Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for Metabolomics analysis of plasma from a mouse model of astrocytoma subjected to radiotherapy (Study ST001712)

HILIC NEGATIVE ION MODE (Analysis AN002787)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8
Folate	ME399364	0.49	0.64	4.68	0.42	0.25	0.51	0.59	0.42
UMP	ME399286	0.70	3.55	0.57	0.93	0.39	0.57	0.57	0.72
UDP-D-Xylose	ME399276	0.88	0.96	2.59	0.59	0.86	0.74	0.66	0.68
3-Phosphoglycerate (PGA)--2-PGA	ME399359	0.89	1.00	2.42	0.68	0.97	0.82	0.77	0.46
D-Glycerate 2-phosphate	ME399307	0.89	1.00	2.48	0.65	0.98	0.82	0.74	0.45
N2-Acetyl-L-ornithine	ME399312	0.94	0.97	1.40	0.50	1.04	0.74	2.04	0.38
UDP-D-galacturonate	ME399272	0.78	2.99	1.76	0.66	0.64	0.36	0.80	0.28
N6,N6-Dimethyladenosine	ME399362	1.04	2.22	1.10	0.99	0.55	1.07	0.71	0.32
1,3-Bisphosphoglyceric acid	ME399340	1.16	2.32	1.25	1.22	0.82	0.26	0.73	0.24
cADP-ribose	ME399275	0.76	2.14	1.40	0.88	0.78	0.55	0.98	0.52
NAD cation	ME399268	0.75	2.57	1.45	0.63	0.71	0.48	0.93	0.47
UDP-glucose	ME399273	0.90	2.35	1.37	0.66	0.71	0.45	1.10	0.47
NADH	ME399267	0.91	1.61	1.69	0.61	0.74	0.82	0.67	0.94
ADP	ME399279	0.84	1.69	1.68	0.86	0.75	0.75	0.82	0.62
NADP cation	ME399266	1.04	1.68	1.77	0.65	0.50	0.67	1.01	0.67
D-Glucose 1,6-bisphosphate	ME399283	0.90	1.93	2.18	0.58	0.61	0.53	0.84	0.43
Phosphenopyruvate (PEP), NIB	ME399354	1.34	1.48	2.04	0.64	0.53	0.62	1.08	0.29
CMP-N-acetylneuraminate	ME399269	0.71	1.92	1.21	0.74	0.55	0.69	1.61	0.56
GSSG, Glutathione oxidized	ME399270	0.77	1.62	1.16	0.69	0.60	0.84	1.68	0.64
ADP-D-ribose	ME399274	1.44	1.95	1.21	0.62	0.51	0.64	1.13	0.49
AMP	ME399282	1.41	1.40	1.16	0.76	1.03	0.41	1.33	0.49
GMP (guanosine monophosphate)	ME399281	1.07	1.52	1.15	0.76	1.11	0.54	1.20	0.66
UDP-N-acetylglucosamine	ME399271	1.11	1.63	1.36	0.61	0.84	0.54	1.25	0.67
cAMP	ME399285	1.36	0.74	0.99	0.54	0.38	1.75	1.42	0.81
Hypoxanthine	ME399321	1.60	0.70	1.65	0.84	0.24	1.51	0.85	0.61
dCMP	ME399290	1.74	0.79	1.61	0.66	0.21	1.60	0.88	0.52
Inosine	ME399291	1.89	0.77	1.59	0.64	0.16	1.61	0.86	0.47
dUMP_deoxyuridine monophosphate iso	ME399363	0.72	1.32	0.48	0.67	0.91	1.86	0.72	1.32
D-4-Hydroxy-2-oxoglutarate	ME399345	1.02	0.69	0.51	0.80	1.65	1.08	0.76	1.49
DHAP_Dihydroacetone phosphate	ME399339	1.40	0.81	0.41	1.34	1.39	0.95	0.49	1.21
9-O-Acetylneuraminic acid	ME399343	1.06	1.99	0.64	1.03	0.74	1.04	0.81	0.70
Fumarate	ME399330	1.31	1.64	0.64	1.05	0.79	1.15	0.93	0.51
L-Glutamate	ME399317	0.83	1.35	0.71	0.66	1.02	1.49	1.14	0.80
FAD, Flavin adenine dinucleotide	ME399265	0.85	1.28	0.78	0.80	1.17	0.98	1.27	0.87
Pyruvate	ME399335	0.83	1.42	0.82	0.93	1.18	1.13	0.85	0.84
Pyruvate_	ME399346	0.83	1.41	0.82	0.93	1.18	1.13	0.85	0.84
dTMP	ME399287	0.98	1.63	0.74	1.06	0.99	0.87	0.97	0.75
TMP_Thymidine monophosphate iso	ME399357	1.01	1.62	0.76	1.09	0.99	0.93	0.89	0.72
D-Sedoheptulose 7-phosphate	ME399338	1.18	1.39	1.14	0.74	0.83	1.00	1.17	0.55
D-Arabinose 5-phosphate	ME399344	1.22	1.09	1.17	0.75	0.64	1.33	1.23	0.57
D-Ribose 5-phosphate	ME399302	1.23	1.07	1.20	0.72	0.64	1.33	1.24	0.56
L-Acetylcarnitine	ME399305	1.50	0.96	1.10	0.77	0.70	1.36	0.86	0.75
L-Phenylalanine	ME399296	1.56	1.16	1.08	0.79	0.77	1.13	0.85	0.67
GDP, Guanosine diphosphate	ME399277	1.20	1.58	0.99	0.86	0.63	1.42	0.70	0.62
N-Succinyl-L-glutamate 5-semialdehyde	ME399301	1.00	1.31	0.93	1.18	0.54	1.44	0.82	0.79
Methionine	ME399350	1.39	1.17	1.09	0.90	0.61	1.46	0.77	0.60
L-Ornithine	ME399325	1.31	1.23	1.01	0.94	0.80	1.31	0.80	0.60
Betaine	ME399361	1.33	1.20	1.03	0.99	0.70	1.31	0.80	0.64
L-Valine	ME399358	1.33	1.19	1.03	0.99	0.70	1.31	0.80	0.64
L-Asparagine	ME399326	1.17	1.23	1.05	0.89	0.80	1.26	0.81	0.78
L-Lysine	ME399319	1.16	1.15	0.99	0.87	0.80	1.43	0.85	0.75
L-Arginine	ME399311	1.07	1.24	0.83	0.92	0.83	1.55	0.82	0.74
Gly_Glycine	ME399348	1.00	1.32	1.00	0.98	0.73	1.35	0.86	0.77
L-Serine	ME399355	0.96	1.33	0.95	0.92	0.75	1.43	0.86	0.80
6-Phosphogluconic acid	ME399336	1.08	0.95	1.52	0.83	1.14	0.87	1.01	0.61
dAMP_Deoxyadenosine monophosphate	ME399284	1.00	1.19	1.31	0.67	1.01	0.96	1.01	0.86
Cysteine iso	ME399337	0.99	0.53	1.03	1.23	0.99	1.10	0.99	1.13
GSH, Glutathione	ME399289	0.98	0.59	0.98	1.35	1.04	0.94	1.02	1.10
Thymidine iso	ME399300	1.05	0.92	0.73	1.00	1.07	0.90	0.99	1.35
Pantothenate	ME399304	1.47	1.04	1.13	0.79	0.94	0.94	1.00	0.70
Cytidine diphosphate (CDP)	ME399280	1.45	1.00	1.07	0.70	0.94	1.17	0.80	0.86
Creatine	ME399327	1.35	0.95	1.07	0.83	0.96	1.09	0.95	0.81
D-Fructose 1,6-bisphosphate	ME399342	1.34	0.86	0.98	0.89	1.01	1.19	0.93	0.80
Guanine	ME399314	1.33	1.07	1.00	0.96	0.78	1.15	0.92	0.80
Guanosine II	ME399341	1.31	1.10	0.97	1.05	0.83	1.06	0.88	0.80
L-Histidine	ME399313	1.18	0.97	0.94	0.94	0.95	1.31	0.90	0.81
Citric acid	ME399306	1.14	0.94	0.99	0.96	1.00	1.09	1.01	0.87
Cytidine	ME399299	1.15	1.10	0.91	0.87	0.94	1.19	0.91	0.92
Citrulline	ME399309	1.19	1.09	0.95	0.93	0.94	1.13	0.88	0.89
L-Ornithine_iso	ME399318	1.22	1.08	0.94	0.95	0.93	1.15	0.88	0.86
Deoxyuridine	ME399303	1.23	0.99	0.86	0.96	1.02	1.06	0.92	0.95
L-Glutamine	ME399320	1.22	1.09	0.86	1.01	0.95	1.04	0.96	0.87
N-Acetylcysteine (NAC) main_iso	ME399356	1.02	0.95	1.10	0.93	1.01	0.95	1.00	1.04
2-Deoxy-D-Ribose	ME399322	1.18	0.86	1.05	0.97	1.11	0.93	0.98	0.93
D-Glucose	ME399347	1.32	0.92	0.91	1.01	0.99	0.92	0.94	0.99
Oxaloacetate-CO2,87	ME399352	1.26	0.93	0.97	0.95	1.00	0.97	0.98	0.94
Thiamine cation	ME399293	1.23	0.99	1.00	0.78	1.13	0.86	1.21	0.80
Uracil	ME399331	0.94	0.82	0.85	0.79	1.09	1.10	1.40	1.01
Hypotaurine iso	ME399332	1.01	0.76	0.88	0.88	1.16	1.13	1.09	1.09
Lactate	ME399334	1.19	0.92	0.79	0.85	1.05	1.23	1.01	0.96
Methoxy-4-hydroxyphenylglycolaldehyde I	ME399295	1.13	0.86	1.05	0.77	1.09	1.15	1.05	0.91
Mevalonate	ME399315	0.95	0.84	0.87	0.93	1.30	0.84	1.11	1.16
Taurine	ME399328	1.15	0.93	0.68	1.07	1.12	0.96	1.09	0.98
HNE, Hydroxynonenal	ME399297	1.08	0.93	0.90	0.96	1.15	0.97	1.14	0.88
N-acetylglucosamine.HCl, order 1x more	ME399353	1.09	0.84	0.78	0.93	1.30	0.95	1.11	1.00
2-Hydroxyglutaric acid	ME399316	1.20	1.13	0.73	1.20	1.10	0.85	1.06	0.73
N-Acetylaspartate_NAA	ME399310	1.25	1.14	0.70	1.08	1.09	0.66	1.15	0.92
IDP, Inosine diphosphate	ME399278	0.92	1.14	0.62	1.21	1.04	1.09	1.07	0.91
L-Aspartate	ME399324	0.88	1.12	0.73	1.09	0.96	1.27	1.04	0.91
Succinate	ME399329	1.06	0.95	0.66	1.29	1.04	1.20	0.94	0.86
Cystine	ME399308	1.03	1.01	0.80	1.15	1.03	1.04	0.92	1.02
Mevalonate pyrophosphate (Mevalonate-5PP)	ME399288	1.03	0.92	0.79	1.11	1.00	1.14	0.96	1.05
N-Acetylcysteine (NAC) main	ME399351	1.02	1.12	1.08	1.20	0.90	0.71	1.05	0.92
GABA_y-Aminobutryic acid	ME399333	0.95	1.05	0.89	1.07	1.12	1.01	0.96	0.95
Homocysteine	ME399349	0.93	1.14	0.97	1.15	1.09	0.85	0.99	0.87
Adenosine	ME399292	1.76	1.56	0.60	1.02	0.86	0.66	1.09	0.45
aKG_oxoglutarate	ME399360	2.08	0.91	0.83	0.87	0.79	0.64	1.10	0.79
y-Glu-Cys iso	ME399298	1.59	1.09	1.37	0.79	0.67	0.84	1.02	0.64
Dihydroxymandelate iso_	ME399294	1.42	1.10	1.01	1.03	1.12	0.95	0.81	0.57
Malate	ME399323	1.80	1.01	0.94	0.94	0.99	1.01	0.84	0.47

Factors:

F1	Treatment:Ctrl \| Time:RT+12
F2	Treatment:Ctrl \| Time:RT+24
F3	Treatment:Ctrl \| Time:RT-4
F4	Treatment:Ctrl \| Time:RT+4
F5	Treatment:RT \| Time:RT+12
F6	Treatment:RT \| Time:RT+24
F7	Treatment:RT \| Time:RT-4
F8	Treatment:RT \| Time:RT+4

Data matrix