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Clustering data with heatmap algorithm for (Study ST004239)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Sample source:free parasites \| Parasite_type:Saponin \| Parasite_line:Dd2 \| Timepoint:0.5 h
F2	Sample source:free parasites \| Parasite_type:Saponin \| Parasite_line:Dd2 \| Timepoint:0 h
F3	Sample source:free parasites \| Parasite_type:Saponin \| Parasite_line:Dd2 \| Timepoint:10 h
F4	Sample source:free parasites \| Parasite_type:Saponin \| Parasite_line:Dd2 \| Timepoint:1 h
F5	Sample source:free parasites \| Parasite_type:Saponin \| Parasite_line:Dd2 \| Timepoint:2 h
F6	Sample source:free parasites \| Parasite_type:Saponin \| Parasite_line:Dd2 \| Timepoint:6 h
F7	Sample source:infected RBC (iRBC) \| Parasite_type:iRBC \| Parasite_line:Dd2 \| Timepoint:0.5 h
F8	Sample source:infected RBC (iRBC) \| Parasite_type:iRBC \| Parasite_line:Dd2 \| Timepoint:0 h
F9	Sample source:infected RBC (iRBC) \| Parasite_type:iRBC \| Parasite_line:Dd2 \| Timepoint:10 h
F10	Sample source:infected RBC (iRBC) \| Parasite_type:iRBC \| Parasite_line:Dd2 \| Timepoint:1 h
F11	Sample source:infected RBC (iRBC) \| Parasite_type:iRBC \| Parasite_line:Dd2 \| Timepoint:2 h
F12	Sample source:infected RBC (iRBC) \| Parasite_type:iRBC \| Parasite_line:Dd2 \| Timepoint:6 h
F13	Sample source:uninfected RBC (uRBC) \| Parasite_type:uninfected RBCs \| Parasite_line:Control RBCs \| Timepoint:0.5 h
F14	Sample source:uninfected RBC (uRBC) \| Parasite_type:uninfected RBCs \| Parasite_line:Control RBCs \| Timepoint:0 h
F15	Sample source:uninfected RBC (uRBC) \| Parasite_type:uninfected RBCs \| Parasite_line:Control RBCs \| Timepoint:10 h
F16	Sample source:uninfected RBC (uRBC) \| Parasite_type:uninfected RBCs \| Parasite_line:Control RBCs \| Timepoint:1 h
F17	Sample source:uninfected RBC (uRBC) \| Parasite_type:uninfected RBCs \| Parasite_line:Control RBCs \| Timepoint:2 h
F18	Sample source:uninfected RBC (uRBC) \| Parasite_type:uninfected RBCs \| Parasite_line:Control RBCs \| Timepoint:6 h

Data matrix