Clustering data with hclust algorithm for TCA cycle metabolomics of H3K27M cells grown in regular glutamine media, glutamine free media, and glutamine free media with alpha-ketoglutarate (Part-II) (Study ST001024)
GC POSITIVE ION MODE (Analysis AN001681)Metabolite | Structure | F1 | F2 | F3 | F4 | F5 | F6 | F7 | F8 | F9 | F10 | F11 | F12 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2-Hydroxyglutarate | ME249994 | 0.06 | 0.13 | 0.13 | 0.06 | 0.05 | 1.60 | 0.07 | 0.07 | 0.85 | 0.19 | 0.11 | 8.68 |
Ketoglutarate | ME249991 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.11 | 0.00 | 0.00 | 6.45 | 0.02 | 0.01 | 5.40 |
Succinate | ME249988 | 0.16 | 0.03 | 0.07 | 0.13 | 0.09 | 0.47 | 0.16 | 0.08 | 3.86 | 0.93 | 0.35 | 5.67 |
Aspartate | ME249993 | 4.42 | 0.09 | 0.32 | 0.69 | 0.11 | 0.04 | 5.99 | 0.04 | 0.20 | 0.04 | 0.03 | 0.03 |
Glutamate | ME249995 | 1.68 | 0.11 | 0.41 | 1.29 | 0.10 | 0.71 | 2.93 | 0.02 | 0.62 | 0.06 | 0.01 | 4.06 |
Citrate | ME249997 | 0.11 | 0.07 | 0.14 | 0.14 | 0.07 | 0.15 | 1.59 | 1.30 | 2.19 | 3.19 | 2.02 | 1.01 |
cis-Aconitic Acid | ME249996 | 0.04 | 0.02 | 0.04 | 0.04 | 0.02 | 0.05 | 3.01 | 0.77 | 1.25 | 3.14 | 2.86 | 0.76 |
Lactate | ME249987 | 0.02 | 0.01 | 0.01 | 0.08 | 0.09 | 0.03 | 2.32 | 2.00 | 1.53 | 2.66 | 2.79 | 0.45 |
Isocitrate | ME249998 | 0.44 | 0.44 | 0.59 | 0.44 | 0.44 | 0.59 | 1.68 | 0.47 | 0.99 | 2.54 | 1.76 | 1.28 |
Fumarate | ME249989 | 1.34 | 0.38 | 0.78 | 0.86 | 0.31 | 0.48 | 1.63 | 0.57 | 1.91 | 2.05 | 0.90 | 0.80 |
Malate | ME249992 | 2.21 | 0.19 | 0.82 | 0.91 | 0.15 | 0.75 | 1.38 | 0.33 | 1.97 | 1.94 | 0.68 | 0.69 |
Factors:
F1 | Sample type:Cells | Grouping:IV Control |
F2 | Sample type:Cells | Grouping:IV Treatment 1 |
F3 | Sample type:Cells | Grouping:IV Treatment 2 |
F4 | Sample type:Cells | Grouping:XVII Control |
F5 | Sample type:Cells | Grouping:XVII Treatment 1 |
F6 | Sample type:Cells | Grouping:XVII Treatment 2 |
F7 | Sample type:Media | Grouping:IV Control |
F8 | Sample type:Media | Grouping:IV Treatment 1 |
F9 | Sample type:Media | Grouping:IV Treatment 2 |
F10 | Sample type:Media | Grouping:XVII Control |
F11 | Sample type:Media | Grouping:XVII Treatment 1 |
F12 | Sample type:Media | Grouping:XVII Treatment 2 |