Clustering data with heatmap algorithm for (Study ST002281)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Genotype:blank | Treatment:negative mode-blank
F2Genotype:blank | Treatment:positive mode-blank
F3Genotype:isogenic normal hiPSCs (N1) | Treatment:negative mode-normal
F4Genotype:isogenic normal hiPSCs (N1) | Treatment:positive mode-normal
F5Genotype:isogenic normal hiPSCs (N2) | Treatment:negative mode-normal
F6Genotype:isogenic normal hiPSCs (N2) | Treatment:positive mode-normal
F7Genotype:isogenic normal hiPSCs (N3) | Treatment:negative mode-normal
F8Genotype:isogenic normal hiPSCs (N3) | Treatment:positive mode-normal
F9Genotype:quality control 1 (QC1) | Treatment:negative mode-quality control 1 (QC1)
F10Genotype:quality control 1 (QC1) | Treatment:positive mode-quality control 1 (QC1)
F11Genotype:quality control 2 (QC2) | Treatment:negative mode-quality control 2 (QC2)
F12Genotype:quality control 2 (QC2) | Treatment:positive mode-quality control 2 (QC2)
F13Genotype:quality control 3 (QC3) | Treatment:negative mode-quality control 3 (QC3)
F14Genotype:quality control 3 (QC3) | Treatment:positive mode-quality control 3 (QC3)
F15Genotype:Trisomy 21 hiPSCs (P1) | Treatment:negative mode-Trisomy 21
F16Genotype:Trisomy 21 hiPSCs (P1) | Treatment:positive mode-Trisomy 21
F17Genotype:Trisomy 21 hiPSCs (P2) | Treatment:negative mode-Trisomy 21
F18Genotype:Trisomy 21 hiPSCs (P2) | Treatment:positive mode-Trisomy 21
F19Genotype:Trisomy 21 hiPSCs (P3) | Treatment:negative mode-Trisomy 21
F20Genotype:Trisomy 21 hiPSCs (P3) | Treatment:positive mode-Trisomy 21
Data matrix
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