Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for (Study ST002829)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Sex:Female \| Severity_Scale:0 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F2	Sex:Female \| Severity_Scale:0 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F3	Sex:Female \| Severity_Scale:0 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F4	Sex:Female \| Severity_Scale:0 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F5	Sex:Female \| Severity_Scale:0 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F6	Sex:Female \| Severity_Scale:0 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F7	Sex:Female \| Severity_Scale:0 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F8	Sex:Female \| Severity_Scale:0 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F9	Sex:Female \| Severity_Scale:0 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F10	Sex:Female \| Severity_Scale:0 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F11	Sex:Female \| Severity_Scale:0 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F12	Sex:Female \| Severity_Scale:0 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F13	Sex:Female \| Severity_Scale:0 \| Race:White \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F14	Sex:Female \| Severity_Scale:0 \| Race:White \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F15	Sex:Female \| Severity_Scale:0 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F16	Sex:Female \| Severity_Scale:0 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F17	Sex:Female \| Severity_Scale:0 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F18	Sex:Female \| Severity_Scale:0 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F19	Sex:Female \| Severity_Scale:1 \| Race:Black \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F20	Sex:Female \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F21	Sex:Female \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F22	Sex:Female \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F23	Sex:Female \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F24	Sex:Female \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F25	Sex:Female \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F26	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F27	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F28	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F29	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F30	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F31	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F32	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F33	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F34	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F35	Sex:Female \| Severity_Scale:1 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F36	Sex:Female \| Severity_Scale:1 \| Race:White \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F37	Sex:Female \| Severity_Scale:1 \| Race:White \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F38	Sex:Female \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F39	Sex:Female \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F40	Sex:Female \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F41	Sex:Female \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F42	Sex:Female \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F43	Sex:Female \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F44	Sex:Female \| Severity_Scale:2 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F45	Sex:Female \| Severity_Scale:2 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F46	Sex:Female \| Severity_Scale:2 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F47	Sex:Female \| Severity_Scale:2 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F48	Sex:Female \| Severity_Scale:2 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F49	Sex:Female \| Severity_Scale:2 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F50	Sex:Female \| Severity_Scale:2 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F51	Sex:Female \| Severity_Scale:2 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F52	Sex:Female \| Severity_Scale:2 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F53	Sex:Female \| Severity_Scale:2 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F54	Sex:Female \| Severity_Scale:2 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F55	Sex:Female \| Severity_Scale:2 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F56	Sex:Female \| Severity_Scale:2 \| Race:White \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F57	Sex:Female \| Severity_Scale:2 \| Race:White \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F58	Sex:Female \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F59	Sex:Female \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F60	Sex:Female \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F61	Sex:Female \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F62	Sex:Female \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F63	Sex:Female \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F64	Sex:Female \| Severity_Scale:3 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F65	Sex:Female \| Severity_Scale:3 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F66	Sex:Female \| Severity_Scale:3 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F67	Sex:Female \| Severity_Scale:3 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F68	Sex:Female \| Severity_Scale:3 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F69	Sex:Female \| Severity_Scale:3 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F70	Sex:Female \| Severity_Scale:3 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F71	Sex:Female \| Severity_Scale:3 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F72	Sex:Female \| Severity_Scale:3 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F73	Sex:Female \| Severity_Scale:3 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F74	Sex:Female \| Severity_Scale:3 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F75	Sex:Male \| Severity_Scale:0 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F76	Sex:Male \| Severity_Scale:0 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F77	Sex:Male \| Severity_Scale:0 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F78	Sex:Male \| Severity_Scale:0 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F79	Sex:Male \| Severity_Scale:0 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F80	Sex:Male \| Severity_Scale:0 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F81	Sex:Male \| Severity_Scale:0 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F82	Sex:Male \| Severity_Scale:0 \| Race:White \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F83	Sex:Male \| Severity_Scale:0 \| Race:White \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F84	Sex:Male \| Severity_Scale:0 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F85	Sex:Male \| Severity_Scale:0 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F86	Sex:Male \| Severity_Scale:0 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F87	Sex:Male \| Severity_Scale:0 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F88	Sex:Male \| Severity_Scale:0 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F89	Sex:Male \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F90	Sex:Male \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F91	Sex:Male \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F92	Sex:Male \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F93	Sex:Male \| Severity_Scale:1 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F94	Sex:Male \| Severity_Scale:1 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F95	Sex:Male \| Severity_Scale:1 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F96	Sex:Male \| Severity_Scale:1 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F97	Sex:Male \| Severity_Scale:1 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F98	Sex:Male \| Severity_Scale:1 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F99	Sex:Male \| Severity_Scale:1 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F100	Sex:Male \| Severity_Scale:1 \| Race:White \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F101	Sex:Male \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F102	Sex:Male \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F103	Sex:Male \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F104	Sex:Male \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F105	Sex:Male \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F106	Sex:Male \| Severity_Scale:1 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F107	Sex:Male \| Severity_Scale:2 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F108	Sex:Male \| Severity_Scale:2 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F109	Sex:Male \| Severity_Scale:2 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F110	Sex:Male \| Severity_Scale:2 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F111	Sex:Male \| Severity_Scale:2 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F112	Sex:Male \| Severity_Scale:2 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F113	Sex:Male \| Severity_Scale:2 \| Race:Other \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F114	Sex:Male \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F115	Sex:Male \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F116	Sex:Male \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F117	Sex:Male \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F118	Sex:Male \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F119	Sex:Male \| Severity_Scale:2 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F120	Sex:Male \| Severity_Scale:3 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:during COVID-19
F121	Sex:Male \| Severity_Scale:3 \| Race:Black \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F122	Sex:Male \| Severity_Scale:3 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F123	Sex:Male \| Severity_Scale:3 \| Race:Other \| Ethnicity:Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19
F124	Sex:Male \| Severity_Scale:3 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:post-COVID-19
F125	Sex:Male \| Severity_Scale:3 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:0 \| Time:pre-COVID-19
F126	Sex:Male \| Severity_Scale:3 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:during COVID-19
F127	Sex:Male \| Severity_Scale:3 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:post-COVID-19
F128	Sex:Male \| Severity_Scale:3 \| Race:White \| Ethnicity:Non-Hispanic \| hasSmokingBeforeCOVID-19:1 \| Time:pre-COVID-19

Data matrix