Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for (Study ST002632)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041991-90245013105-N.zip
F2	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041992-90248013105-N.zip
F3	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041994-90252013105-N.zip
F4	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041998-90265013105-N.zip
F5	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041999-90266013105-N.zip
F6	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041981-90217013105-N.zip
F7	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041987-90229013105-N.zip
F8	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041988-90232013105-N.zip
F9	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041989-90237013105-N.zip
F10	Group:Control \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041990-90239013105-N.zip
F11	Group:QC-Blank \| Timepoint:0 hour \| Sex:- \| Tissue:-
F12	Group:QC-DriftCorrection \| Timepoint:0 hour \| Sex:- \| Tissue:-
F13	Group:QC-Pooled \| Timepoint:0 hour \| Sex:- \| Tissue:-
F14	Group:QC-ReCAS \| Timepoint:0 hour \| Sex:- \| Tissue:-
F15	Group:QC-Reference \| Timepoint:0 hour \| Sex:- \| Tissue:-
F16	Group:Training \| Timepoint:1 week of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042021-90559013105-N.zip
F17	Group:Training \| Timepoint:1 week of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042022-90560013105-N.zip
F18	Group:Training \| Timepoint:1 week of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042023-90564013105-N.zip
F19	Group:Training \| Timepoint:1 week of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042024-90567013105-N.zip
F20	Group:Training \| Timepoint:1 week of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042025-90571013105-N.zip
F21	Group:Training \| Timepoint:1 week of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042011-90421013105-N.zip
F22	Group:Training \| Timepoint:1 week of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042012-90422013105-N.zip
F23	Group:Training \| Timepoint:1 week of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042013-90423013105-N.zip
F24	Group:Training \| Timepoint:1 week of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042014-90426013105-N.zip
F25	Group:Training \| Timepoint:1 week of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042015-90430013105-N.zip
F26	Group:Training \| Timepoint:2 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042026-90576013105-N.zip
F27	Group:Training \| Timepoint:2 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042027-90578013105-N.zip
F28	Group:Training \| Timepoint:2 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042028-90581013105-N.zip
F29	Group:Training \| Timepoint:2 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042029-90585013105-N.zip
F30	Group:Training \| Timepoint:2 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042030-90587013105-N.zip
F31	Group:Training \| Timepoint:2 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042016-90439013105-N.zip
F32	Group:Training \| Timepoint:2 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042017-90441013105-N.zip
F33	Group:Training \| Timepoint:2 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042018-90444013105-N.zip
F34	Group:Training \| Timepoint:2 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042019-90449013105-N.zip
F35	Group:Training \| Timepoint:2 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042020-90450013105-N.zip
F36	Group:Training \| Timepoint:4 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042006-90406013105-N.zip
F37	Group:Training \| Timepoint:4 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042007-90410013105-N.zip
F38	Group:Training \| Timepoint:4 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042008-90412013105-N.zip
F39	Group:Training \| Timepoint:4 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042009-90416013105-N.zip
F40	Group:Training \| Timepoint:4 weeks of training \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042010-90420013105-N.zip
F41	Group:Training \| Timepoint:4 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042001-90280013105-N.zip
F42	Group:Training \| Timepoint:4 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042002-90281013105-N.zip
F43	Group:Training \| Timepoint:4 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042003-90283013105-N.zip
F44	Group:Training \| Timepoint:4 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042004-90289013105-N.zip
F45	Group:Training \| Timepoint:4 weeks of training \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042005-90292013105-N.zip
F46	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041993-90251013105-N.zip
F47	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041995-90254013105-N.zip
F48	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041996-90258013105-N.zip
F49	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041997-90259013105-N.zip
F50	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Female \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00042000-90267013105-N.zip
F51	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041982-90218013105-N.zip
F52	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041983-90222013105-N.zip
F53	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041984-90223013105-N.zip
F54	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041985-90225013105-N.zip
F55	Group:Training \| Timepoint:8 weeks of training or control time \| Sex:Male \| Tissue:raw_file=20191122-EX00979-A003-IN0028-S00041986-90227013105-N.zip

Data matrix