Clustering data with heatmap algorithm for (Study ST003936)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Subtype:Basal like | Stage:III | Sample source:Plasma
F2	Subtype:Basal like | Stage:II | Sample source:Plasma
F3	Subtype:Basal like | Stage:NA | Sample source:Plasma
F4	Subtype:Control | Stage:Control | Sample source:Plasma
F5	Subtype:HER2 | Stage:III | Sample source:Plasma
F6	Subtype:HER2 | Stage:II | Sample source:Plasma
F7	Subtype:HER2 | Stage:I | Sample source:Plasma
F8	Subtype:HER2 | Stage:IV | Sample source:Plasma
F9	Subtype:HER2 | Stage:NA | Sample source:Plasma
F10	Subtype:Luminal A | Stage:III | Sample source:Plasma
F11	Subtype:Luminal A | Stage:II | Sample source:Plasma
F12	Subtype:Luminal A | Stage:I | Sample source:Plasma
F13	Subtype:Luminal A | Stage:NA | Sample source:Plasma
F14	Subtype:Luminal B | Stage:III | Sample source:Plasma
F15	Subtype:Luminal B | Stage:II | Sample source:Plasma
F16	Subtype:Luminal B | Stage:I | Sample source:Plasma
F17	Subtype:Luminal B | Stage:IV | Sample source:Plasma
F18	Subtype:Luminal B | Stage:NA | Sample source:Plasma

Data matrix