Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST004309)

Reversed phase NEGATIVE ION MODE (Analysis AN007173)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
3-methoxy-4-hydroxyphenylethyleneglycol	ME1176205	0.05	0.03	0.46	0.03	0.04	5.75
cholate	ME1176255	0.17	0.24	0.09	0.33	0.45	5.32
ascorbate	ME1176248	1.64	1.08	0.10	3.18	0.53	0.07
hippurate	ME1176300	2.11	0.38	0.19	1.32	2.34	0.20
palmitate	ME1176330	2.15	1.00	0.25	0.83	2.00	0.28
udp-galactose	ME1176374	0.39	0.69	NA	0.29	2.63	NA
adp	ME1176240	1.14	0.16	NA	0.54	2.16	NA
udp-glcnac	ME1176375	1.00	0.51	NA	0.51	1.98	NA
xanthine	ME1176379	0.86	1.62	0.11	0.93	2.93	0.15
stearate	ME1176353	0.79	0.42	0.22	1.97	2.91	0.22
glucose 6-phosphate	ME1176290	1.01	0.68	0.36	1.27	2.94	0.17
glucose 1-phosphate	ME1176289	1.01	0.68	0.36	1.27	2.94	0.17
fructose 1-phosphate	ME1176280	1.01	0.68	0.36	1.27	2.94	0.17
fructose 6-phosphate	ME1176281	1.01	0.68	0.36	1.27	2.94	0.17
3-hydroxybutyrate	ME1176199	2.59	1.94	0.09	0.54	1.38	0.07
dehydroepiandrosterone sulfate (dheas)	ME1176263	2.77	1.60	0.02	0.99	1.26	0.00
adipate	ME1176239	1.75	2.43	0.15	0.89	1.21	0.14
2-aminoadipate	ME1176176	1.23	2.33	0.40	0.73	1.57	0.15
2-amino-3-oxobutanoate	ME1176175	1.12	2.95	0.18	0.45	1.73	0.13
formylanthranilate	ME1176278	1.51	2.70	0.17	0.56	1.51	0.10
deoxycholate	ME1176264	1.65	1.22	0.21	1.04	0.95	1.46
4-(2-aminophenyl)-2,4-dioxobutanoate	ME1176213	1.47	0.74	0.99	1.55	0.79	0.45
allantoin	ME1176242	1.73	1.10	0.89	0.83	0.85	0.68
palmitoyl phenylalanine	ME1176333	0.91	1.48	0.59	0.81	1.95	0.52
dihydrouracil	ME1176267	0.83	1.22	0.74	1.49	1.33	0.56
ribose	ME1176348	0.79	1.26	0.61	1.26	1.54	0.80
xylose	ME1176381	0.79	1.26	0.61	1.26	1.54	0.80
dihydroxyacetone phosphate	ME1176268	0.74	0.79	0.82	0.58	2.55	0.63
palmitoylglycine	ME1176336	0.91	0.85	1.03	0.77	1.50	0.91
heptadecanoate	ME1176299	1.16	0.54	0.61	1.05	2.31	0.58
xylulose 5-phosphate	ME1176382	1.33	0.85	0.87	0.69	1.88	0.47
ribulose 5-phosphate	ME1176351	1.33	0.85	0.87	0.69	1.88	0.47
ribose 1-phosphate	ME1176349	1.33	0.85	0.87	0.69	1.88	0.47
ribose 5-phosphate	ME1176350	1.33	0.85	0.87	0.69	1.88	0.47
valerate	ME1176378	1.15	1.62	NA	0.52	0.71	NA
formyl-acetyl-5-methoxykynurenamine	ME1176277	1.66	0.76	NA	0.93	0.65	NA
3,4-dihydroxyphenylalanine (dopa)	ME1176191	1.31	0.72	NA	1.30	0.66	NA
5-hydroxy tryptophan	ME1176229	1.41	0.63	NA	1.52	0.44	NA
acetyl-glucosamine 1-phosphate	ME1176235	0.93	0.64	NA	0.94	1.50	NA
pyruvaldehyde	ME1176345	0.55	1.03	NA	1.10	1.32	NA
arachidonate	ME1176247	0.81	1.11	NA	0.71	1.37	NA
docosatetraenoate	ME1176272	1.14	1.15	NA	0.36	1.35	NA
eicosatrienoate	ME1176275	1.00	1.09	NA	0.49	1.42	NA
testosterone-glucuronide	ME1176365	1.02	1.12	NA	0.60	1.26	NA
formyl-aspartate	ME1176279	1.23	0.83	NA	0.95	1.00	NA
NAA	ME1176317	1.17	0.86	NA	0.99	0.98	NA
2-hydroxyglutarate	ME1176179	1.23	1.02	NA	0.89	0.86	NA
methylguanosine	ME1176315	1.24	0.97	NA	0.93	0.86	NA
5a-pregnanediol	ME1176228	1.43	0.79	NA	0.94	0.84	NA
3-hydroxyisovalerate	ME1176200	1.33	0.89	NA	0.89	0.89	NA
acetylglutamate	ME1176236	1.30	0.85	NA	1.00	0.85	NA
3-aminoisobutyrate (GABA)	ME1176193	1.35	1.04	NA	0.72	0.89	NA
butanoate	ME1176252	1.45	1.16	NA	0.57	0.81	NA
eicosapentaenoate	ME1176274	1.51	0.82	NA	0.63	1.03	NA
palmitoleate	ME1176331	1.29	0.89	NA	0.70	1.13	NA
2-aminomuconate	ME1176177	0.96	1.32	NA	0.83	0.89	NA
palmitoyl alanine	ME1176332	1.04	0.84	NA	0.76	1.36	NA
palmitoyl leucine	ME1176337	1.10	0.88	NA	0.79	1.23	NA
palmitoyl proline	ME1176334	1.07	0.98	NA	0.74	1.21	NA
4-hydroxy-enol-phenylpyruvate	ME1176220	0.93	1.01	NA	0.96	1.10	NA
4-hydroxyphenylpyruvate	ME1176222	0.93	1.01	NA	0.96	1.10	NA
dihydroxycholesterol	ME1176269	0.95	1.03	NA	0.96	1.07	NA
xanthosine	ME1176380	0.94	1.03	NA	0.97	1.07	NA
3-mercaptolactate	ME1176203	0.98	1.02	NA	1.00	1.00	NA
4-hydroxyphenylacetaldehyde	ME1176221	0.97	1.00	NA	0.99	1.05	NA
phenylacetate	ME1176338	0.97	1.00	NA	0.99	1.05	NA
gentisate-aldehyde	ME1176285	1.08	0.99	NA	0.98	0.95	NA
thiocysteine	ME1176368	1.08	1.10	NA	0.87	0.95	NA
3-phosphohydroxypyruvate	ME1176210	0.95	0.89	NA	0.94	1.22	NA
isopentenyl pyrophosphate	ME1176306	0.82	0.83	NA	1.02	1.32	NA
phenol	ME1176339	0.77	0.88	NA	1.07	1.28	NA
pyruvate	ME1176346	1.01	1.28	0.08	2.40	1.69	0.15
taurolithocholate	ME1176360	1.31	1.04	0.50	2.14	0.70	0.66
lactate	ME1176308	1.28	1.05	0.27	1.88	1.69	0.32
alpha ketoglutaramate	ME1176243	1.17	1.12	0.40	1.77	1.32	0.61
7alpha-hydroxyandrostenedione	ME1176232	1.38	1.09	0.45	1.72	1.24	0.49
4-androsten-16alpha-ol-3,17-dione	ME1176214	1.38	1.09	0.45	1.72	1.24	0.49
19-hydroxyandrostenedione	ME1176171	1.38	1.09	0.45	1.72	1.24	0.49
2-methoxyestradiol-17beta	ME1176183	1.38	1.09	0.45	1.72	1.24	0.49
cis-aconitate	ME1176258	1.94	1.24	0.26	1.40	1.23	0.43
3^,5^-cyclic gmp	ME1176192	1.61	1.15	0.40	1.54	1.33	0.37
5-methoxyindoleacetate	ME1176231	1.74	1.26	0.34	1.61	1.06	0.43
deoxyribose	ME1176266	1.62	1.22	0.45	1.44	1.04	0.60
docosahexaenoate	ME1176270	1.85	1.65	0.04	1.09	1.99	0.02
urate	ME1176376	1.53	1.66	0.54	0.67	1.44	0.46
docosapentaenoate (dpa)	ME1176271	1.52	1.60	0.39	0.83	1.78	0.29
succinylacetone	ME1176358	1.73	1.83	0.21	0.95	1.63	0.19
phenylacetaldehyde	ME1176340	1.70	1.74	0.00	1.60	1.62	0.00
indole-5,6-quinone	ME1176304	1.54	1.58	0.20	1.50	1.51	0.20
propanoate	ME1176343	1.81	1.48	0.15	1.58	1.41	0.14
suberate	ME1176354	1.75	1.63	0.14	1.44	1.51	0.11
aldosterone	ME1176241	1.83	1.37	0.01	2.06	1.38	0.01
aspartate	ME1176249	2.10	1.29	0.08	1.72	1.34	0.08
citrate	ME1176259	1.94	1.37	0.03	1.71	1.55	0.05
phenylpyruvate	ME1176342	1.84	1.40	0.00	1.77	1.66	0.00
3-methyl-2-oxobutanoate	ME1176206	1.47	1.30	0.11	1.71	1.91	0.09
3-methyl-2-oxopentanoate	ME1176207	1.57	1.47	0.06	1.68	1.82	0.04
4-methyl-2-oxopentanoate	ME1176224	1.57	1.47	0.06	1.68	1.82	0.04
2-oxoglutarate	ME1176189	1.08	1.79	0.05	1.63	2.01	0.08
malate	ME1176312	1.46	1.70	0.01	1.57	1.90	0.02
acetoacetate	ME1176234	1.33	1.78	0.06	1.54	1.86	0.06
succinic semialdehyde	ME1176356	1.33	1.78	0.06	1.54	1.86	0.06
glucose	ME1176288	0.95	1.51	0.35	1.48	1.75	0.39
oxalosuccinate	ME1176329	1.17	1.49	0.25	1.79	1.61	0.19
fumarate	ME1176282	1.26	1.37	0.31	1.30	1.57	0.66
cysteine	ME1176260	1.43	1.63	0.37	1.25	1.38	0.37
androsterone glucuronide	ME1176245	1.42	1.53	0.33	1.25	1.71	0.22
methylmalonate	ME1176316	1.26	1.62	0.21	1.46	1.70	0.27
succinate	ME1176355	1.26	1.62	0.21	1.46	1.70	0.27
3-indoxyl sulphate	ME1176202	2.25	1.16	0.24	1.86	0.78	0.21
phenyllactate	ME1176341	2.24	0.89	0.23	1.98	0.95	0.23
ornithine	ME1176328	1.69	2.00	0.02	1.86	1.06	0.02
glycerol 3-phosphate	ME1176294	2.25	1.34	0.38	1.27	0.90	0.28
2-hydroxyphenylacetate	ME1176181	1.89	1.72	0.20	1.53	1.04	0.16
kynurenate	ME1176307	1.91	1.85	0.30	1.16	0.99	0.27
gentisate	ME1176284	0.62	0.28	0.62	3.13	0.74	0.86
dopaquinone	ME1176273	0.85	0.60	0.75	2.01	1.22	0.74
leucodopachrome	ME1176309	0.85	0.60	0.75	2.01	1.22	0.74
1-pyrroline-5-carboxylate	ME1176169	0.68	0.43	NA	2.20	0.68	NA
palmitoyl-cysteine	ME1176335	0.76	0.67	NA	1.51	1.06	NA
5-hydroxyindole-3-acetate	ME1176230	0.14	0.49	2.38	0.12	0.47	1.48
caproate	ME1176253	0.16	0.13	2.00	0.18	0.23	2.65
cdp-ethanolamine	ME1176254	0.21	0.22	2.24	0.21	0.21	2.10
tryptophan	ME1176373	0.07	0.03	2.64	0.08	0.04	2.04
n-formiminoglutamate	ME1176322	0.40	0.26	2.36	0.99	0.27	0.81
gluconate	ME1176286	0.83	0.54	1.37	0.48	0.43	2.09
octanoate	ME1176325	0.64	0.44	1.73	0.45	0.49	1.76
oleate	ME1176326	0.97	0.98	1.28	0.39	1.11	1.10
uridine	ME1176377	1.11	0.85	1.45	0.64	0.57	1.08
choline-phosphate	ME1176256	1.16	0.77	1.12	0.78	0.87	1.20
tocopherol (vitamin e)	ME1176371	0.82	0.74	1.36	0.90	0.82	1.13
glycoursodeoxycholate	ME1176298	0.59	1.27	0.53	0.68	0.23	3.03
glycochenodeoxycholate	ME1176295	0.59	1.27	0.53	0.68	0.23	3.03
glycodeoxycholate	ME1176297	0.59	1.27	0.53	0.68	0.23	3.03
glycocholate	ME1176296	0.23	2.01	0.17	1.41	0.51	2.21
tauromuricholate	ME1176361	0.33	1.53	0.15	2.78	0.40	1.36
taurodeoxycholate	ME1176359	0.52	1.31	0.35	2.16	0.33	1.77
tauroursodeoxycholate	ME1176362	0.52	1.31	0.35	2.16	0.33	1.77

Factors:

F1	Sample source:Plasma \| Experimental_condition:Ad-Libitum
F2	Sample source:Plasma \| Experimental_condition:Ad-Libitum + SIV
F3	Sample source:Plasma \| Experimental_condition:Ad-libitum+SIV+ART
F4	Sample source:Plasma \| Experimental_condition:CR
F5	Sample source:Plasma \| Experimental_condition:CR + SIV
F6	Sample source:Plasma \| Experimental_condition:CR+SIV+ART

Data matrix