Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for (Study ST002509)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Strain:2243 \| AcetateConcentration_mM:0 \| Time:16.5
F2	Strain:2243 \| AcetateConcentration_mM:0 \| Time:21.5
F3	Strain:2243 \| AcetateConcentration_mM:0 \| Time:26
F4	Strain:2243 \| AcetateConcentration_mM:0 \| Time:30
F5	Strain:2243 \| AcetateConcentration_mM:0 \| Time:42
F6	Strain:2243 \| AcetateConcentration_mM:0 \| Time:50
F7	Strain:2243 \| AcetateConcentration_mM:10Add \| Time:16.5
F8	Strain:2243 \| AcetateConcentration_mM:10Add \| Time:21.5
F9	Strain:2243 \| AcetateConcentration_mM:10Add \| Time:26
F10	Strain:2243 \| AcetateConcentration_mM:10Add \| Time:30
F11	Strain:2243 \| AcetateConcentration_mM:10Add \| Time:42
F12	Strain:2243 \| AcetateConcentration_mM:10Add \| Time:50
F13	Strain:2243 \| AcetateConcentration_mM:10 \| Time:16.5
F14	Strain:2243 \| AcetateConcentration_mM:10 \| Time:21.5
F15	Strain:2243 \| AcetateConcentration_mM:10 \| Time:26
F16	Strain:2243 \| AcetateConcentration_mM:10 \| Time:30
F17	Strain:2243 \| AcetateConcentration_mM:10 \| Time:42
F18	Strain:2243 \| AcetateConcentration_mM:10 \| Time:50
F19	Strain:2243 \| AcetateConcentration_mM:1 \| Time:16.5
F20	Strain:2243 \| AcetateConcentration_mM:1 \| Time:21.5
F21	Strain:2243 \| AcetateConcentration_mM:1 \| Time:26
F22	Strain:2243 \| AcetateConcentration_mM:1 \| Time:30
F23	Strain:2243 \| AcetateConcentration_mM:1 \| Time:42
F24	Strain:2243 \| AcetateConcentration_mM:1 \| Time:50
F25	Strain:AB8 \| AcetateConcentration_mM:0 \| Time:16.5
F26	Strain:AB8 \| AcetateConcentration_mM:0 \| Time:21.5
F27	Strain:AB8 \| AcetateConcentration_mM:0 \| Time:26
F28	Strain:AB8 \| AcetateConcentration_mM:0 \| Time:30
F29	Strain:AB8 \| AcetateConcentration_mM:0 \| Time:42
F30	Strain:AB8 \| AcetateConcentration_mM:0 \| Time:50
F31	Strain:AB8 \| AcetateConcentration_mM:10 \| Time:16.5
F32	Strain:AB8 \| AcetateConcentration_mM:10 \| Time:21.5
F33	Strain:AB8 \| AcetateConcentration_mM:10 \| Time:26
F34	Strain:AB8 \| AcetateConcentration_mM:10 \| Time:30
F35	Strain:AB8 \| AcetateConcentration_mM:10 \| Time:42
F36	Strain:AB8 \| AcetateConcentration_mM:10 \| Time:50
F37	Strain:AB8 \| AcetateConcentration_mM:1 \| Time:16.5
F38	Strain:AB8 \| AcetateConcentration_mM:1 \| Time:21.5
F39	Strain:AB8 \| AcetateConcentration_mM:1 \| Time:26
F40	Strain:AB8 \| AcetateConcentration_mM:1 \| Time:30
F41	Strain:AB8 \| AcetateConcentration_mM:1 \| Time:42
F42	Strain:AB8 \| AcetateConcentration_mM:1 \| Time:50
F43	Strain:- \| AcetateConcentration_mM:- \| Time:-
F44	Strain:Ctrl \| AcetateConcentration_mM:0 \| Time:16.5
F45	Strain:Ctrl \| AcetateConcentration_mM:0 \| Time:21.5
F46	Strain:Ctrl \| AcetateConcentration_mM:0 \| Time:26
F47	Strain:Ctrl \| AcetateConcentration_mM:0 \| Time:30
F48	Strain:Ctrl \| AcetateConcentration_mM:0 \| Time:42
F49	Strain:Ctrl \| AcetateConcentration_mM:0 \| Time:50
F50	Strain:Ctrl \| AcetateConcentration_mM:10Add \| Time:16.5
F51	Strain:Ctrl \| AcetateConcentration_mM:10Add \| Time:21.5
F52	Strain:Ctrl \| AcetateConcentration_mM:10Add \| Time:26
F53	Strain:Ctrl \| AcetateConcentration_mM:10Add \| Time:30
F54	Strain:Ctrl \| AcetateConcentration_mM:10Add \| Time:42
F55	Strain:Ctrl \| AcetateConcentration_mM:10Add \| Time:50
F56	Strain:Ctrl \| AcetateConcentration_mM:10 \| Time:16.5
F57	Strain:Ctrl \| AcetateConcentration_mM:10 \| Time:21.5
F58	Strain:Ctrl \| AcetateConcentration_mM:10 \| Time:26
F59	Strain:Ctrl \| AcetateConcentration_mM:10 \| Time:30
F60	Strain:Ctrl \| AcetateConcentration_mM:10 \| Time:42
F61	Strain:Ctrl \| AcetateConcentration_mM:10 \| Time:50
F62	Strain:Ctrl \| AcetateConcentration_mM:1 \| Time:16.5
F63	Strain:Ctrl \| AcetateConcentration_mM:1 \| Time:21.5
F64	Strain:Ctrl \| AcetateConcentration_mM:1 \| Time:26
F65	Strain:Ctrl \| AcetateConcentration_mM:1 \| Time:30
F66	Strain:Ctrl \| AcetateConcentration_mM:1 \| Time:42
F67	Strain:Ctrl \| AcetateConcentration_mM:1 \| Time:50
F68	Strain:Val \| AcetateConcentration_mM:0 \| Time:16.5
F69	Strain:Val \| AcetateConcentration_mM:0 \| Time:21.5
F70	Strain:Val \| AcetateConcentration_mM:0 \| Time:26
F71	Strain:Val \| AcetateConcentration_mM:0 \| Time:30
F72	Strain:Val \| AcetateConcentration_mM:0 \| Time:42
F73	Strain:Val \| AcetateConcentration_mM:0 \| Time:50
F74	Strain:Val \| AcetateConcentration_mM:10 \| Time:16.5
F75	Strain:Val \| AcetateConcentration_mM:10 \| Time:21.5
F76	Strain:Val \| AcetateConcentration_mM:10 \| Time:26
F77	Strain:Val \| AcetateConcentration_mM:10 \| Time:30
F78	Strain:Val \| AcetateConcentration_mM:10 \| Time:42
F79	Strain:Val \| AcetateConcentration_mM:10 \| Time:50
F80	Strain:Val \| AcetateConcentration_mM:1 \| Time:16.5
F81	Strain:Val \| AcetateConcentration_mM:1 \| Time:21.5
F82	Strain:Val \| AcetateConcentration_mM:1 \| Time:26
F83	Strain:Val \| AcetateConcentration_mM:1 \| Time:30
F84	Strain:Val \| AcetateConcentration_mM:1 \| Time:42
F85	Strain:Val \| AcetateConcentration_mM:1 \| Time:50

Data matrix