Clustering data with heatmap algorithm for (Study ST001852)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Strain:A_C. scindens VE202 | Incubation:3-oxo-delta4-LCA | pH:7
F2Strain:A_C. scindens VE202 | Incubation:3-oxo-delta4-LCA | pH:9
F3Strain:A_C. scindens VE202 | Incubation:CDCA | pH:7
F4Strain:A_C. scindens VE202 | Incubation:CDCA | pH:9
F5Strain:A_C. scindens VE202 | Incubation:LCA | pH:7
F6Strain:A_C. scindens VE202 | Incubation:LCA | pH:9
F7Strain:Akkermansia muciniphila St.26 | Incubation:3-oxo-delta4-LCA | pH:7
F8Strain:Akkermansia muciniphila St.26 | Incubation:3-oxo-delta4-LCA | pH:9
F9Strain:Akkermansia muciniphila St.26 | Incubation:CDCA | pH:7
F10Strain:Akkermansia muciniphila St.26 | Incubation:CDCA | pH:9
F11Strain:Akkermansia muciniphila St.26 | Incubation:LCA | pH:7
F12Strain:Akkermansia muciniphila St.26 | Incubation:LCA | pH:9
F13Strain:Akkermansia muciniphila St.27 | Incubation:3-oxo-delta4-LCA | pH:7
F14Strain:Akkermansia muciniphila St.27 | Incubation:3-oxo-delta4-LCA | pH:9
F15Strain:Akkermansia muciniphila St.27 | Incubation:CDCA | pH:7
F16Strain:Akkermansia muciniphila St.27 | Incubation:CDCA | pH:9
F17Strain:Akkermansia muciniphila St.27 | Incubation:LCA | pH:7
F18Strain:Akkermansia muciniphila St.27 | Incubation:LCA | pH:9
F19Strain:Alistipes finegoldii St.15 | Incubation:3-oxo-delta4-LCA | pH:7
F20Strain:Alistipes finegoldii St.15 | Incubation:3-oxo-delta4-LCA | pH:9
F21Strain:Alistipes finegoldii St.15 | Incubation:CDCA | pH:7
F22Strain:Alistipes finegoldii St.15 | Incubation:CDCA | pH:9
F23Strain:Alistipes finegoldii St.15 | Incubation:LCA | pH:7
F24Strain:Alistipes finegoldii St.15 | Incubation:LCA | pH:9
F25Strain:Alistipes finegoldii St.16 | Incubation:3-oxo-delta4-LCA | pH:7
F26Strain:Alistipes finegoldii St.16 | Incubation:3-oxo-delta4-LCA | pH:9
F27Strain:Alistipes finegoldii St.16 | Incubation:CDCA | pH:7
F28Strain:Alistipes finegoldii St.16 | Incubation:CDCA | pH:9
F29Strain:Alistipes finegoldii St.16 | Incubation:LCA | pH:7
F30Strain:Alistipes finegoldii St.16 | Incubation:LCA | pH:9
F31Strain:Alistipes onderdonkii St.17 | Incubation:3-oxo-delta4-LCA | pH:7
F32Strain:Alistipes onderdonkii St.17 | Incubation:3-oxo-delta4-LCA | pH:9
F33Strain:Alistipes onderdonkii St.17 | Incubation:CDCA | pH:7
F34Strain:Alistipes onderdonkii St.17 | Incubation:CDCA | pH:9
F35Strain:Alistipes onderdonkii St.17 | Incubation:LCA | pH:7
F36Strain:Alistipes onderdonkii St.17 | Incubation:LCA | pH:9
F37Strain:Alistipes onderdonkii St.18 | Incubation:3-oxo-delta4-LCA | pH:7
F38Strain:Alistipes onderdonkii St.18 | Incubation:3-oxo-delta4-LCA | pH:9
F39Strain:Alistipes onderdonkii St.18 | Incubation:CDCA | pH:7
F40Strain:Alistipes onderdonkii St.18 | Incubation:CDCA | pH:9
F41Strain:Alistipes onderdonkii St.18 | Incubation:LCA | pH:7
F42Strain:Alistipes onderdonkii St.18 | Incubation:LCA | pH:9
F43Strain:Bacteroides dorei St.6 | Incubation:3-oxo-delta4-LCA | pH:7
F44Strain:Bacteroides dorei St.6 | Incubation:3-oxo-delta4-LCA | pH:9
F45Strain:Bacteroides dorei St.6 | Incubation:CDCA | pH:7
F46Strain:Bacteroides dorei St.6 | Incubation:CDCA | pH:9
F47Strain:Bacteroides dorei St.6 | Incubation:LCA | pH:7
F48Strain:Bacteroides dorei St.6 | Incubation:LCA | pH:9
F49Strain:Bacteroides dorei St.7 | Incubation:3-oxo-delta4-LCA | pH:7
F50Strain:Bacteroides dorei St.7 | Incubation:3-oxo-delta4-LCA | pH:9
F51Strain:Bacteroides dorei St.7 | Incubation:CDCA | pH:7
F52Strain:Bacteroides dorei St.7 | Incubation:CDCA | pH:9
F53Strain:Bacteroides dorei St.7 | Incubation:LCA | pH:7
F54Strain:Bacteroides dorei St.7 | Incubation:LCA | pH:9
F55Strain:Bacteroides thetaiotaomicron St.8 | Incubation:3-oxo-delta4-LCA | pH:7
F56Strain:Bacteroides thetaiotaomicron St.8 | Incubation:3-oxo-delta4-LCA | pH:9
F57Strain:Bacteroides thetaiotaomicron St.8 | Incubation:CDCA | pH:7
F58Strain:Bacteroides thetaiotaomicron St.8 | Incubation:CDCA | pH:9
F59Strain:Bacteroides thetaiotaomicron St.8 | Incubation:LCA | pH:7
F60Strain:Bacteroides thetaiotaomicron St.8 | Incubation:LCA | pH:9
F61Strain:Bacteroides thetaiotaomicron St.9 | Incubation:3-oxo-delta4-LCA | pH:7
F62Strain:Bacteroides thetaiotaomicron St.9 | Incubation:3-oxo-delta4-LCA | pH:9
F63Strain:Bacteroides thetaiotaomicron St.9 | Incubation:CDCA | pH:7
F64Strain:Bacteroides thetaiotaomicron St.9 | Incubation:CDCA | pH:9
F65Strain:Bacteroides thetaiotaomicron St.9 | Incubation:LCA | pH:7
F66Strain:Bacteroides thetaiotaomicron St.9 | Incubation:LCA | pH:9
F67Strain:Bacteroides uniformis St.10 | Incubation:3-oxo-delta4-LCA | pH:7
F68Strain:Bacteroides uniformis St.10 | Incubation:3-oxo-delta4-LCA | pH:9
F69Strain:Bacteroides uniformis St.10 | Incubation:CDCA | pH:7
F70Strain:Bacteroides uniformis St.10 | Incubation:CDCA | pH:9
F71Strain:Bacteroides uniformis St.10 | Incubation:LCA | pH:7
F72Strain:Bacteroides uniformis St.10 | Incubation:LCA | pH:9
F73Strain:Bacteroides uniformis St.11 | Incubation:3-oxo-delta4-LCA | pH:7
F74Strain:Bacteroides uniformis St.11 | Incubation:3-oxo-delta4-LCA | pH:9
F75Strain:Bacteroides uniformis St.11 | Incubation:CDCA | pH:7
F76Strain:Bacteroides uniformis St.11 | Incubation:CDCA | pH:9
F77Strain:Bacteroides uniformis St.11 | Incubation:LCA | pH:7
F78Strain:Bacteroides uniformis St.11 | Incubation:LCA | pH:9
F79Strain:Bacteroides uniformis St.12 | Incubation:3-oxo-delta4-LCA | pH:7
F80Strain:Bacteroides uniformis St.12 | Incubation:3-oxo-delta4-LCA | pH:9
F81Strain:Bacteroides uniformis St.12 | Incubation:CDCA | pH:7
F82Strain:Bacteroides uniformis St.12 | Incubation:CDCA | pH:9
F83Strain:Bacteroides uniformis St.12 | Incubation:LCA | pH:7
F84Strain:Bacteroides uniformis St.12 | Incubation:LCA | pH:9
F85Strain:Bacteroides uniformis St.13 | Incubation:3-oxo-delta4-LCA | pH:7
F86Strain:Bacteroides uniformis St.13 | Incubation:3-oxo-delta4-LCA | pH:9
F87Strain:Bacteroides uniformis St.13 | Incubation:CDCA | pH:7
F88Strain:Bacteroides uniformis St.13 | Incubation:CDCA | pH:9
F89Strain:Bacteroides uniformis St.13 | Incubation:LCA | pH:7
F90Strain:Bacteroides uniformis St.13 | Incubation:LCA | pH:9
F91Strain:B_C.scindens.VPI12708 | Incubation:3-oxo-delta4-LCA | pH:7
F92Strain:B_C.scindens.VPI12708 | Incubation:3-oxo-delta4-LCA | pH:9
F93Strain:B_C.scindens.VPI12708 | Incubation:CDCA | pH:7
F94Strain:B_C.scindens.VPI12708 | Incubation:CDCA | pH:9
F95Strain:B_C.scindens.VPI12708 | Incubation:LCA | pH:7
F96Strain:B_C.scindens.VPI12708 | Incubation:LCA | pH:9
F97Strain:Campylobacter ureolyticus St.25 | Incubation:3-oxo-delta4-LCA | pH:7
F98Strain:Campylobacter ureolyticus St.25 | Incubation:3-oxo-delta4-LCA | pH:9
F99Strain:Campylobacter ureolyticus St.25 | Incubation:CDCA | pH:7
F100Strain:Campylobacter ureolyticus St.25 | Incubation:CDCA | pH:9
F101Strain:Campylobacter ureolyticus St.25 | Incubation:LCA | pH:7
F102Strain:Campylobacter ureolyticus St.25 | Incubation:LCA | pH:9
F103Strain:C_C.HGF2.BeiR | Incubation:3-oxo-delta4-LCA | pH:7
F104Strain:C_C.HGF2.BeiR | Incubation:3-oxo-delta4-LCA | pH:9
F105Strain:C_C.HGF2.BeiR | Incubation:CDCA | pH:7
F106Strain:C_C.HGF2.BeiR | Incubation:CDCA | pH:9
F107Strain:C_C.HGF2.BeiR | Incubation:LCA | pH:7
F108Strain:C_C.HGF2.BeiR | Incubation:LCA | pH:9
F109Strain:Christensenellaceae St.36 | Incubation:3-oxo-delta4-LCA | pH:7
F110Strain:Christensenellaceae St.36 | Incubation:3-oxo-delta4-LCA | pH:9
F111Strain:Christensenellaceae St.36 | Incubation:CDCA | pH:7
F112Strain:Christensenellaceae St.36 | Incubation:CDCA | pH:9
F113Strain:Christensenellaceae St.36 | Incubation:LCA | pH:7
F114Strain:Christensenellaceae St.36 | Incubation:LCA | pH:9
F115Strain:Christensenellaceae St.37 | Incubation:3-oxo-delta4-LCA | pH:7
F116Strain:Christensenellaceae St.37 | Incubation:3-oxo-delta4-LCA | pH:9
F117Strain:Christensenellaceae St.37 | Incubation:CDCA | pH:7
F118Strain:Christensenellaceae St.37 | Incubation:CDCA | pH:9
F119Strain:Christensenellaceae St.37 | Incubation:LCA | pH:7
F120Strain:Christensenellaceae St.37 | Incubation:LCA | pH:9
F121Strain:Clostridiales St.46 | Incubation:3-oxo-delta4-LCA | pH:7
F122Strain:Clostridiales St.46 | Incubation:3-oxo-delta4-LCA | pH:9
F123Strain:Clostridiales St.46 | Incubation:CDCA | pH:7
F124Strain:Clostridiales St.46 | Incubation:CDCA | pH:9
F125Strain:Clostridiales St.46 | Incubation:LCA | pH:7
F126Strain:Clostridiales St.46 | Incubation:LCA | pH:9
F127Strain:Clostridiales St.47 | Incubation:3-oxo-delta4-LCA | pH:7
F128Strain:Clostridiales St.47 | Incubation:3-oxo-delta4-LCA | pH:9
F129Strain:Clostridiales St.47 | Incubation:CDCA | pH:7
F130Strain:Clostridiales St.47 | Incubation:CDCA | pH:9
F131Strain:Clostridiales St.47 | Incubation:LCA | pH:7
F132Strain:Clostridiales St.47 | Incubation:LCA | pH:9
F133Strain:Clostridioides difficile St.50 | Incubation:3-oxo-delta4-LCA | pH:7
F134Strain:Clostridioides difficile St.50 | Incubation:3-oxo-delta4-LCA | pH:9
F135Strain:Clostridioides difficile St.50 | Incubation:CDCA | pH:7
F136Strain:Clostridioides difficile St.50 | Incubation:CDCA | pH:9
F137Strain:Clostridioides difficile St.50 | Incubation:LCA | pH:7
F138Strain:Clostridioides difficile St.50 | Incubation:LCA | pH:9
F139Strain:Clostridium hylemonae St.63 | Incubation:3-oxo-delta4-LCA | pH:7
F140Strain:Clostridium hylemonae St.63 | Incubation:3-oxo-delta4-LCA | pH:9
F141Strain:Clostridium hylemonae St.63 | Incubation:CDCA | pH:7
F142Strain:Clostridium hylemonae St.63 | Incubation:CDCA | pH:9
F143Strain:Clostridium hylemonae St.63 | Incubation:LCA | pH:7
F144Strain:Clostridium hylemonae St.63 | Incubation:LCA | pH:9
F145Strain:Clostridium innocuum St.51 | Incubation:3-oxo-delta4-LCA | pH:7
F146Strain:Clostridium innocuum St.51 | Incubation:3-oxo-delta4-LCA | pH:9
F147Strain:Clostridium innocuum St.51 | Incubation:CDCA | pH:7
F148Strain:Clostridium innocuum St.51 | Incubation:CDCA | pH:9
F149Strain:Clostridium innocuum St.51 | Incubation:LCA | pH:7
F150Strain:Clostridium innocuum St.51 | Incubation:LCA | pH:9
F151Strain:Clostridium scindens St.59 | Incubation:3-oxo-delta4-LCA | pH:7
F152Strain:Clostridium scindens St.59 | Incubation:3-oxo-delta4-LCA | pH:9
F153Strain:Clostridium scindens St.59 | Incubation:CDCA | pH:7
F154Strain:Clostridium scindens St.59 | Incubation:CDCA | pH:9
F155Strain:Clostridium scindens St.59 | Incubation:LCA | pH:7
F156Strain:Clostridium scindens St.59 | Incubation:LCA | pH:9
F157Strain:Clostridium scindens St.60 | Incubation:3-oxo-delta4-LCA | pH:7
F158Strain:Clostridium scindens St.60 | Incubation:3-oxo-delta4-LCA | pH:9
F159Strain:Clostridium scindens St.60 | Incubation:CDCA | pH:7
F160Strain:Clostridium scindens St.60 | Incubation:CDCA | pH:9
F161Strain:Clostridium scindens St.60 | Incubation:LCA | pH:7
F162Strain:Clostridium scindens St.60 | Incubation:LCA | pH:9
F163Strain:Clostridium symbiosum St.65 | Incubation:3-oxo-delta4-LCA | pH:7
F164Strain:Clostridium symbiosum St.65 | Incubation:3-oxo-delta4-LCA | pH:9
F165Strain:Clostridium symbiosum St.65 | Incubation:CDCA | pH:7
F166Strain:Clostridium symbiosum St.65 | Incubation:CDCA | pH:9
F167Strain:Clostridium symbiosum St.65 | Incubation:LCA | pH:7
F168Strain:Clostridium symbiosum St.65 | Incubation:LCA | pH:9
F169Strain:Clostridium symbiosum St.66 | Incubation:3-oxo-delta4-LCA | pH:7
F170Strain:Clostridium symbiosum St.66 | Incubation:3-oxo-delta4-LCA | pH:9
F171Strain:Clostridium symbiosum St.66 | Incubation:CDCA | pH:7
F172Strain:Clostridium symbiosum St.66 | Incubation:CDCA | pH:9
F173Strain:Clostridium symbiosum St.66 | Incubation:LCA | pH:7
F174Strain:Clostridium symbiosum St.66 | Incubation:LCA | pH:9
F175Strain:Corynebacterium striatum St.29 | Incubation:3-oxo-delta4-LCA | pH:7
F176Strain:Corynebacterium striatum St.29 | Incubation:3-oxo-delta4-LCA | pH:9
F177Strain:Corynebacterium striatum St.29 | Incubation:CDCA | pH:7
F178Strain:Corynebacterium striatum St.29 | Incubation:CDCA | pH:9
F179Strain:Corynebacterium striatum St.29 | Incubation:LCA | pH:7
F180Strain:Corynebacterium striatum St.29 | Incubation:LCA | pH:9
F181Strain:D_C.hylemonae.JCM105393 | Incubation:3-oxo-delta4-LCA | pH:7
F182Strain:D_C.hylemonae.JCM105393 | Incubation:3-oxo-delta4-LCA | pH:9
F183Strain:D_C.hylemonae.JCM105393 | Incubation:CDCA | pH:7
F184Strain:D_C.hylemonae.JCM105393 | Incubation:CDCA | pH:9
F185Strain:D_C.hylemonae.JCM105393 | Incubation:LCA | pH:7
F186Strain:D_C.hylemonae.JCM105393 | Incubation:LCA | pH:9
F187Strain:Desulfovibrionaceae St.38 | Incubation:3-oxo-delta4-LCA | pH:7
F188Strain:Desulfovibrionaceae St.38 | Incubation:3-oxo-delta4-LCA | pH:9
F189Strain:Desulfovibrionaceae St.38 | Incubation:CDCA | pH:7
F190Strain:Desulfovibrionaceae St.38 | Incubation:CDCA | pH:9
F191Strain:Desulfovibrionaceae St.38 | Incubation:LCA | pH:7
F192Strain:Desulfovibrionaceae St.38 | Incubation:LCA | pH:9
F193Strain:Desulfovibrionaceae St.39 | Incubation:3-oxo-delta4-LCA | pH:7
F194Strain:Desulfovibrionaceae St.39 | Incubation:3-oxo-delta4-LCA | pH:9
F195Strain:Desulfovibrionaceae St.39 | Incubation:CDCA | pH:7
F196Strain:Desulfovibrionaceae St.39 | Incubation:CDCA | pH:9
F197Strain:Desulfovibrionaceae St.39 | Incubation:LCA | pH:7
F198Strain:Desulfovibrionaceae St.39 | Incubation:LCA | pH:9
F199Strain:E_C.scindens ATCC35704 | Incubation:3-oxo-delta4-LCA | pH:7
F200Strain:E_C.scindens ATCC35704 | Incubation:3-oxo-delta4-LCA | pH:9
F201Strain:E_C.scindens ATCC35704 | Incubation:CDCA | pH:7
F202Strain:E_C.scindens ATCC35704 | Incubation:CDCA | pH:9
F203Strain:E_C.scindens ATCC35704 | Incubation:LCA | pH:7
F204Strain:E_C.scindens ATCC35704 | Incubation:LCA | pH:9
F205Strain:Eggerthella lenta St.33 | Incubation:3-oxo-delta4-LCA | pH:7
F206Strain:Eggerthella lenta St.33 | Incubation:3-oxo-delta4-LCA | pH:9
F207Strain:Eggerthella lenta St.33 | Incubation:CDCA | pH:7
F208Strain:Eggerthella lenta St.33 | Incubation:CDCA | pH:9
F209Strain:Eggerthella lenta St.33 | Incubation:LCA | pH:7
F210Strain:Eggerthella lenta St.33 | Incubation:LCA | pH:9
F211Strain:Eggerthella lenta St.34 | Incubation:3-oxo-delta4-LCA | pH:7
F212Strain:Eggerthella lenta St.34 | Incubation:3-oxo-delta4-LCA | pH:9
F213Strain:Eggerthella lenta St.34 | Incubation:CDCA | pH:7
F214Strain:Eggerthella lenta St.34 | Incubation:CDCA | pH:9
F215Strain:Eggerthella lenta St.34 | Incubation:LCA | pH:7
F216Strain:Eggerthella lenta St.34 | Incubation:LCA | pH:9
F217Strain:Eggerthella lenta St.35 | Incubation:3-oxo-delta4-LCA | pH:7
F218Strain:Eggerthella lenta St.35 | Incubation:3-oxo-delta4-LCA | pH:9
F219Strain:Eggerthella lenta St.35 | Incubation:CDCA | pH:7
F220Strain:Eggerthella lenta St.35 | Incubation:CDCA | pH:9
F221Strain:Eggerthella lenta St.35 | Incubation:LCA | pH:7
F222Strain:Eggerthella lenta St.35 | Incubation:LCA | pH:9
F223Strain:Emergencia timonensis St.48 | Incubation:3-oxo-delta4-LCA | pH:7
F224Strain:Emergencia timonensis St.48 | Incubation:3-oxo-delta4-LCA | pH:9
F225Strain:Emergencia timonensis St.48 | Incubation:CDCA | pH:7
F226Strain:Emergencia timonensis St.48 | Incubation:CDCA | pH:9
F227Strain:Emergencia timonensis St.48 | Incubation:LCA | pH:7
F228Strain:Emergencia timonensis St.48 | Incubation:LCA | pH:9
F229Strain:Emergencia timonensis St.49 | Incubation:3-oxo-delta4-LCA | pH:7
F230Strain:Emergencia timonensis St.49 | Incubation:3-oxo-delta4-LCA | pH:9
F231Strain:Emergencia timonensis St.49 | Incubation:CDCA | pH:7
F232Strain:Emergencia timonensis St.49 | Incubation:CDCA | pH:9
F233Strain:Emergencia timonensis St.49 | Incubation:LCA | pH:7
F234Strain:Emergencia timonensis St.49 | Incubation:LCA | pH:9
F235Strain:Faecalicatena contorta St.64 | Incubation:3-oxo-delta4-LCA | pH:7
F236Strain:Faecalicatena contorta St.64 | Incubation:3-oxo-delta4-LCA | pH:9
F237Strain:Faecalicatena contorta St.64 | Incubation:CDCA | pH:7
F238Strain:Faecalicatena contorta St.64 | Incubation:CDCA | pH:9
F239Strain:Faecalicatena contorta St.64 | Incubation:LCA | pH:7
F240Strain:Faecalicatena contorta St.64 | Incubation:LCA | pH:9
F241Strain:Gordonibacter pamelaeae St.32 | Incubation:3-oxo-delta4-LCA | pH:7
F242Strain:Gordonibacter pamelaeae St.32 | Incubation:3-oxo-delta4-LCA | pH:9
F243Strain:Gordonibacter pamelaeae St.32 | Incubation:CDCA | pH:7
F244Strain:Gordonibacter pamelaeae St.32 | Incubation:CDCA | pH:9
F245Strain:Gordonibacter pamelaeae St.32 | Incubation:LCA | pH:7
F246Strain:Gordonibacter pamelaeae St.32 | Incubation:LCA | pH:9
F247Strain:Hungatella hathewayi St.54 | Incubation:3-oxo-delta4-LCA | pH:7
F248Strain:Hungatella hathewayi St.54 | Incubation:3-oxo-delta4-LCA | pH:9
F249Strain:Hungatella hathewayi St.54 | Incubation:CDCA | pH:7
F250Strain:Hungatella hathewayi St.54 | Incubation:CDCA | pH:9
F251Strain:Hungatella hathewayi St.54 | Incubation:LCA | pH:7
F252Strain:Hungatella hathewayi St.54 | Incubation:LCA | pH:9
F253Strain:Hungatella hathewayi St.55 | Incubation:3-oxo-delta4-LCA | pH:7
F254Strain:Hungatella hathewayi St.55 | Incubation:3-oxo-delta4-LCA | pH:9
F255Strain:Hungatella hathewayi St.55 | Incubation:CDCA | pH:7
F256Strain:Hungatella hathewayi St.55 | Incubation:CDCA | pH:9
F257Strain:Hungatella hathewayi St.55 | Incubation:LCA | pH:7
F258Strain:Hungatella hathewayi St.55 | Incubation:LCA | pH:9
F259Strain:Lachnospiraceae St.56 | Incubation:3-oxo-delta4-LCA | pH:7
F260Strain:Lachnospiraceae St.56 | Incubation:3-oxo-delta4-LCA | pH:9
F261Strain:Lachnospiraceae St.56 | Incubation:CDCA | pH:7
F262Strain:Lachnospiraceae St.56 | Incubation:CDCA | pH:9
F263Strain:Lachnospiraceae St.56 | Incubation:LCA | pH:7
F264Strain:Lachnospiraceae St.56 | Incubation:LCA | pH:9
F265Strain:Lachnospiraceae St.57 | Incubation:3-oxo-delta4-LCA | pH:7
F266Strain:Lachnospiraceae St.57 | Incubation:3-oxo-delta4-LCA | pH:9
F267Strain:Lachnospiraceae St.57 | Incubation:CDCA | pH:7
F268Strain:Lachnospiraceae St.57 | Incubation:CDCA | pH:9
F269Strain:Lachnospiraceae St.57 | Incubation:LCA | pH:7
F270Strain:Lachnospiraceae St.57 | Incubation:LCA | pH:9
F271Strain:Lachnospiraceae St.58 | Incubation:3-oxo-delta4-LCA | pH:7
F272Strain:Lachnospiraceae St.58 | Incubation:3-oxo-delta4-LCA | pH:9
F273Strain:Lachnospiraceae St.58 | Incubation:CDCA | pH:7
F274Strain:Lachnospiraceae St.58 | Incubation:CDCA | pH:9
F275Strain:Lachnospiraceae St.58 | Incubation:LCA | pH:7
F276Strain:Lachnospiraceae St.58 | Incubation:LCA | pH:9
F277Strain:Lachnospiraceae St.61 | Incubation:3-oxo-delta4-LCA | pH:7
F278Strain:Lachnospiraceae St.61 | Incubation:3-oxo-delta4-LCA | pH:9
F279Strain:Lachnospiraceae St.61 | Incubation:CDCA | pH:7
F280Strain:Lachnospiraceae St.61 | Incubation:CDCA | pH:9
F281Strain:Lachnospiraceae St.61 | Incubation:LCA | pH:7
F282Strain:Lachnospiraceae St.61 | Incubation:LCA | pH:9
F283Strain:Lachnospiraceae St.62 | Incubation:3-oxo-delta4-LCA | pH:7
F284Strain:Lachnospiraceae St.62 | Incubation:3-oxo-delta4-LCA | pH:9
F285Strain:Lachnospiraceae St.62 | Incubation:CDCA | pH:7
F286Strain:Lachnospiraceae St.62 | Incubation:CDCA | pH:9
F287Strain:Lachnospiraceae St.62 | Incubation:LCA | pH:7
F288Strain:Lachnospiraceae St.62 | Incubation:LCA | pH:9
F289Strain:Methanobrevibacter smithii St.67 | Incubation:3-oxo-delta4-LCA | pH:7
F290Strain:Methanobrevibacter smithii St.67 | Incubation:3-oxo-delta4-LCA | pH:9
F291Strain:Methanobrevibacter smithii St.67 | Incubation:CDCA | pH:7
F292Strain:Methanobrevibacter smithii St.67 | Incubation:CDCA | pH:9
F293Strain:Methanobrevibacter smithii St.67 | Incubation:LCA | pH:7
F294Strain:Methanobrevibacter smithii St.67 | Incubation:LCA | pH:9
F295Strain:Methanobrevibacter smithii St.68 | Incubation:3-oxo-delta4-LCA | pH:7
F296Strain:Methanobrevibacter smithii St.68 | Incubation:3-oxo-delta4-LCA | pH:9
F297Strain:Methanobrevibacter smithii St.68 | Incubation:CDCA | pH:7
F298Strain:Methanobrevibacter smithii St.68 | Incubation:CDCA | pH:9
F299Strain:Methanobrevibacter smithii St.68 | Incubation:LCA | pH:7
F300Strain:Methanobrevibacter smithii St.68 | Incubation:LCA | pH:9
F301Strain:no-bacteria-190625_WCA | Incubation:3-oxo-delta4-LCA | pH:7
F302Strain:no-bacteria-190625_WCA | Incubation:3-oxo-delta4-LCA | pH:9
F303Strain:no-bacteria-190625_WCA | Incubation:CDCA | pH:7
F304Strain:no-bacteria-190625_WCA | Incubation:CDCA | pH:9
F305Strain:no-bacteria-190625_WCA | Incubation:LCA | pH:7
F306Strain:no-bacteria-190625_WCA | Incubation:LCA | pH:9
F307Strain:no-bacteria-190706_WCA | Incubation:3-oxo-delta4-LCA | pH:7
F308Strain:no-bacteria-190706_WCA | Incubation:3-oxo-delta4-LCA | pH:9
F309Strain:no-bacteria-190706_WCA | Incubation:CDCA | pH:7
F310Strain:no-bacteria-190706_WCA | Incubation:CDCA | pH:9
F311Strain:no-bacteria-190706_WCA | Incubation:LCA | pH:7
F312Strain:no-bacteria-190706_WCA | Incubation:LCA | pH:9
F313Strain:No bacteria_RC | Incubation:3-oxo-delta4-LCA | pH:7
F314Strain:No bacteria_RC | Incubation:3-oxo-delta4-LCA | pH:9
F315Strain:No bacteria_RC | Incubation:CDCA | pH:7
F316Strain:No bacteria_RC | Incubation:CDCA | pH:9
F317Strain:No bacteria_RC | Incubation:LCA | pH:7
F318Strain:No bacteria_RC | Incubation:LCA | pH:9
F319Strain:No bacteria_RC+SA | Incubation:3-oxo-delta4-LCA | pH:7
F320Strain:No bacteria_RC+SA | Incubation:3-oxo-delta4-LCA | pH:9
F321Strain:No bacteria_RC+SA | Incubation:CDCA | pH:7
F322Strain:No bacteria_RC+SA | Incubation:CDCA | pH:9
F323Strain:No bacteria_RC+SA | Incubation:LCA | pH:7
F324Strain:No bacteria_RC+SA | Incubation:LCA | pH:9
F325Strain:No bacteria_WCA+FFT | Incubation:3-oxo-delta4-LCA | pH:7
F326Strain:No bacteria_WCA+FFT | Incubation:3-oxo-delta4-LCA | pH:9
F327Strain:No bacteria_WCA+FFT | Incubation:CDCA | pH:7
F328Strain:No bacteria_WCA+FFT | Incubation:CDCA | pH:9
F329Strain:No bacteria_WCA+FFT | Incubation:LCA | pH:7
F330Strain:No bacteria_WCA+FFT | Incubation:LCA | pH:9
F331Strain:No bacteria_WCA for methano | Incubation:3-oxo-delta4-LCA | pH:7
F332Strain:No bacteria_WCA for methano | Incubation:3-oxo-delta4-LCA | pH:9
F333Strain:No bacteria_WCA for methano | Incubation:CDCA | pH:7
F334Strain:No bacteria_WCA for methano | Incubation:CDCA | pH:9
F335Strain:No bacteria_WCA for methano | Incubation:LCA | pH:7
F336Strain:No bacteria_WCA for methano | Incubation:LCA | pH:9
F337Strain:No bacteria_WCA+VFA | Incubation:3-oxo-delta4-LCA | pH:7
F338Strain:No bacteria_WCA+VFA | Incubation:3-oxo-delta4-LCA | pH:9
F339Strain:No bacteria_WCA+VFA | Incubation:CDCA | pH:7
F340Strain:No bacteria_WCA+VFA | Incubation:CDCA | pH:9
F341Strain:No bacteria_WCA+VFA | Incubation:LCA | pH:7
F342Strain:No bacteria_WCA+VFA | Incubation:LCA | pH:9
F343Strain:Odoribacteraceae St.21 | Incubation:3-oxo-delta4-LCA | pH:7
F344Strain:Odoribacteraceae St.21 | Incubation:3-oxo-delta4-LCA | pH:9
F345Strain:Odoribacteraceae St.21 | Incubation:CDCA | pH:7
F346Strain:Odoribacteraceae St.21 | Incubation:CDCA | pH:9
F347Strain:Odoribacteraceae St.21 | Incubation:LCA | pH:7
F348Strain:Odoribacteraceae St.21 | Incubation:LCA | pH:9
F349Strain:Odoribacteraceae St.22 | Incubation:3-oxo-delta4-LCA | pH:7
F350Strain:Odoribacteraceae St.22 | Incubation:3-oxo-delta4-LCA | pH:9
F351Strain:Odoribacteraceae St.22 | Incubation:CDCA | pH:7
F352Strain:Odoribacteraceae St.22 | Incubation:CDCA | pH:9
F353Strain:Odoribacteraceae St.22 | Incubation:LCA | pH:7
F354Strain:Odoribacteraceae St.22 | Incubation:LCA | pH:9
F355Strain:Odoribacteraceae St.23 | Incubation:3-oxo-delta4-LCA | pH:7
F356Strain:Odoribacteraceae St.23 | Incubation:3-oxo-delta4-LCA | pH:9
F357Strain:Odoribacteraceae St.23 | Incubation:CDCA | pH:7
F358Strain:Odoribacteraceae St.23 | Incubation:CDCA | pH:9
F359Strain:Odoribacteraceae St.23 | Incubation:LCA | pH:7
F360Strain:Odoribacteraceae St.23 | Incubation:LCA | pH:9
F361Strain:Odoribacteraceae St.24 | Incubation:3-oxo-delta4-LCA | pH:7
F362Strain:Odoribacteraceae St.24 | Incubation:3-oxo-delta4-LCA | pH:9
F363Strain:Odoribacteraceae St.24 | Incubation:CDCA | pH:7
F364Strain:Odoribacteraceae St.24 | Incubation:CDCA | pH:9
F365Strain:Odoribacteraceae St.24 | Incubation:LCA | pH:7
F366Strain:Odoribacteraceae St.24 | Incubation:LCA | pH:9
F367Strain:Odoribacter laneus St.19 | Incubation:3-oxo-delta4-LCA | pH:7
F368Strain:Odoribacter laneus St.19 | Incubation:3-oxo-delta4-LCA | pH:9
F369Strain:Odoribacter laneus St.19 | Incubation:CDCA | pH:7
F370Strain:Odoribacter laneus St.19 | Incubation:CDCA | pH:9
F371Strain:Odoribacter laneus St.19 | Incubation:LCA | pH:7
F372Strain:Odoribacter laneus St.19 | Incubation:LCA | pH:9
F373Strain:Odoribacter laneus St.20 | Incubation:3-oxo-delta4-LCA | pH:7
F374Strain:Odoribacter laneus St.20 | Incubation:3-oxo-delta4-LCA | pH:9
F375Strain:Odoribacter laneus St.20 | Incubation:CDCA | pH:7
F376Strain:Odoribacter laneus St.20 | Incubation:CDCA | pH:9
F377Strain:Odoribacter laneus St.20 | Incubation:LCA | pH:7
F378Strain:Odoribacter laneus St.20 | Incubation:LCA | pH:9
F379Strain:Parabacteroides distasonis St.4 | Incubation:3-oxo-delta4-LCA | pH:7
F380Strain:Parabacteroides distasonis St.4 | Incubation:3-oxo-delta4-LCA | pH:9
F381Strain:Parabacteroides distasonis St.4 | Incubation:CDCA | pH:7
F382Strain:Parabacteroides distasonis St.4 | Incubation:CDCA | pH:9
F383Strain:Parabacteroides distasonis St.4 | Incubation:LCA | pH:7
F384Strain:Parabacteroides distasonis St.4 | Incubation:LCA | pH:9
F385Strain:Parabacteroides distasonis St.5 | Incubation:3-oxo-delta4-LCA | pH:7
F386Strain:Parabacteroides distasonis St.5 | Incubation:3-oxo-delta4-LCA | pH:9
F387Strain:Parabacteroides distasonis St.5 | Incubation:CDCA | pH:7
F388Strain:Parabacteroides distasonis St.5 | Incubation:CDCA | pH:9
F389Strain:Parabacteroides distasonis St.5 | Incubation:LCA | pH:7
F390Strain:Parabacteroides distasonis St.5 | Incubation:LCA | pH:9
F391Strain:Parabacteroides goldsteinii St.1 | Incubation:3-oxo-delta4-LCA | pH:7
F392Strain:Parabacteroides goldsteinii St.1 | Incubation:3-oxo-delta4-LCA | pH:9
F393Strain:Parabacteroides goldsteinii St.1 | Incubation:CDCA | pH:7
F394Strain:Parabacteroides goldsteinii St.1 | Incubation:CDCA | pH:9
F395Strain:Parabacteroides goldsteinii St.1 | Incubation:LCA | pH:7
F396Strain:Parabacteroides goldsteinii St.1 | Incubation:LCA | pH:9
F397Strain:Parabacteroides goldsteinii St.2 | Incubation:3-oxo-delta4-LCA | pH:7
F398Strain:Parabacteroides goldsteinii St.2 | Incubation:3-oxo-delta4-LCA | pH:9
F399Strain:Parabacteroides goldsteinii St.2 | Incubation:CDCA | pH:7
F400Strain:Parabacteroides goldsteinii St.2 | Incubation:CDCA | pH:9
F401Strain:Parabacteroides goldsteinii St.2 | Incubation:LCA | pH:7
F402Strain:Parabacteroides goldsteinii St.2 | Incubation:LCA | pH:9
F403Strain:Parabacteroides merdae St.3 | Incubation:3-oxo-delta4-LCA | pH:7
F404Strain:Parabacteroides merdae St.3 | Incubation:3-oxo-delta4-LCA | pH:9
F405Strain:Parabacteroides merdae St.3 | Incubation:CDCA | pH:7
F406Strain:Parabacteroides merdae St.3 | Incubation:CDCA | pH:9
F407Strain:Parabacteroides merdae St.3 | Incubation:LCA | pH:7
F408Strain:Parabacteroides merdae St.3 | Incubation:LCA | pH:9
F409Strain:Phascolarctobacterium faecium St.52 | Incubation:3-oxo-delta4-LCA | pH:7
F410Strain:Phascolarctobacterium faecium St.52 | Incubation:3-oxo-delta4-LCA | pH:9
F411Strain:Phascolarctobacterium faecium St.52 | Incubation:CDCA | pH:7
F412Strain:Phascolarctobacterium faecium St.52 | Incubation:CDCA | pH:9
F413Strain:Phascolarctobacterium faecium St.52 | Incubation:LCA | pH:7
F414Strain:Phascolarctobacterium faecium St.52 | Incubation:LCA | pH:9
F415Strain:Phascolarctobacterium faecium St.53 | Incubation:3-oxo-delta4-LCA | pH:7
F416Strain:Phascolarctobacterium faecium St.53 | Incubation:3-oxo-delta4-LCA | pH:9
F417Strain:Phascolarctobacterium faecium St.53 | Incubation:CDCA | pH:7
F418Strain:Phascolarctobacterium faecium St.53 | Incubation:CDCA | pH:9
F419Strain:Phascolarctobacterium faecium St.53 | Incubation:LCA | pH:7
F420Strain:Phascolarctobacterium faecium St.53 | Incubation:LCA | pH:9
F421Strain:Porphyromonas somerae St.14 | Incubation:3-oxo-delta4-LCA | pH:7
F422Strain:Porphyromonas somerae St.14 | Incubation:3-oxo-delta4-LCA | pH:9
F423Strain:Porphyromonas somerae St.14 | Incubation:CDCA | pH:7
F424Strain:Porphyromonas somerae St.14 | Incubation:CDCA | pH:9
F425Strain:Porphyromonas somerae St.14 | Incubation:LCA | pH:7
F426Strain:Porphyromonas somerae St.14 | Incubation:LCA | pH:9
F427Strain:Pyramidobacter piscolens St.28 | Incubation:3-oxo-delta4-LCA | pH:7
F428Strain:Pyramidobacter piscolens St.28 | Incubation:3-oxo-delta4-LCA | pH:9
F429Strain:Pyramidobacter piscolens St.28 | Incubation:CDCA | pH:7
F430Strain:Pyramidobacter piscolens St.28 | Incubation:CDCA | pH:9
F431Strain:Pyramidobacter piscolens St.28 | Incubation:LCA | pH:7
F432Strain:Pyramidobacter piscolens St.28 | Incubation:LCA | pH:9
F433Strain:Raoultibacter timonensis St.30 | Incubation:3-oxo-delta4-LCA | pH:7
F434Strain:Raoultibacter timonensis St.30 | Incubation:3-oxo-delta4-LCA | pH:9
F435Strain:Raoultibacter timonensis St.30 | Incubation:CDCA | pH:7
F436Strain:Raoultibacter timonensis St.30 | Incubation:CDCA | pH:9
F437Strain:Raoultibacter timonensis St.30 | Incubation:LCA | pH:7
F438Strain:Raoultibacter timonensis St.30 | Incubation:LCA | pH:9
F439Strain:Raoultibacter timonensis St.31 | Incubation:3-oxo-delta4-LCA | pH:7
F440Strain:Raoultibacter timonensis St.31 | Incubation:3-oxo-delta4-LCA | pH:9
F441Strain:Raoultibacter timonensis St.31 | Incubation:CDCA | pH:7
F442Strain:Raoultibacter timonensis St.31 | Incubation:CDCA | pH:9
F443Strain:Raoultibacter timonensis St.31 | Incubation:LCA | pH:7
F444Strain:Raoultibacter timonensis St.31 | Incubation:LCA | pH:9
F445Strain:Ruminococcaceae St.40 | Incubation:3-oxo-delta4-LCA | pH:7
F446Strain:Ruminococcaceae St.40 | Incubation:3-oxo-delta4-LCA | pH:9
F447Strain:Ruminococcaceae St.40 | Incubation:CDCA | pH:7
F448Strain:Ruminococcaceae St.40 | Incubation:CDCA | pH:9
F449Strain:Ruminococcaceae St.40 | Incubation:LCA | pH:7
F450Strain:Ruminococcaceae St.40 | Incubation:LCA | pH:9
F451Strain:Ruminococcaceae St.41 | Incubation:3-oxo-delta4-LCA | pH:7
F452Strain:Ruminococcaceae St.41 | Incubation:3-oxo-delta4-LCA | pH:9
F453Strain:Ruminococcaceae St.41 | Incubation:CDCA | pH:7
F454Strain:Ruminococcaceae St.41 | Incubation:CDCA | pH:9
F455Strain:Ruminococcaceae St.41 | Incubation:LCA | pH:7
F456Strain:Ruminococcaceae St.41 | Incubation:LCA | pH:9
F457Strain:Ruminococcaceae St.42 | Incubation:3-oxo-delta4-LCA | pH:7
F458Strain:Ruminococcaceae St.42 | Incubation:3-oxo-delta4-LCA | pH:9
F459Strain:Ruminococcaceae St.42 | Incubation:CDCA | pH:7
F460Strain:Ruminococcaceae St.42 | Incubation:CDCA | pH:9
F461Strain:Ruminococcaceae St.42 | Incubation:LCA | pH:7
F462Strain:Ruminococcaceae St.42 | Incubation:LCA | pH:9
F463Strain:Ruminococcaceae St.43 | Incubation:3-oxo-delta4-LCA | pH:7
F464Strain:Ruminococcaceae St.43 | Incubation:3-oxo-delta4-LCA | pH:9
F465Strain:Ruminococcaceae St.43 | Incubation:CDCA | pH:7
F466Strain:Ruminococcaceae St.43 | Incubation:CDCA | pH:9
F467Strain:Ruminococcaceae St.43 | Incubation:LCA | pH:7
F468Strain:Ruminococcaceae St.43 | Incubation:LCA | pH:9
F469Strain:Ruminococcaceae St.44 | Incubation:3-oxo-delta4-LCA | pH:7
F470Strain:Ruminococcaceae St.44 | Incubation:3-oxo-delta4-LCA | pH:9
F471Strain:Ruminococcaceae St.44 | Incubation:CDCA | pH:7
F472Strain:Ruminococcaceae St.44 | Incubation:CDCA | pH:9
F473Strain:Ruminococcaceae St.44 | Incubation:LCA | pH:7
F474Strain:Ruminococcaceae St.44 | Incubation:LCA | pH:9
F475Strain:Ruminococcaceae St.45 | Incubation:3-oxo-delta4-LCA | pH:7
F476Strain:Ruminococcaceae St.45 | Incubation:3-oxo-delta4-LCA | pH:9
F477Strain:Ruminococcaceae St.45 | Incubation:CDCA | pH:7
F478Strain:Ruminococcaceae St.45 | Incubation:CDCA | pH:9
F479Strain:Ruminococcaceae St.45 | Incubation:LCA | pH:7
F480Strain:Ruminococcaceae St.45 | Incubation:LCA | pH:9
F481Strain:STD1_0.00000596046uM
F482Strain:STD1_0.0000119209uM
F483Strain:STD1_0.0000238419uM
F484Strain:STD1_0.0000476837uM
F485Strain:STD1_0.0000953674uM
F486Strain:STD1_0.000190735uM
F487Strain:STD1_0.00038147uM
F488Strain:STD1_0.000762939uM
F489Strain:STD1_0.001525879uM
F490Strain:STD1_0.003051758uM
F491Strain:STD1_0.006103516uM
F492Strain:STD1_0.012207031uM
F493Strain:STD1_0.024414063uM
F494Strain:STD1_0.048828125uM
F495Strain:STD1_0.09765625uM
F496Strain:STD1_0.1953125uM
F497Strain:STD1_0.390625uM
F498Strain:STD1_0.78125uM
F499Strain:STD1_12.5uM
F500Strain:STD1_1.5625uM
F501Strain:STD1_25uM
F502Strain:STD1_3.125uM
F503Strain:STD1_50uM
F504Strain:STD1_6.25uM
F505Strain:STD2_0.00038147uM
F506Strain:STD2_0.000762939uM
F507Strain:STD2_0.001525879uM
F508Strain:STD2_0.003051758uM
F509Strain:STD2_0.006103516uM
F510Strain:STD2_0.012207031uM
F511Strain:STD2_0.024414063uM
F512Strain:STD2_0.048828125uM
F513Strain:STD2_0.09765625uM
F514Strain:STD2_0.1953125uM
F515Strain:STD2_0.390625uM
F516Strain:STD2_0.78125uM
F517Strain:STD2_12.5uM
F518Strain:STD2_1.5625uM
F519Strain:STD2_25uM
F520Strain:STD2_3.125uM
F521Strain:STD2_50uM
F522Strain:STD2_6.25uM
Data matrix
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