Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for M-CMV infected Nicotiana tabacum (Study ST000497)

GC POSITIVE ION MODE (Analysis AN000765)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7
allantoin	ME155888	0.28	1.38	0.09	4.09	0.37	1.47	2.90
cyano-alanine	ME155904	0.15	0.63	0.13	3.99	0.33	2.06	3.93
asparagine	ME155895	0.12	0.47	0.07	3.08	0.34	3.47	3.85
arginine	ME155893	0.14	0.58	0.09	3.44	0.18	1.64	5.21
glutamine	ME155920	0.12	0.52	0.08	2.60	0.19	2.47	5.44
2-aminoadipate	ME155879	0.27	1.82	0.20	1.42	0.20	5.10	1.67
citrate	ME155903	0.46	2.79	0.06	0.63	0.02	5.70	0.05
alpha-tocopherol	ME155890	0.75	1.06	2.46	0.80	1.41	1.04	0.74
trizma acetate	ME155957	1.64	0.91	0.05	0.39	0.10	0.42	0.28
sorbitol	ME155952	0.58	3.92	0.22	1.78	0.31	1.38	0.89
glycine	ME155924	0.57	2.75	0.36	0.89	0.40	1.24	2.96
mannose-6-phosphate	ME155930	0.64	2.44	0.18	0.97	0.18	3.48	0.89
phosphate	ME155940	0.67	2.55	0.14	1.11	0.11	3.01	1.09
glucose-6-phosphate (G6P)	ME155918	0.59	3.12	0.10	1.81	0.07	2.83	0.54
nicotianamine	ME155934	0.69	2.82	0.09	1.36	0.15	3.04	0.39
methylphosphate	ME155931	0.71	1.97	0.35	1.42	0.33	2.41	1.23
3-deoxyoctulosonate	ME155885	0.71	2.17	0.20	1.13	0.32	2.44	1.46
aspartate	ME155896	0.62	2.24	0.25	1.42	0.33	2.42	1.61
mannitol	ME155929	0.68	2.46	0.27	1.59	0.25	2.31	1.03
ribose	ME155948	0.63	2.51	0.27	1.45	0.24	2.58	1.16
2-aminobutyrate	ME155880	0.69	2.44	0.19	1.40	0.33	2.06	1.47
xylonate	ME155958	0.70	2.64	0.19	1.27	0.45	2.10	1.15
succinate	ME155954	0.59	2.59	0.21	2.08	0.25	2.32	0.99
2-hydroxyglutarate	ME155881	0.80	2.79	0.22	1.50	0.26	1.99	0.46
alpha-ketoglutarate	ME155889	0.62	3.12	0.23	1.68	0.31	1.89	1.05
fructose-6-phosphate	ME155912	0.66	2.93	0.36	1.58	0.21	2.13	0.80
threonate	ME155956	0.84	2.61	0.15	1.02	0.35	2.11	0.73
citramalate	ME155902	0.95	2.59	0.50	0.79	0.27	1.97	0.22
dehydroascorbate	ME155906	0.91	2.54	0.39	0.93	0.29	1.95	0.41
myo-inositol	ME155932	1.08	1.92	0.35	0.75	0.60	1.47	0.46
erythronate*	ME155909	0.96	1.79	0.46	0.84	0.53	1.77	0.86
xylose	ME155959	0.91	1.97	0.31	0.94	0.56	1.92	0.85
inositol 1-phosphate (I1P)	ME155926	0.86	2.36	0.57	1.19	0.30	1.76	0.67
shikimate	ME155951	0.91	2.10	0.31	1.18	0.45	1.93	0.61
fructose	ME155911	0.83	1.81	0.21	0.90	1.02	2.10	0.95
glucose	ME155917	0.76	2.15	0.23	0.84	0.92	2.45	0.84
arabinose	ME155891	0.72	1.61	0.50	1.21	0.50	2.83	1.00
malate	ME155928	0.86	2.11	0.49	1.02	0.44	2.31	0.47
quinate	ME155946	0.88	1.74	0.22	1.20	0.43	2.52	0.57
N-acetylglucosamine	ME155933	0.59	2.07	0.30	1.34	0.30	3.08	1.35
alanine	ME155887	0.56	1.93	0.35	1.34	0.33	2.83	1.83
gamma-aminobutyrate (GABA)	ME155915	0.57	1.62	0.25	1.21	0.40	3.10	2.00
pipecolate	ME155943	0.47	1.58	0.17	2.30	0.21	2.80	2.09
guanine	ME155925	0.54	2.32	0.27	1.83	0.32	2.15	1.89
ornithine	ME155937	0.54	2.40	0.18	1.44	0.43	2.28	2.01
beta-alanine	ME155897	0.51	1.87	0.21	1.85	0.27	2.39	2.36
orotidine	ME155938	0.61	1.71	0.34	1.77	0.42	2.38	1.73
putrescine	ME155944	0.60	1.71	0.30	1.52	0.49	2.29	2.07
phenethylamine	ME155939	0.51	1.12	0.57	2.01	0.87	1.76	2.63
lysine	ME155927	0.35	1.30	0.31	1.80	0.25	2.77	3.45
serine	ME155950	0.48	1.35	0.32	1.33	0.57	2.75	2.78
caffeate	ME155900	0.61	0.93	1.29	2.40	1.05	1.00	1.66
diethanolamine	ME155907	0.72	2.18	0.45	2.21	0.43	0.87	1.53
arabitol	ME155892	0.68	2.12	0.38	2.24	0.27	1.56	1.34
glutamate	ME155919	0.67	2.00	0.31	2.10	0.29	1.73	1.52
1,6-anhydroglucose	ME155875	0.88	1.93	0.46	1.23	0.78	1.24	1.10
ascorbate (Vitamin C)	ME155894	1.09	1.73	0.36	1.27	0.53	1.05	0.55
pyruvate	ME155945	0.83	2.57	0.44	1.28	0.50	1.03	1.19
2-linoleoylglycerol (2-monolinolein)	ME155882	1.05	2.47	0.50	0.65	0.50	1.08	0.50
fumarate	ME155914	1.03	2.59	0.35	1.30	0.33	0.84	0.40
1-palmitoylglycerol (1-monopalmitin)	ME155877	1.04	1.33	0.81	0.80	0.52	0.63	1.68
1-stearoylglycerol (1-monostearin)	ME155878	1.00	1.40	0.81	0.81	0.53	0.62	1.86
glycerol 3-phosphate (G3P)	ME155923	0.92	1.62	0.51	1.02	0.37	1.62	1.36
1-myristoylglycerol (1-monomyristin)	ME155876	1.03	1.43	0.81	0.79	0.57	0.88	1.32
2-stearoylglycerol (2-monostearin)	ME155884	0.98	1.44	0.67	0.88	0.57	1.18	1.36
ribitol	ME155947	0.93	1.43	0.88	0.97	0.59	1.23	1.31
2-palmitoylglycerol (2-monopalmitin)	ME155883	0.96	1.15	0.62	0.73	0.74	1.20	1.82
beta-hydroxypyruvate	ME155898	0.91	1.31	0.54	0.95	0.93	1.41	1.42
nicotinamide	ME155935	0.92	1.26	0.52	1.67	0.51	0.85	1.69
nicotinate	ME155936	0.86	1.51	0.61	1.47	0.70	1.11	1.47
threitol	ME155955	0.85	1.49	0.84	1.46	0.48	1.39	1.22
glycerol	ME155922	0.80	1.82	0.49	1.29	0.45	1.24	1.94
5-aminovalerate	ME155886	0.67	1.60	0.34	1.89	0.50	1.73	1.94
erythritol	ME155908	0.72	1.47	0.58	1.66	0.51	1.80	1.65
ethanolamine	ME155910	0.74	1.75	0.49	1.66	0.42	1.53	1.68
fucosterol	ME155913	1.11	1.31	0.76	0.92	0.78	0.82	0.77
phytonadione (Vitamin K1)	ME155942	1.10	1.45	0.79	0.88	0.83	0.78	0.69
cycloartenol	ME155905	1.24	1.46	0.57	1.08	0.71	0.52	0.22
ribulose	ME155949	1.22	1.40	0.47	0.86	0.64	0.89	0.40
gamma-tocopherol	ME155916	0.92	1.35	1.35	0.83	0.89	1.21	0.83
phytol	ME155941	0.87	1.42	1.18	1.25	1.31	1.08	0.53
beta-sitosterol	ME155899	1.00	1.22	0.77	1.20	1.25	0.81	0.76
campesterol	ME155901	0.97	1.11	0.98	1.05	1.28	0.78	0.99
stigmasterol	ME155953	1.02	1.12	1.03	0.93	1.27	0.73	0.81
1,3-dihydroxyacetone	ME155874	0.90	1.18	0.42	0.95	1.70	1.26	1.07
glycerate	ME155921	0.76	1.73	1.00	0.90	1.13	1.71	0.97

Factors:

F1	Treatment:control \| Sample_description:-
F2	Treatment:Infected \| Sample_description:complete green recovery
F3	Treatment:Infected \| Sample_description:mosaic
F4	Treatment:Infected \| Sample_description:patial green recovery
F5	Treatment:Infected \| Sample_description:secondary mosaic
F6	Treatment:Infected \| Sample_description:vein clearing
F7	Treatment:Infected \| Sample_description:white chlorosis

Data matrix