:Plasma \| Experimental_condition:CR
F5	Sample source:Plasma \| Experimental_condition:CR + SIV
F6	Sample source:Plasma \| Experimental_condition:CR+SIV+ART

Data matrix