Clustering data with heatmap algorithm for (Study ST003435)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Sample source:NA | Sample Type:Blank | Drug Treatment:NA
F2Sample source:NA | Sample Type:QC | Drug Treatment:NA
F3Sample source:Zebrafish medium | Sample Type:Zebrafish medium | Drug Treatment:1 nM rotenone
F4Sample source:Zebrafish medium | Sample Type:Zebrafish medium | Drug Treatment:20 uM Fasnall
F5Sample source:Zebrafish medium | Sample Type:Zebrafish medium | Drug Treatment:40 uM Fasnall
F6Sample source:Zebrafish medium | Sample Type:Zebrafish medium | Drug Treatment:40 uM GSK2194069
F7Sample source:Zebrafish medium | Sample Type:Zebrafish medium | Drug Treatment:40 uM TVB-2640
F8Sample source:Zebrafish medium | Sample Type:Zebrafish medium | Drug Treatment:5 nM rotenone
F9Sample source:Zebrafish medium | Sample Type:Zebrafish medium | Drug Treatment:Vehicle
F10Sample source:Zebrafish | Sample Type:Zebrafish embryo metabolite extract | Drug Treatment:1 nM rotenone
F11Sample source:Zebrafish | Sample Type:Zebrafish embryo metabolite extract | Drug Treatment:20 uM Fasnall
F12Sample source:Zebrafish | Sample Type:Zebrafish embryo metabolite extract | Drug Treatment:40 uM Fasnall
F13Sample source:Zebrafish | Sample Type:Zebrafish embryo metabolite extract | Drug Treatment:40 uM GSK2194069
F14Sample source:Zebrafish | Sample Type:Zebrafish embryo metabolite extract | Drug Treatment:40 uM TVB-2640
F15Sample source:Zebrafish | Sample Type:Zebrafish embryo metabolite extract | Drug Treatment:5 nM rotenone
F16Sample source:Zebrafish | Sample Type:Zebrafish embryo metabolite extract | Drug Treatment:Vehicle
Data matrix
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