Clustering data with heatmap algorithm for (Study ST004058)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Genotype:ATP13A2 KO | Treatment:22 6 PG | Sample source:HAP1 | Sample Type:whole cell lysate
F2Genotype:ATP13A2 KO | Treatment:DOPC | Sample source:HAP1 | Sample Type:whole cell lysate
F3Genotype:ATP13A2 KO | Treatment:none | Sample source:HAP1 | Sample Type:lysosome
F4Genotype:ATP13A2 KO | Treatment:none | Sample source:HAP1 | Sample Type:whole cell lysate
F5Genotype:ATP13A2 KO | Treatment:PBS | Sample source:HAP1 | Sample Type:whole cell lysate
F6Genotype:ATP13A2 KO | Treatment:Rim | Sample source:HAP1 | Sample Type:whole cell lysate
F7Genotype:ATP13A2 KO | Treatment:SPM + 22 6 PG | Sample source:HAP1 | Sample Type:whole cell lysate
F8Genotype:ATP13A2 KO | Treatment:SPM + DOPC | Sample source:HAP1 | Sample Type:whole cell lysate
F9Genotype:ATP13A2 KO | Treatment:SPM + Rim | Sample source:HAP1 | Sample Type:whole cell lysate
F10Genotype:ATP13A2 KO | Treatment:SPM | Sample source:HAP1 | Sample Type:whole cell lysate
F11Genotype:NA | Treatment:NA | Sample source:HAP1 | Sample Type:lysosome
F12Genotype:NA | Treatment:NA | Sample source:HAP1 | Sample Type:whole cell lysate
F13Genotype:WT | Treatment:22 6 PG | Sample source:HAP1 | Sample Type:whole cell lysate
F14Genotype:WT | Treatment:DOPC | Sample source:HAP1 | Sample Type:whole cell lysate
F15Genotype:WT | Treatment:none | Sample source:HAP1 | Sample Type:lysosome
F16Genotype:WT | Treatment:none | Sample source:HAP1 | Sample Type:whole cell lysate
F17Genotype:WT | Treatment:PBS | Sample source:HAP1 | Sample Type:whole cell lysate
F18Genotype:WT | Treatment:Rim | Sample source:HAP1 | Sample Type:whole cell lysate
F19Genotype:WT | Treatment:SPM + 22 6 PG | Sample source:HAP1 | Sample Type:whole cell lysate
F20Genotype:WT | Treatment:SPM + DOPC | Sample source:HAP1 | Sample Type:whole cell lysate
F21Genotype:WT | Treatment:SPM + Rim | Sample source:HAP1 | Sample Type:whole cell lysate
F22Genotype:WT | Treatment:SPM | Sample source:HAP1 | Sample Type:whole cell lysate
Data matrix
  logo