Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for (Study ST003937)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Sample type:BioPlatelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:3 \| Sample source:Platelets
F2	Sample type:BioPlatelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:48 \| Sample source:Platelets
F3	Sample type:BioPlatelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:6 \| Sample source:Platelets
F4	Sample type:BioPlatelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:Bag \| Sample source:Platelets
F5	Sample type:BioPlatelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:3 \| Sample source:Platelets
F6	Sample type:BioPlatelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:48 \| Sample source:Platelets
F7	Sample type:BioPlatelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:6 \| Sample source:Platelets
F8	Sample type:BioPlatelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:Bag \| Sample source:Platelets
F9	Sample type:BioPlatelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:3 \| Sample source:Platelets
F10	Sample type:BioPlatelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:48 \| Sample source:Platelets
F11	Sample type:BioPlatelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:6 \| Sample source:Platelets
F12	Sample type:BioPlatelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:Bag \| Sample source:Platelets
F13	Sample type:BioPlatelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:3 \| Sample source:Platelets
F14	Sample type:BioPlatelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:48 \| Sample source:Platelets
F15	Sample type:BioPlatelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:6 \| Sample source:Platelets
F16	Sample type:BioPlatelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:Bag \| Sample source:Platelets
F17	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:0 \| Sample source:Platelets
F18	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:2 \| Sample source:Platelets
F19	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:3 \| Sample source:Platelets
F20	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:48 \| Sample source:Platelets
F21	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:6 \| Sample source:Platelets
F22	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:LPS \| Timepoint:Bag \| Sample source:Platelets
F23	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:0 \| Sample source:Platelets
F24	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:2 \| Sample source:Platelets
F25	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:3 \| Sample source:Platelets
F26	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:48 \| Sample source:Platelets
F27	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:6 \| Sample source:Platelets
F28	Sample type:Platelets \| Fresh v stored:Fresh \| Treatment:no LPS \| Timepoint:Bag \| Sample source:Platelets
F29	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:0 \| Sample source:Platelets
F30	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:2 \| Sample source:Platelets
F31	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:3 \| Sample source:Platelets
F32	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:48 \| Sample source:Platelets
F33	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:6 \| Sample source:Platelets
F34	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:LPS \| Timepoint:Bag \| Sample source:Platelets
F35	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:0 \| Sample source:Platelets
F36	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:2 \| Sample source:Platelets
F37	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:3 \| Sample source:Platelets
F38	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:48 \| Sample source:Platelets
F39	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:6 \| Sample source:Platelets
F40	Sample type:Platelets \| Fresh v stored:Stored \| Treatment:no LPS \| Timepoint:Bag \| Sample source:Platelets

Data matrix