Clustering data with heatmap algorithm for (Study ST003424)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Genotype:CLN8 KO | Sample source:HeLa | Transfection:CLN8-HA | Replicate:1
F2Genotype:CLN8 KO | Sample source:HeLa | Transfection:CLN8-HA | Replicate:2
F3Genotype:CLN8 KO | Sample source:HeLa | Transfection:CLN8-HA | Replicate:3
F4Genotype:CLN8 KO | Sample source:HeLa | Transfection:Empty vector | Replicate:1
F5Genotype:CLN8 KO | Sample source:HeLa | Transfection:Empty vector | Replicate:2
F6Genotype:CLN8 KO | Sample source:HeLa | Transfection:Empty vector | Replicate:3
F7Genotype:CLN8 KO | Sample source:HeLa | Transfection:None | Replicate:1
F8Genotype:CLN8 KO | Sample source:HeLa | Transfection:None | Replicate:2
F9Genotype:CLN8 KO | Sample source:HeLa | Transfection:None | Replicate:3
F10Genotype:CLN8 KO | Sample source:U2OS | Transfection:CLN8-HA | Replicate:1
F11Genotype:CLN8 KO | Sample source:U2OS | Transfection:CLN8-HA | Replicate:2
F12Genotype:CLN8 KO | Sample source:U2OS | Transfection:CLN8-HA | Replicate:3
F13Genotype:CLN8 KO | Sample source:U2OS | Transfection:Empty vector | Replicate:1
F14Genotype:CLN8 KO | Sample source:U2OS | Transfection:Empty vector | Replicate:2
F15Genotype:CLN8 KO | Sample source:U2OS | Transfection:Empty vector | Replicate:3
F16Genotype:CLN8 KO | Sample source:U2OS | Transfection:None | Replicate:1
F17Genotype:CLN8 KO | Sample source:U2OS | Transfection:None | Replicate:2
F18Genotype:CLN8 KO | Sample source:U2OS | Transfection:None | Replicate:3
F19Genotype:Process blank | Sample source:Process blank | Transfection:Process blank | Replicate:Process blank
F20Genotype:Wild-type | Sample source:HeLa | Transfection:None | Replicate:1
F21Genotype:Wild-type | Sample source:HeLa | Transfection:None | Replicate:2
F22Genotype:Wild-type | Sample source:HeLa | Transfection:None | Replicate:3
F23Genotype:Wild-type | Sample source:U2OS | Transfection:None | Replicate:1
F24Genotype:Wild-type | Sample source:U2OS | Transfection:None | Replicate:2
F25Genotype:Wild-type | Sample source:U2OS | Transfection:None | Replicate:3
Data matrix
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