Clustering data with hclust algorithm for Aromatic amino acid metabolism by the anaerobic gut bacterium Clostridium sporogenes (Study ST001606)

GC UNSPECIFIED ION MODE (Analysis AN002639)
MetaboliteStructureF1F2F3F4F5F6F7F8
4-hydroxyhippuric acid NISTME3812340.260.350.310.270.300.330.608.64
hippuric acidME3811610.050.060.050.050.020.110.2011.77
indole-3-propionateME3811530.051.150.050.700.015.360.220.10
3-(4-hydroxyphenyl)propionic acidME3812470.034.040.021.730.010.090.012.77
hydrocinnamic acidME3811590.124.370.112.030.760.140.040.04
4-hydroxybenzoateME3812371.011.030.580.860.090.130.815.13
thymineME3810620.540.750.470.440.170.181.895.27
ketohexoseME3811450.690.700.770.450.410.384.000.33
aconitic acidME3812250.040.050.050.050.070.064.834.10
isothreonic acidME3811470.190.170.200.130.220.304.143.73
pseudo uridineME3810880.220.240.170.190.340.303.724.04
2-deoxytetronic acidME3812590.390.520.390.240.320.273.443.38
2-ketoisocaproic acidME3812530.150.170.840.140.260.273.573.66
isocitric acidME3811510.050.050.060.040.440.594.403.29
5-hydroxy-3-indoleacetic acidME3812300.320.310.320.260.320.324.032.86
allantoic acidME3812210.440.340.430.410.370.423.512.77
uric acidME3810500.180.140.080.100.731.503.672.00
4-hydroxymandelic acidME3812330.200.752.110.160.540.412.022.36
glycolic acidME3811680.600.560.380.311.061.101.763.04
2-hydroxyvaleric acidME3812540.780.720.320.250.550.752.053.63
urocanic acidME3810480.800.570.600.490.260.252.653.32
xanthurenic acidME3810450.450.500.700.410.390.372.573.65
2,3-dihydroxybutanoic acid NISTME3812490.440.460.570.440.720.732.363.12
orotic acidME3811090.610.750.730.650.370.402.263.06
creatinineME3812000.310.220.690.501.140.932.941.47
phenylacetic acidME3810980.820.350.820.360.350.393.631.48
glycocyamineME3811690.320.470.480.330.980.653.501.46
pipecolinic acidME3810920.640.810.440.580.580.503.221.40
threonic acidME3810640.780.650.470.361.050.812.292.00
alpha-ketoglutarateME3812180.490.500.770.580.670.832.292.44
galactitolME3811820.530.540.500.510.680.802.592.42
kynurenic acidME3811440.520.511.310.330.450.442.662.30
adenosineME3812240.690.720.720.700.390.462.612.19
threitolME3810650.840.711.030.600.190.152.722.25
7-methylguanine NISTME3812270.680.690.710.530.250.293.042.32
erythritolME3811890.600.590.740.490.150.173.232.70
fucoseME3811850.570.570.600.440.250.323.192.74
n-acetyl-d-hexosamineME3811200.860.740.360.370.340.403.292.06
nicotinamideME3811150.800.780.340.250.590.532.822.47
putrescineME3810871.000.931.311.080.180.102.381.02
beta-alanineME3812101.041.240.730.610.570.492.091.40
isoriboseME3811480.951.020.930.770.390.501.971.78
keto-hexonic acidME3811460.970.730.800.620.310.882.371.53
indole-3-acetateME3811550.850.940.560.600.620.552.511.60
uracilME3810520.880.810.440.350.810.722.681.53
3-hydroxybutyric acidME3812450.270.110.340.214.671.890.070.09
methanolphosphateME3811261.730.430.460.403.190.680.530.30
cholesterolME3812040.740.810.480.693.371.510.010.01
tocopherol acetateME3810610.700.750.720.783.091.340.130.15
N-methylalanineME3811161.071.580.370.402.351.460.180.32
3,4-dihydroxyhydrocinnamic acid NISTME3812401.010.700.270.192.632.440.060.49
4-hydroxycinnamic acidME3812350.580.590.540.442.472.510.150.52
alanineME3812221.071.030.340.472.342.230.080.07
valineME3810471.211.110.430.512.042.230.050.05
leucineME3811401.151.030.410.542.172.130.110.10
methionineME3811251.201.150.430.482.182.070.080.03
aminomalonateME3812170.831.050.680.552.311.910.170.18
prolineME3810900.971.110.510.722.231.970.070.03
threonineME3810630.950.910.350.382.672.170.120.08
tyrosineME3810541.000.870.330.432.542.340.060.05
glutamineME3811750.580.790.590.542.901.970.140.14
lysineME3811360.750.860.490.552.752.180.020.01
5-methoxytryptamineME3812290.200.220.220.293.303.130.190.10
pyruvic acidME3810850.210.290.170.162.983.100.400.49
mannoseME3811280.290.330.380.312.962.420.680.37
ornithineME3811100.400.450.330.313.472.330.180.20
tryptophanME3810550.490.430.180.283.532.640.030.02
malic acidME3811330.350.260.240.182.453.750.220.25
glucoseME3811780.100.110.090.103.403.650.100.09
lactic acidME3811420.080.060.010.033.383.990.010.08
ascorbic acidME3812140.880.750.640.521.780.291.861.46
3-aminoisobutyric acidME3812460.560.801.160.541.470.991.251.36
phosphoethanolamineME3810950.490.500.650.351.781.391.451.67
serineME3810761.181.140.520.591.631.130.691.20
glycerolME3811730.540.480.440.412.012.030.881.33
salicylic acidME3810770.661.070.840.791.091.710.701.25
2-hydroxyglutaric acidME3812570.620.760.760.431.801.670.861.15
glucose-6-phosphateME3811770.720.610.840.661.571.740.851.02
ureaME3810510.610.880.740.681.411.750.901.06
taurineME3810660.100.200.180.172.772.291.800.14
pimelic acidME3810940.220.170.240.182.012.181.491.84
citric acidME3812020.070.040.020.022.503.141.081.20
adipic acidME3812230.350.380.360.322.252.630.651.10
lactamideME3811430.510.620.620.381.882.730.490.61
4-hydroxyphenylacetic acidME3812322.850.161.720.150.090.081.631.53
3-phenyllactic acidME3812423.940.021.800.060.070.011.690.04
phenylpyruvateME3810963.990.021.800.060.110.101.130.65
phenaceturic acidME3810991.500.031.210.020.850.882.650.79
indole-3-lactateME3811542.420.011.690.010.100.033.270.10
p-hydroxylphenyllactic acidME3811062.570.012.020.010.190.392.370.04
phenylalanineME3810971.941.870.500.711.301.230.030.03
tocopherol alpha-ME3810601.251.231.181.201.700.880.090.12
succinic acidME3810691.411.531.270.441.201.600.100.09
oxoprolineME3811071.471.731.010.701.181.030.300.31
trans-4-hydroxyprolineME3810561.561.871.080.761.000.830.320.31
fumaric acidME3811841.541.481.060.791.161.270.190.18
hexadecaneME3811641.421.351.201.141.031.040.230.30
hydroxycarbamate NISTME3811580.940.941.181.011.561.840.100.07
histidineME3811601.301.370.701.141.711.310.050.04
glycineME3811701.201.190.940.851.451.530.260.28
isoleucineME3811491.351.560.690.661.491.420.330.17
palmitoleic acidME3811041.300.990.611.091.371.810.240.32
myristic acidME3811211.571.200.821.170.951.390.270.38
palmitic acidME3811051.331.250.831.221.241.620.070.08
stearic acidME3810721.371.291.021.201.061.470.110.14
stigmasterolME3810711.471.781.171.650.420.330.400.63
5-methyluridine NISTME3812281.621.301.331.710.420.400.470.58
1-monostearinME3812611.311.501.321.590.620.480.490.50
beta-gentiobioseME3812091.341.531.571.380.390.490.520.64
dihydrocholesterolME3811921.831.610.881.380.860.520.300.38
arachidic acidME3812161.771.801.011.590.340.600.300.34
alpha-aminoadipic acidME3812191.661.901.211.250.350.910.210.20
myo-inositolME3811221.581.631.371.300.500.880.220.20
linoleic acidME3811381.601.540.891.980.590.970.020.02
oleic acidME3811111.751.521.061.670.680.880.020.02
linolenic acidME3811371.571.041.042.111.110.630.050.05
oleamide NISTME3811121.741.420.911.870.920.490.160.14
1-monopalmitinME3812621.220.981.302.010.640.710.520.36
arachidonic acidME3812151.290.911.221.561.121.280.090.21
docosahexaenoic acidME3811911.161.081.261.820.861.100.150.29
octadecanolME3811130.812.031.021.230.890.710.470.73
glycerol-alpha-phosphateME3811710.971.090.780.731.211.081.121.01
capric acidME3812060.771.021.200.881.271.290.770.68
pelargonic acidME3811010.851.091.170.731.351.240.660.83
erythroseME3811880.931.141.210.610.910.811.091.50
enolpyruvate NISTME3811901.111.091.530.640.750.851.070.95
pyrophosphateME3810861.011.121.380.940.930.840.840.91
glyceric acidME3811741.511.100.861.290.790.820.940.46
hydroxylamineME3811571.291.231.581.240.880.780.340.46
cystineME3811981.021.091.221.230.951.100.520.76
2-hydroxypyrazinyl-2-propenoic acid ethyl ester NISTME3812551.061.381.291.051.140.920.410.59
shikimic acidME3810751.101.381.041.121.141.130.410.48
oxalic acidME3811081.051.251.620.731.051.060.340.81
salicylaldehydeME3810780.831.471.610.700.811.130.600.73
heptadecanoic acidME3811651.111.751.100.950.791.130.430.56
dehydroascorbic acidME3811941.361.481.260.510.901.000.700.66
propane-1,3-diol NISTME3810891.061.631.300.760.760.960.680.75
maltotrioseME3811291.550.931.450.980.470.700.841.12
malonic acidME3811321.571.351.160.670.610.750.841.07
2,5-dihydroxypyrazine NISTME3812481.441.471.130.930.630.590.820.97
3-hydroxyphenylacetic acidME3812441.281.371.110.990.670.630.891.12
2-picolinic acidME3812501.201.601.461.090.550.630.500.96
cis-gondoic acidME3812031.451.301.261.060.790.620.650.78
methionine sulfoxideME3811241.301.571.091.010.760.810.580.79
N-acetylglutamateME3811181.331.641.091.140.680.770.490.75
1-methyladenosineME3812631.161.651.171.240.380.380.991.07
lauric acidME3811410.951.401.531.180.620.540.910.81
sinapinic acidME3810741.321.231.451.310.440.510.731.00
succinate semialdehydeME3810701.702.452.440.510.110.110.240.08
3-hydroxypropionic acidME3812431.732.801.740.570.350.370.030.04
4-hydroxybutyric acidME3812361.903.082.040.520.020.030.010.01
alloxanoic acid NISTME3812201.522.241.740.750.360.360.330.49
nicotinic acidME3811141.732.531.291.100.080.110.440.53
3,6-anhydro-D-galactoseME3812391.772.421.351.410.140.210.240.11
maleimideME3811341.682.161.331.280.380.340.270.30
maltitolME3811311.292.082.431.550.030.070.090.10
melezitoseME3811271.342.132.081.520.130.130.180.17
tocopherol gamma-ME3810571.791.591.801.670.130.150.170.51
guanineME3811661.721.551.841.360.240.230.420.40
pentitolME3811001.661.661.761.460.140.180.500.41
lyxitolME3811351.621.791.721.500.020.040.560.57
N-acetylaspartic acidME3811191.481.711.621.630.080.160.570.59
cellobioseME3812051.801.871.301.570.070.140.740.18
behenic acidME3812111.711.991.271.800.140.170.210.49
xyloseME3810421.722.081.561.480.040.050.370.48
5-aminovaleric acidME3812312.102.151.421.820.000.000.100.03
beta-sitosterolME3812081.902.311.292.040.030.010.010.01
2-monooleinME3812521.901.691.471.980.160.260.090.08
zymosterolME3810401.901.591.421.740.290.250.240.28
4-aminobutyric acidME3812382.111.781.921.380.120.090.130.13
hypoxanthineME3811562.041.861.911.540.040.060.090.10
uridineME3810491.602.071.631.820.150.130.100.15
galactinolME3811831.892.081.731.750.000.090.030.03
1-kestoseME3812641.861.951.871.870.000.000.030.03
raffinoseME3810831.892.021.901.750.000.000.020.02
xanthineME3810462.061.951.571.540.070.060.200.24
conduritol-beta-epoxideME3812011.781.961.671.510.120.170.270.21
glycerol-3-galactosideME3811721.781.901.751.710.010.010.280.28
pinitolME3810931.851.991.821.680.000.010.170.13
piperidoneME3810912.572.861.300.540.040.050.150.13
gluconic acidME3811802.662.041.341.260.030.030.160.12
glutamic acidME3811762.302.221.521.420.060.050.020.01
aspartic acidME3812122.502.601.081.180.100.110.020.02
asparagineME3812132.232.231.121.210.290.200.210.19
inosineME3811522.352.361.311.010.110.110.250.18
2-hydroxyhexanoic acidME3812562.691.851.880.820.100.120.080.11
gluconic acid lactoneME3811792.571.861.270.820.330.230.310.34
hexuronic acidME3811622.201.891.651.160.050.070.340.41
parabanic acid NISTME3811021.251.712.321.050.110.080.620.75
tocopherol delta- NISTME3810581.031.162.081.340.420.580.600.66
galactonic acidME3811812.421.981.000.940.050.060.770.64
butyrolactam NISTME3812071.581.831.460.730.460.390.570.98
ribonic acidME3810811.712.071.141.210.080.100.820.77
riboseME3810801.941.721.321.040.240.250.700.66
xylonic acidME3810431.721.661.421.120.220.270.690.82
maltoseME3811301.481.651.071.950.120.210.371.26
sucroseME3810681.081.711.111.890.160.310.621.19
UDP-glucuronic acidME3810531.181.501.591.500.050.091.071.02
quinic acidME3810841.531.581.221.200.080.140.901.58
3,4-dihydroxycinnamic acidME3812411.601.491.231.100.320.340.611.52
ferulic acidME3811861.341.411.431.300.260.260.641.59
cysteineME3811991.391.420.740.490.600.730.373.11
sorbitolME3810731.521.331.181.030.310.321.201.17
xylulose NISTME3810411.341.241.280.840.390.491.211.36
N-acetylmannosamineME3811171.091.151.160.890.410.591.531.31
cytosinME3811971.271.150.870.920.600.531.541.21
ethanolamineME3811871.211.040.910.860.760.701.351.30
levoglucosanME3811391.041.151.241.150.260.421.271.79
daidzeinME3811960.851.121.341.130.120.141.841.77
deoxypentitolME3811931.081.121.391.220.160.151.741.23
xylitolME3810441.201.351.231.140.060.081.601.54
ribitolME3810820.961.001.040.940.100.132.212.03
1,2-cyclohexanedioneME3812601.371.281.030.760.210.231.412.18
pantothenic acidME3811031.431.250.840.770.250.351.382.22
tocopherol beta NISTME3810590.831.181.420.950.550.730.771.95
2-monopalmitinME3812511.361.130.531.150.610.961.011.41
hexitolME3811631.070.870.730.680.581.201.172.17
sulfuric acidME3810672.232.400.740.270.060.610.201.79
saccharic acidME3810792.271.530.860.780.170.201.051.23
isohexonic acidME3811502.611.310.660.570.200.290.981.64
mucic acidME3811232.731.190.800.550.380.350.841.28
2-hydroxybutanoic acidME3812580.780.430.432.541.461.670.170.21
glycyl prolineME3811671.030.911.082.610.190.221.150.68
abietic acidME3812260.741.101.823.820.030.040.030.03
dehydroabietic acidME3811950.931.581.023.950.040.040.020.03

Factors:

F1host_compartment:Cecal Contents | bacterial_genotype:fldC
F2host_compartment:Cecal Contents | bacterial_genotype:WT
F3host_compartment:Feces | bacterial_genotype:fldC
F4host_compartment:Feces | bacterial_genotype:WT
F5host_compartment:Serum | bacterial_genotype:fldC
F6host_compartment:Serum | bacterial_genotype:WT
F7host_compartment:Urine | bacterial_genotype:fldC
F8host_compartment:Urine | bacterial_genotype:WT
Data matrix
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