Clustering data with heatmap algorithm for (Study ST001350)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Timepoint:10 | Replicate:1
F2Timepoint:10 | Replicate:2
F3Timepoint:10 | Replicate:3
F4Timepoint:10 | Replicate:4
F5Timepoint:10 | Replicate:5
F6Timepoint:11 | Replicate:1
F7Timepoint:11 | Replicate:2
F8Timepoint:11 | Replicate:3
F9Timepoint:11 | Replicate:4
F10Timepoint:11 | Replicate:5
F11Timepoint:12 | Replicate:1
F12Timepoint:12 | Replicate:2
F13Timepoint:12 | Replicate:3
F14Timepoint:12 | Replicate:4
F15Timepoint:12 | Replicate:5
F16Timepoint:13 | Replicate:1
F17Timepoint:13 | Replicate:2
F18Timepoint:13 | Replicate:3
F19Timepoint:13 | Replicate:4
F20Timepoint:13 | Replicate:5
F21Timepoint:14 | Replicate:1
F22Timepoint:14 | Replicate:2
F23Timepoint:14 | Replicate:3
F24Timepoint:14 | Replicate:4
F25Timepoint:14 | Replicate:5
F26Timepoint:15 | Replicate:1
F27Timepoint:15 | Replicate:2
F28Timepoint:15 | Replicate:3
F29Timepoint:15 | Replicate:4
F30Timepoint:15 | Replicate:5
F31Timepoint:16 | Replicate:1
F32Timepoint:16 | Replicate:2
F33Timepoint:16 | Replicate:3
F34Timepoint:16 | Replicate:4
F35Timepoint:16 | Replicate:5
F36Timepoint:17 | Replicate:1
F37Timepoint:17 | Replicate:2
F38Timepoint:17 | Replicate:3
F39Timepoint:17 | Replicate:4
F40Timepoint:17 | Replicate:5
F41Timepoint:18 | Replicate:1
F42Timepoint:18 | Replicate:2
F43Timepoint:18 | Replicate:3
F44Timepoint:18 | Replicate:4
F45Timepoint:18 | Replicate:5
F46Timepoint:19 | Replicate:1
F47Timepoint:19 | Replicate:2
F48Timepoint:19 | Replicate:3
F49Timepoint:19 | Replicate:4
F50Timepoint:19 | Replicate:5
F51Timepoint:1 | Replicate:1
F52Timepoint:1 | Replicate:2
F53Timepoint:1 | Replicate:3
F54Timepoint:1 | Replicate:4
F55Timepoint:1 | Replicate:5
F56Timepoint:20 | Replicate:1
F57Timepoint:20 | Replicate:2
F58Timepoint:20 | Replicate:3
F59Timepoint:20 | Replicate:4
F60Timepoint:20 | Replicate:5
F61Timepoint:21 | Replicate:1
F62Timepoint:21 | Replicate:2
F63Timepoint:21 | Replicate:3
F64Timepoint:21 | Replicate:4
F65Timepoint:21 | Replicate:5
F66Timepoint:2 | Replicate:1
F67Timepoint:2 | Replicate:2
F68Timepoint:2 | Replicate:3
F69Timepoint:2 | Replicate:4
F70Timepoint:2 | Replicate:5
F71Timepoint:3 | Replicate:1
F72Timepoint:3 | Replicate:2
F73Timepoint:3 | Replicate:3
F74Timepoint:3 | Replicate:4
F75Timepoint:3 | Replicate:5
F76Timepoint:4 | Replicate:1
F77Timepoint:4 | Replicate:2
F78Timepoint:4 | Replicate:3
F79Timepoint:4 | Replicate:4
F80Timepoint:4 | Replicate:5
F81Timepoint:5 | Replicate:1
F82Timepoint:5 | Replicate:2
F83Timepoint:5 | Replicate:3
F84Timepoint:5 | Replicate:4
F85Timepoint:5 | Replicate:5
F86Timepoint:6 | Replicate:1
F87Timepoint:6 | Replicate:2
F88Timepoint:6 | Replicate:3
F89Timepoint:6 | Replicate:4
F90Timepoint:6 | Replicate:5
F91Timepoint:7 | Replicate:1
F92Timepoint:7 | Replicate:2
F93Timepoint:7 | Replicate:3
F94Timepoint:7 | Replicate:4
F95Timepoint:7 | Replicate:5
F96Timepoint:8 | Replicate:1
F97Timepoint:8 | Replicate:2
F98Timepoint:8 | Replicate:3
F99Timepoint:8 | Replicate:4
F100Timepoint:8 | Replicate:5
F101Timepoint:9 | Replicate:1
F102Timepoint:9 | Replicate:2
F103Timepoint:9 | Replicate:3
F104Timepoint:9 | Replicate:4
F105Timepoint:9 | Replicate:5
F106Timepoint:None | Replicate:4
F107Timepoint:None | Replicate:5
Data matrix
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