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Clustering data with hclust algorithm for Metabolomic profiles in P. gingivalis cells treated with pABA (Study ST000384)
CE-TOF MS (Analysis AN000619)
Metabolite
Structure
F1
F2
Vanillic acid
ME133191
NA
1.00
Tyramine
ME133197
NA
1.00
Pimelic acid
ME133189
NA
1.00
p-Aminobenzoic acid
ME133196
NA
1.00
N-6-trimethyllysine
ME133200
NA
1.00
N6-acetyllysine
ME133199
NA
1.00
Maleic acid
ME133187
NA
1.00
Fructose 1,6-diphosphate
ME133194
NA
1.00
Deoxyguanosine
ME133202
NA
1.00
Deoxyadenosine/5^-Deoxyadenosine
ME133201
NA
1.00
CoA_divalent
ME133195
NA
1.00
Biotin
ME133193
NA
1.00
5-Oxo-2-tetrahydrofurancarboxylic acid
ME133188
NA
1.00
3-Hydroxymethylglutaric acid
ME133190
NA
1.00
3-Acetylacrylic acid
ME133186
NA
1.00
2-Isopropylmalic acid
ME133192
NA
1.00
2-(Methylamino)benzoic acid
ME133198
NA
1.00
dCMP
ME133203
0.11
1.89
dAMP
ME133204
0.19
1.81
GDP-mannose/GDP-galactose
ME133205
0.20
1.80
Glucose 6-phosphate
ME133208
0.38
1.62
3-Phosphoglyceric acid
ME133209
0.39
1.61
dTMP
ME133210
0.40
1.60
Citramalic acid
ME133206
0.34
1.66
Glutaric acid
ME133207
0.36
1.64
Cyclohexylamine
ME133220
0.64
1.54
Leucinic acid
ME133219
0.64
1.55
Suberic acid
ME133218
0.55
1.45
5-Oxohexanoic acid
ME133216
0.53
1.47
Malonic acid
ME133215
0.52
1.48
Sedoheptulose 7-phosphate
ME133214
0.49
1.51
Adipic acid
ME133213
0.46
1.54
Fructose 6-phosphate
ME133211
0.45
1.55
Glucose 1-phosphate
ME133212
0.45
1.55
XMP
ME133347
1.00
NA
sn-glycero-3-phosphocholine
ME133355
1.00
NA
Methylimidazoleacetic acid
ME133354
1.00
NA
Hypoxanthine
ME133353
1.00
NA
Gamma-Aminobutyric acid
ME133349
1.00
NA
Fumaric acid
ME133346
1.00
NA
Creatinine
ME133350
1.00
NA
Creatine
ME133352
1.00
NA
1-Aminocyclopropanecarboxylic acid
ME133348
1.00
NA
Agmatine
ME133351
1.00
NA
Pantothenic acid
ME133343
1.28
0.15
N8-Acetylspermidine
ME133340
1.24
0.29
Xanthosine
ME133335
1.21
0.37
His-Glu
ME133237
0.90
1.29
GDP
ME133226
0.72
1.28
2-Phosphoglyceric acid
ME133227
0.73
1.27
CMP
ME133228
0.73
1.27
Hydroxypropionic acid
ME133232
0.77
1.23
Succinic acid
ME133231
0.77
1.23
beta-hydroxybutyric acid
ME133230
0.76
1.24
Citraconic acid
ME133229
0.75
1.25
Phosphoenolpyruvic acid
ME133238
0.83
1.17
Levulinic acid
ME133241
0.86
1.14
Benzoic acid
ME133239
0.84
1.16
Lysine
ME133240
0.85
1.15
dTDP
ME133233
0.76
1.16
Phosphoserine
ME133236
0.81
1.19
Cytosine
ME133234
0.79
1.21
m-Toluic acid
ME133235
0.80
1.20
UDP
ME133217
0.47
1.27
Guanosine
ME133225
0.76
1.36
Guanine
ME133223
0.60
1.27
N-Acetyl-Glucosamine 6-Phosphate
ME133224
0.65
1.35
2-Hydroxyisobutyric acid
ME133221
0.62
1.38
Sebacic acid
ME133222
0.63
1.37
Riboflavin
ME133261
1.00
1.00
NAD+
ME133263
1.01
0.99
Acetyl CoA_divalent
ME133264
1.01
0.99
Glycerol 3-phosphate
ME133262
1.01
0.99
trans-Ferlic acid
ME133257
0.97
1.03
ADP
ME133260
0.99
1.01
PGE2
ME133259
0.98
1.02
Undecylic acid
ME133258
0.98
1.02
Thiamine
ME133253
0.95
1.05
Tiglic acid
ME133254
0.96
1.05
DL-2-hydroxy valeric acid
ME133256
0.96
1.04
Hydrocinnamic acid
ME133255
0.96
1.04
Cyclohexanecarboxylic acid
ME133250
0.93
1.07
Ketoleucine/3-Methyl-2-oxovaleric acid
ME133251
0.94
1.06
Mannosamine
ME133252
0.94
1.06
AMP
ME133243
0.88
1.12
Glycolic acid
ME133242
0.88
1.12
2-Carboxybenzaldehyde
ME133249
0.92
1.08
β-Ala-Lys
ME133248
0.92
1.08
Threonine
ME133244
0.91
1.09
Quinic acid
ME133246
0.91
1.09
ADP-glucose/GDP-fucose
ME133247
0.91
1.09
Glutamine
ME133245
0.91
1.09
Gly-Gly
ME133292
1.11
0.68
Malic acid
ME133272
1.08
0.92
NADP+
ME133273
1.09
0.91
Lactic acid
ME133275
1.09
0.91
Heptylic acid
ME133276
1.09
0.91
Caprylic acid
ME133274
1.09
0.91
Diethanolamine
ME133277
1.09
0.91
Thiamine phosphate
ME133265
1.04
0.96
Ala-Ala
ME133271
1.07
0.93
Pelargonic acid
ME133270
1.07
0.93
Lauric acid
ME133267
1.06
0.94
FAD_divalent
ME133266
1.06
0.94
Azelaic acid
ME133268
1.06
0.94
Capric acid
ME133269
1.06
0.94
Adenine
ME133290
1.20
0.80
Butyric acid
ME133291
1.20
0.80
ppGpp_divalent
ME133289
1.19
0.81
Urea
ME133288
1.18
0.82
Gly-Leu
ME133287
1.18
0.82
Ribulose-5-phosphate
ME133286
1.18
0.82
Pyridoxamine
ME133278
1.11
0.89
Propionic acid
ME133281
1.13
0.87
Caproic acid
ME133279
1.12
0.88
Glyceric acid
ME133280
1.12
0.88
Tyr-Glu
ME133282
1.14
0.86
2,6-diaminopimelic acid
ME133285
1.16
0.84
5-Oxoproline
ME133283
1.15
0.85
Arginine
ME133284
1.15
0.85
Adenosine
ME133342
1.75
0.25
Choline
ME133345
1.87
0.13
Phthalic acid
ME133344
1.84
0.16
Methionine
ME133336
1.54
0.46
UDP-glucuronic acid
ME133334
1.52
0.48
Inosine
ME133332
1.51
0.49
Tyrosine
ME133333
1.51
0.49
β-Alanine
ME133341
1.64
0.36
Tryptophan
ME133337
1.58
0.42
Alanine
ME133339
1.59
0.41
Serine
ME133338
1.59
0.41
Methyl sulfate
ME133320
1.39
0.61
Leucine
ME133319
1.39
0.61
Methionine sulfoxide
ME133318
1.39
0.61
UMP
ME133313
1.36
0.64
S-Adenosylmethionine
ME133317
1.38
0.62
ADP-ribose
ME133314
1.37
0.63
GMP
ME133315
1.37
0.63
Urocanic acid
ME133331
1.48
0.52
Glycine
ME133330
1.47
0.53
Pyridoxal
ME133329
1.46
0.54
Asparagine
ME133321
1.41
0.59
Phenylalanine
ME133322
1.41
0.59
Spermidine
ME133325
1.42
0.58
Glutamic acid
ME133323
1.42
0.58
Isobutyryl CoA_divalent
ME133324
1.42
0.58
Isoleucine
ME133328
1.45
0.55
5^-Methylthioadenosine
ME133326
1.43
0.57
Valine
ME133327
1.44
0.56
Ser-Glu
ME133316
1.28
0.58
Proline
ME133295
1.25
0.75
Isovaleric acid
ME133293
1.24
0.76
Triethanolamine
ME133294
1.24
0.76
Niacinamide
ME133302
1.29
0.71
5-hydroxylysine
ME133300
1.29
0.71
Homoserinelactone
ME133301
1.29
0.71
Carboxymethyllysine
ME133303
1.30
0.70
Ribose-5-phosphate
ME133304
1.30
0.70
Gluconic acid
ME133299
1.28
0.72
Pyridoxamine 5^-phosphate
ME133298
1.28
0.72
Gly-Asp
ME133297
1.27
0.73
Ornithine
ME133296
1.27
0.73
Aspartic acid
ME133312
1.35
0.65
N-Acetylornithine
ME133311
1.34
0.66
Glu-Glu
ME133309
1.33
0.67
Thr-Asp
ME133310
1.33
0.67
Citrulline
ME133306
1.31
0.69
Histidine
ME133305
1.31
0.69
IMP
ME133308
1.32
0.68
Pyridoxine
ME133307
1.32
0.68
Factors:
F1
Treatment:-
F2
Treatment:pABA (1 mg/ml)
Data matrix
UCSD Metabolomics Workbench, a resource sponsored by the Common Fund of the National Institutes of Health
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