Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for Investigation of metabolomic blood biomarkers for detection of adenocarcinoma lung cancer (part II) (Study ST000369)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Organ:Plasma \| Cancer status:Adenocarcinoma \| Smoker:Current \| Gender:F
F2	Organ:Plasma \| Cancer status:Adenocarcinoma \| Smoker:Current \| Gender:M
F3	Organ:Plasma \| Cancer status:Adenocarcinoma \| Smoker:Former \| Gender:F
F4	Organ:Plasma \| Cancer status:Adenocarcinoma \| Smoker:Former \| Gender:M
F5	Organ:Plasma \| Cancer status:Adenocarcnoma \| Smoker:Former \| Gender:F
F6	Organ:Plasma \| Cancer status:Adenosquamous \| Smoker:Current \| Gender:F
F7	Organ:Plasma \| Cancer status:Adenosquamous \| Smoker:Current \| Gender:M
F8	Organ:Plasma \| Cancer status:Adenosquamous \| Smoker:Former \| Gender:M
F9	Organ:Plasma \| Cancer status:Healthy \| Smoker:Current \| Gender:F
F10	Organ:Plasma \| Cancer status:Healthy \| Smoker:Current \| Gender:M
F11	Organ:Plasma \| Cancer status:Healthy \| Smoker:Former \| Gender:F
F12	Organ:Plasma \| Cancer status:Healthy \| Smoker:Former \| Gender:M
F13	Organ:Plasma \| Cancer status:NA \| Smoker:NA \| Gender:NA
F14	Organ:Serum \| Cancer status:Adenocarcinoma \| Smoker:Current \| Gender:F
F15	Organ:Serum \| Cancer status:Adenocarcinoma \| Smoker:Current \| Gender:M
F16	Organ:Serum \| Cancer status:Adenocarcinoma \| Smoker:Former \| Gender:F
F17	Organ:Serum \| Cancer status:Adenocarcinoma \| Smoker:Former \| Gender:M
F18	Organ:Serum \| Cancer status:Adenocarcnoma \| Smoker:Former \| Gender:F
F19	Organ:Serum \| Cancer status:Adenocarcnoma \| Smoker:Former \| Gender:M
F20	Organ:Serum \| Cancer status:Adenosquamous \| Smoker:Current \| Gender:F
F21	Organ:Serum \| Cancer status:Adenosquamous \| Smoker:Current \| Gender:M
F22	Organ:Serum \| Cancer status:Adenosquamous \| Smoker:Former \| Gender:M
F23	Organ:Serum \| Cancer status:Healthy \| Smoker:Current \| Gender:F
F24	Organ:Serum \| Cancer status:Healthy \| Smoker:Current \| Gender:M
F25	Organ:Serum \| Cancer status:Healthy \| Smoker:Former \| Gender:F
F26	Organ:Serum \| Cancer status:Healthy \| Smoker:Former \| Gender:M

Data matrix