Clustering data with hclust algorithm for Metabolome Profiling of Synechococcus elongatus PCC 11801 strains engineered for Succinate Production (Study ST001298)
Reversed phase NEGATIVE ION MODE (Analysis AN002162)| Metabolite | Structure | F1 | F2 | F3 | F4 |
|---|---|---|---|---|---|
| ADP-glucose | ME303864 | 0.33 | 3.76 | 0.46 | 0.23 |
| GLY | ME303878 | 0.02 | 3.94 | 0.01 | 0.51 |
| CMP-NAc-neuraminic acid | ME303873 | 0.36 | 2.51 | 0.32 | 0.90 |
| NAD+ | ME303896 | 0.36 | 2.01 | 0.49 | 1.07 |
| XMP | ME303894 | 0.00 | 2.16 | 0.00 | 1.42 |
| 3-OXOHEXANOYL CoA | ME303859 | 0.00 | 1.65 | 0.00 | 1.67 |
| UDP-NAc-muraminate | ME303869 | 0.00 | 1.59 | 0.00 | 1.70 |
| 6PG | ME303857 | 1.99 | 0.01 | 1.67 | 0.66 |
| SBP | ME303854 | 1.73 | 0.03 | 2.06 | 0.59 |
| SUCROSE | ME303863 | 0.76 | 1.19 | 0.61 | 1.22 |
| SUCROSE-6-P | ME303862 | 0.66 | 1.28 | 0.60 | 1.23 |
| FAD | ME303898 | 0.82 | 1.56 | 0.73 | 0.95 |
| UDP-NAc-glucosamine | ME303868 | 0.80 | 1.38 | 0.79 | 1.01 |
| ACETYL CoA | ME303860 | 1.12 | 1.42 | 0.84 | 0.81 |
| RuBP | ME303850 | 1.03 | 1.25 | 0.90 | 0.91 |
| NADP+ | ME303897 | 1.32 | 0.58 | 1.98 | 0.56 |
| dTDP-Rhamnose | ME303870 | 1.35 | 0.73 | 1.80 | 0.56 |
| GSSG | ME303882 | 1.37 | 0.87 | 1.67 | 0.55 |
| ADP-ribose 1,2 cyclic P | ME303874 | 1.20 | 0.84 | 1.58 | 0.69 |
| UDP-glucose | ME303865 | 1.16 | 0.77 | 1.69 | 0.69 |
| GDP-Mannose | ME303872 | 1.21 | 0.72 | 1.83 | 0.62 |
| UDP-Glucuronate | ME303866 | 1.08 | 0.75 | 1.80 | 0.69 |
| UDP-Xylose | ME303867 | 0.98 | 0.89 | 1.43 | 0.84 |
| GLN | ME303877 | 0.92 | 1.05 | 0.99 | 1.02 |
| SUCCINATE | ME303861 | 1.02 | 0.75 | 1.25 | 0.99 |
| GLU | ME303876 | 1.09 | 0.64 | 1.06 | 1.11 |
| GABA | ME303880 | 1.07 | 0.66 | 1.04 | 1.11 |
| PROGLUTAMATE | ME303881 | 1.06 | 0.64 | 1.04 | 1.13 |
| F6P | ME303853 | 0.90 | 0.88 | 1.05 | 1.09 |
| G6P | ME303856 | 0.93 | 0.81 | 1.03 | 1.11 |
| ASP | ME303875 | 1.06 | 0.76 | 1.06 | 1.06 |
| GDP-Fucose | ME303871 | 1.06 | 0.85 | 1.06 | 1.02 |
| S7P | ME303855 | 1.01 | 0.87 | 1.00 | 1.06 |
| FBP | ME303852 | 1.28 | 0.61 | 1.32 | 0.89 |
| CDP | ME303887 | 1.13 | 0.43 | 1.41 | 1.02 |
| DEOXY-TMP | ME303895 | 1.08 | 0.50 | 1.40 | 1.01 |
| N-Acetyl-GLU | ME303879 | 1.11 | 0.53 | 1.18 | 1.09 |
| N-Acetyl-Glucosamine-6-P | ME303899 | 1.09 | 0.47 | 1.25 | 1.10 |
| ADP | ME303884 | 1.20 | 0.57 | 1.24 | 0.99 |
| ATP | ME303885 | 1.20 | 0.62 | 1.24 | 0.97 |
| UDP | ME303889 | 1.22 | 0.51 | 1.27 | 1.00 |
| 3PGA | ME303851 | 1.17 | 0.48 | 1.25 | 1.04 |
| GDP | ME303891 | 1.18 | 0.49 | 1.30 | 1.02 |
| GMP | ME303890 | 1.14 | 0.19 | 1.76 | 0.96 |
| CMP | ME303886 | 1.13 | 0.31 | 1.54 | 1.01 |
| IMP | ME303893 | 1.03 | 0.35 | 1.51 | 1.05 |
| AMP | ME303883 | 1.25 | 0.33 | 1.57 | 0.93 |
| UMP | ME303888 | 1.14 | 0.43 | 1.58 | 0.93 |
| GTP | ME303892 | 1.59 | 0.38 | 1.57 | 0.73 |
| PEP | ME303858 | 1.51 | 0.38 | 1.23 | 0.94 |
Factors:
| F1 | Genotype:△DOP62_03525 PpsbaI OgdA PpsbaIII SsaD Pcpcb300 PEPC SmR |
| F2 | Genotype:△DOP62_03525 PpsbaI OgdA PpsbaIII SsaD Pcpcb300 PEPC SmR , DDOP62_03790 Prbcl400 gltA Prbcl400 SBPase/FBPase KanR |
| F3 | Genotype:△DOP62_03525 PpsbaI OgdA PpsbaIII SsaD SmR |
| F4 | Genotype:Wild type |
