Clustering data with heatmap algorithm for (Study ST003604)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1time (h):0 | Dead E coli treatment:no | inhibitor:none | | genotype:RagA GTP mutant
F2time (h):0 | Dead E coli treatment:no | inhibitor:none | | genotype:WT
F3time (h):18 | Dead E coli treatment:yes | inhibitor:150 nM concanamycin A | | genotype:WT
F4time (h):18 | Dead E coli treatment:yes | inhibitor:50 nM bafilomycin A1 | | genotype:WT
F5time (h):18 | Dead E coli treatment:yes | inhibitor:none | | genotype:RagA GTP mutant
F6time (h):18 | Dead E coli treatment:yes | inhibitor:none | | genotype:WT
F7time (h):6 | Dead E coli treatment:yes | inhibitor:150 nM concanamycin A | | genotype:WT
F8time (h):6 | Dead E coli treatment:yes | inhibitor:50 nM bafilomycin A1 | | genotype:WT
F9time (h):6 | Dead E coli treatment:yes | inhibitor:none | | genotype:RagA GTP mutant
F10time (h):6 | Dead E coli treatment:yes | inhibitor:none | | genotype:WT
Data matrix
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