Clustering data with heatmap algorithm for (Study ST003629)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Variant/Subject:PSMC5 AM (Pittsburgh) | alteration in PSMC5 protein:R201W | comment:Patient
F2Variant/Subject:PSMC5 BC (Pittsburgh) | alteration in PSMC5 protein:None | comment:Control/mother of AM
F3Variant/Subject:PSMC5 BLG (Montpellier) | alteration in PSMC5 protein:R325W | comment:Patient
F4Variant/Subject:PSMC5 BN (Angers) | alteration in PSMC5 protein:E205V | comment:Patient
F5Variant/Subject:PSMC5 Bro (Prague) | alteration in PSMC5 protein:None | comment:Control/Brother of DelExon4
F6Variant/Subject:PSMC5 Bro (Prague) | alteration in PSMC5 protein:None | comment:Control/Brother of DelExon5
F7Variant/Subject:PSMC5 Bro (Prague) | alteration in PSMC5 protein:None | comment:Control/Brother of DelExon6
F8Variant/Subject:PSMC5 Bro (Prague) | alteration in PSMC5 protein:None | comment:Control/Brother of DelExon7
F9Variant/Subject:PSMC5 DelExon4 (Prague) | alteration in PSMC5 protein:Delta Exon 4 | comment:Patient
F10Variant/Subject:PSMC5 FN (Angers) | alteration in PSMC5 protein:None | comment:Control/father of BN
F11Variant/Subject:PSMC5 JFL (Nantes) | alteration in PSMC5 protein:PSMD11 R90* | comment:Control/father of LL
F12Variant/Subject:PSMC5 JLG (Montpellier) | alteration in PSMC5 protein:None | comment:Control/father of BLG
F13Variant/Subject:PSMC5 JS (New-York) | alteration in PSMC5 protein:P320R | comment:Patient
F14Variant/Subject:PSMC5 LL (Nantes) | alteration in PSMC5 protein:PSMD11R90*/Q221R | comment:Patient
Data matrix
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