Clustering data with heatmap algorithm for (Study ST003261)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Sample source:Breast cancer cells | Treatment:10 µM Comp. 1 | time point:2 h
F2Sample source:Breast cancer cells | Treatment:10 µM Comp. 2 | time point:2 h
F3Sample source:Breast cancer cells | Treatment:10 µM Comp. 3 | time point:2 h
F4Sample source:Breast cancer cells | Treatment:10 µM RSL3 | time point:24 h
F5Sample source:Breast cancer cells | Treatment:10 µM RSL3 | time point:2 h
F6Sample source:Breast cancer cells | Treatment:10 µM RSL3 | time point:4 h
F7Sample source:Breast cancer cells | Treatment:10 µM RSL3 | time point:6 h
F8Sample source:Breast cancer cells | Treatment:1 µM Comp. 1 | time point:2 h
F9Sample source:Breast cancer cells | Treatment:1 µM Comp. 2 | time point:2 h
F10Sample source:Breast cancer cells | Treatment:1 µM Comp. 3 | time point:2 h
F11Sample source:Breast cancer cells | Treatment:1 µM RSL3 + 3 µM Ferrostatin | time point:2 h
F12Sample source:Breast cancer cells | Treatment:1 µM RSL3 | time point:24 h
F13Sample source:Breast cancer cells | Treatment:1 µM RSL3 | time point:2 h
F14Sample source:Breast cancer cells | Treatment:1 µM RSL3 | time point:4 h
F15Sample source:Breast cancer cells | Treatment:1 µM RSL3 | time point:6 h
F16Sample source:Breast cancer cells | Treatment:3 µM Comp. 1 | time point:2 h
F17Sample source:Breast cancer cells | Treatment:3 µM Comp. 2 | time point:2 h
F18Sample source:Breast cancer cells | Treatment:3 µM Comp. 3 | time point:2 h
F19Sample source:Breast cancer cells | Treatment:DMSO | time point:24 h
F20Sample source:Breast cancer cells | Treatment:DMSO | time point:2 h
F21Sample source:Breast cancer cells | Treatment:DMSO | time point:4 h
F22Sample source:Breast cancer cells | Treatment:DMSO | time point:6 h
Data matrix
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