Clustering data with heatmap algorithm for (Study ST000676)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	AGE:16 week | DIET:Control | SAMPLE_TYPE:Dorsal root ganglia
F2	AGE:16 week | DIET:Control | SAMPLE_TYPE:plasma
F3	AGE:16 week | DIET:control | SAMPLE_TYPE:Sciatic nerve
F4	AGE:16 week | DIET:HF | SAMPLE_TYPE:Dorsal root ganglia
F5	AGE:16 week | DIET:HF | SAMPLE_TYPE:plasma
F6	AGE:16 week | DIET:HF | SAMPLE_TYPE:Sciatic nerve
F7	AGE:16 week | DIET:HF STZ | SAMPLE_TYPE:Dorsal root ganglia
F8	AGE:16 week | DIET:HF STZ | SAMPLE_TYPE:plasma
F9	AGE:16 week | DIET:HF STZ | SAMPLE_TYPE:Sciatic nerve
F10	AGE:24 week | DIET:Control | SAMPLE_TYPE:Dorsal root ganglia
F11	AGE:24 week | DIET:Control | SAMPLE_TYPE:plasma
F12	AGE:24 week | DIET:control | SAMPLE_TYPE:Sciatic nerve
F13	AGE:24 week | DIET:HF DR | SAMPLE_TYPE:Dorsal root ganglia
F14	AGE:24 week | DIET:HF DR | SAMPLE_TYPE:plasma
F15	AGE:24 week | DIET:HF DR | SAMPLE_TYPE:Sciatic nerve
F16	AGE:24 week | DIET:HF | SAMPLE_TYPE:Dorsal root ganglia
F17	AGE:24 week | DIET:HF | SAMPLE_TYPE:plasma
F18	AGE:24 week | DIET:HF | SAMPLE_TYPE:Sciatic nerve
F19	AGE:24 week | DIET:HF STZ DR | SAMPLE_TYPE:Dorsal root ganglia
F20	AGE:24 week | DIET:HF STZ DR | SAMPLE_TYPE:plasma
F21	AGE:24 week | DIET:HF STZ DR | SAMPLE_TYPE:Sciatic nerve
F22	AGE:24 week | DIET:HF STZ | SAMPLE_TYPE:Dorsal root ganglia
F23	AGE:24 week | DIET:HF STZ | SAMPLE_TYPE:plasma
F24	AGE:24 week | DIET:HF STZ | SAMPLE_TYPE:Sciatic nerve

Data matrix