Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for 13C targeted metabolomics (Study ST000147)

Negative ion mode (Analysis AN000233)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8
Aspartate	ME685551	0.38	1.56	0.90	1.58	0.18	1.69	0.35	1.84
Sucrose	ME685524	0.12	0.35	3.78	0.11	0.02	NA	0.28	0.09
Fructose 1,6-bisphosphate_13C_2	ME685575	4.53	0.02	2.34	0.02	0.06	0.01	0.03	NA
Glutamate_13C_2	ME685597	3.97	0.04	2.49	0.03	0.74	0.02	0.68	0.02
Malonyl-CoA_13C_3	ME685612	1.23	NA	1.38	NA	0.01	NA	0.16	NA
Malonyl-CoA_13C_1	ME685610	1.54	NA	1.68	NA	0.04	NA	0.13	NA
2 or 3-phosphoglycerate_13C_2	ME685527	1.31	0.01	1.68	0.02	0.00	NA	NA	NA
Aspartate_13C_1	ME685552	1.35	0.06	1.83	0.18	NA	NA	NA	NA
6-Phosphogluconate	ME685529	1.11	NA	1.97	NA	0.36	NA	0.56	NA
3-phosphoglyceraldehyde_13C_1	ME685581	1.64	NA	1.35	NA	0.31	NA	0.71	NA
6-Phosphogluconate_13C_1	ME685530	1.25	NA	1.40	NA	0.61	NA	0.73	NA
6-Phosphogluconate_13C_2	ME685531	1.18	NA	1.40	NA	0.56	NA	0.86	NA
Fructose 1,6-bisphosphate_13C_3	ME685576	1.84	0.02	0.40	0.05	NA	NA	NA	NA
Adenosine monophosphate_13C_3	ME685548	1.54	0.05	1.04	NA	NA	NA	0.19	NA
Glucose 6-phosphate or fructose-6-phosphate_13C_4	ME685588	1.64	NA	1.01	NA	0.03	NA	0.03	NA
Adenosine monophosphate_13C_4	ME685549	1.60	0.04	1.38	NA	0.02	NA	NA	NA
Adenosine diphosphate_13C_2	ME685541	1.98	NA	1.32	NA	0.03	NA	0.01	NA
Adenosine triphosphate_13C_2	ME685558	1.97	NA	1.66	NA	0.02	NA	0.03	NA
Adenosine triphosphate_13C_3	ME685559	1.81	NA	1.51	0.01	0.00	NA	0.00	NA
Nicotinamide Adenine Dinucleotide oxidized_13C_2	ME685614	2.50	NA	1.45	NA	0.02	NA	0.04	NA
Adenosine monophosphate_13C_1	ME685546	2.39	0.09	1.63	NA	0.19	NA	0.09	NA
Nicotinamide Adenine Dinucleotide oxidized_13C_1	ME685613	2.14	NA	1.59	NA	0.14	NA	0.12	NA
Nicotinamide Adenine Dinucleotide oxidized_13C_3	ME685615	2.20	NA	1.45	NA	0.00	NA	0.01	NA
Adenosine diphosphate_13C_1	ME685540	2.30	NA	1.45	NA	0.09	NA	0.16	NA
Adenosine monophosphate_13C_2	ME685547	2.30	0.02	1.60	NA	0.03	NA	0.10	NA
Acetyl-CoA_13C_1	ME685537	1.89	NA	1.83	NA	0.11	NA	0.17	NA
Glucose 6-phosphate or fructose-6-phosphate_13C_1	ME685585	2.06	0.03	1.77	NA	0.23	NA	0.26	NA
Adenosine triphosphate_13C_1	ME685557	2.34	0.00	1.86	NA	0.05	NA	0.08	NA
Glucose 6-phosphate or fructose-6-phosphate_13C_2	ME685586	2.20	0.05	2.04	NA	0.06	NA	0.03	NA
Ribose-5-phosphate or xylulose 5-phosphate_13C_1	ME685627	3.06	0.02	1.20	NA	0.02	NA	0.05	NA
3-Glycerophosphate_13C_1	ME685592	2.71	NA	1.34	NA	0.09	NA	0.20	0.00
Fructose 1,6-bisphosphate_13C_4	ME685577	2.87	NA	1.10	NA	0.03	NA	0.00	NA
3-Glycerophosphate_13C_2	ME685593	2.80	NA	1.19	NA	0.00	NA	0.00	NA
Nicotinamide Adenine Dinucleotide reduced_13C_2	ME685619	2.70	NA	1.24	NA	0.02	NA	0.04	NA
Nicotinamide Adenine Dinucleotide reduced_13C_3	ME685620	2.71	NA	1.25	NA	0.01	NA	0.03	NA
Fructose 1,6-bisphosphate_13C_1	ME685574	2.48	NA	0.96	NA	0.16	NA	0.11	NA
Nicotinamide Adenine Dinucleotide reduced_13C_4	ME685621	2.01	NA	0.98	NA	0.00	NA	0.00	NA
Nicotinamide Adenine Dinucleotide reduced_13C_1	ME685618	2.13	NA	1.14	NA	0.04	NA	0.06	NA
Nicotinamide Adenine Dinucleotide reduced_13C_5	ME685622	2.29	NA	1.04	NA	0.00	NA	0.00	NA
Malate	ME685520	2.59	0.01	3.45	0.02	0.86	0.01	1.04	0.01
Citrate or Isocitrate	ME685562	1.75	0.69	2.29	0.77	0.73	0.55	0.80	0.43
Citrate or Isocitrate_13C_2	ME685564	2.67	0.69	2.12	0.46	0.63	0.33	0.81	0.28
Glutamate	ME685595	2.75	0.33	2.81	0.27	0.74	0.29	0.62	0.21
Aspartate_13C_2	ME685553	1.34	0.05	2.48	0.09	0.97	0.09	2.25	0.15
3-Glycerophosphate	ME685591	1.87	0.00	0.61	0.00	1.74	NA	1.11	0.00
Malate_13C_1	ME685605	2.02	0.00	1.30	0.00	1.12	0.00	1.22	NA
Citrate or Isocitrate_13C_1	ME685563	2.07	0.33	1.38	0.20	1.58	0.55	1.56	0.34
Glutamate_13C_1	ME685596	2.79	0.04	1.37	0.03	1.97	0.05	1.38	0.05
Glutamate_13C_4	ME685599	3.10	0.04	1.55	0.03	0.76	NA	1.14	0.05
Malate_13C_2	ME685606	2.50	0.00	2.25	0.00	1.17	0.00	1.74	0.00
Citrate or Isocitrate_13C_5	ME685567	0.19	0.07	0.08	0.02	1.53	0.93	3.62	1.56
Citrate or Isocitrate_13C_6	ME685568	0.55	0.27	0.34	0.31	1.19	0.57	3.55	1.22
Aspartate_13C_4	ME685555	0.15	NA	0.20	NA	1.06	0.02	4.14	0.15
Glutamate_13C_5	ME685600	0.13	0.00	0.04	0.00	2.69	0.15	4.37	0.28
Malate_13C_4	ME685608	0.31	0.02	0.21	0.01	2.12	0.02	4.61	0.03
Sucrose_13C_1	ME685640	0.10	0.02	NA	NA	0.21	NA	2.15	1.79
Fructose 1,6-bisphosphate	ME685519	1.08	0.16	0.41	0.03	3.19	0.02	2.12	NA
Ribose-5-phosphate or xylulose 5-phosphate	ME685626	NA	0.06	NA	0.18	3.13	0.06	1.77	0.29
6-Phosphogluconate_13C_6	ME685535	0.14	NA	NA	NA	0.72	NA	2.42	0.18
Adenosine monophosphate	ME685545	0.54	0.34	0.61	NA	1.79	NA	1.59	0.07
Nicotinamide Adenine Dinucleotide oxidized	ME685521	0.40	NA	0.22	NA	1.76	NA	1.62	NA
Nicotinamide Adenine Dinucleotide reduced	ME685522	0.49	NA	0.20	NA	2.00	NA	1.30	NA
Acetyl-CoA	ME685536	0.41	NA	0.76	NA	1.21	NA	1.63	NA
Malonyl-CoA	ME685609	0.56	NA	0.91	NA	1.07	NA	1.47	NA
6-Phosphogluconate_13C_4	ME685533	0.55	NA	0.47	NA	1.00	NA	1.98	NA
6-Phosphogluconate_13C_5	ME685534	0.63	NA	0.17	NA	0.98	NA	1.67	NA
6-Phosphogluconate_13C_3	ME685532	0.92	NA	0.66	NA	0.75	NA	1.66	NA
Acetyl-CoA_13C_2	ME685538	0.85	NA	0.95	NA	0.66	NA	1.54	NA
Malonyl-CoA_13C_2	ME685611	0.93	NA	1.27	NA	0.52	NA	1.27	NA
Phosphoenolpyruvate	ME685523	1.14	NA	1.05	NA	0.40	NA	1.41	NA
Sedoheptulose 7-phosphate	ME685632	0.95	NA	0.39	NA	1.45	NA	1.21	NA
3-phosphoglyceraldehyde	ME685580	0.90	NA	0.78	NA	1.07	NA	1.24	NA
Erythrose 4-phosphate	ME685569	1.13	NA	0.81	NA	0.95	NA	1.11	NA
Citrate or Isocitrate_13C_3	ME685565	1.34	0.22	0.66	0.09	1.64	0.73	2.51	0.82
Citrate or Isocitrate_13C_4	ME685566	1.52	0.40	0.89	0.19	0.94	1.03	1.80	1.24
Glutamate_13C_3	ME685598	1.71	0.02	0.67	0.01	2.54	0.08	2.88	0.09
Malate_13C_3	ME685607	1.81	0.01	0.97	0.01	1.81	0.02	3.34	0.02
2 or 3-phosphoglycerate_2PG/3PG	ME685525	1.14	0.01	1.56	0.05	1.12	0.06	2.39	0.14
Aspartate_13C_3	ME685554	0.90	NA	0.87	NA	0.93	0.07	2.79	0.16
Adenosine triphosphate	ME685556	0.87	0.04	1.29	0.03	1.72	0.00	3.06	0.00
Adenosine diphosphate	ME685539	0.57	0.02	0.70	0.03	2.00	NA	2.35	NA
Glucose 6-phosphate or fructose-6-phosphate	ME685584	0.83	0.13	0.48	0.07	2.08	0.02	3.13	0.05

Factors:

F1	Treatment:13C glucose labeled \| Cell type:Cloned Jurkat cell mid level Noxa \| Harvest:cells
F2	Treatment:13C glucose labeled \| Cell type:Cloned Jurkat cell mid level Noxa \| Harvest:spent medium
F3	Treatment:13C glucose labeled \| Cell type:Noxa overexpressed Jurkat cell \| Harvest:cells
F4	Treatment:13C glucose labeled \| Cell type:Noxa overexpressed Jurkat cell \| Harvest:spent medium
F5	Treatment:13C glutamine labeled \| Cell type:Cloned Jurkat cell mid level Noxa \| Harvest:cells
F6	Treatment:13C glutamine labeled \| Cell type:Cloned Jurkat cell mid level Noxa \| Harvest:spent medium
F7	Treatment:13C glutamine labeled \| Cell type:Noxa overexpressed Jurkat cell \| Harvest:cells
F8	Treatment:13C glutamine labeled \| Cell type:Noxa overexpressed Jurkat cell \| Harvest:spent medium

Data matrix