Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for Pilot metabolomics study of aromatase inhibitor associated arthralgias (Study ST000695)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Exemestane \| Race:Black \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:N
F2	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Exemestane \| Race:Black \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:N
F3	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:N
F4	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:N
F5	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:N
F6	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:N
F7	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Letrozole \| Race:Black \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:N
F8	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Letrozole \| Race:Black \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:N
F9	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Letrozole \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:N
F10	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Letrozole \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:N
F11	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Letrozole \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:N
F12	CASE_CONTROL:Case \| Chemotherapy:N \| Drug:Letrozole \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:N
F13	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Exemestane \| Race:Black \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:Y
F14	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Exemestane \| Race:Black \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:Y
F15	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:Y
F16	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:N
F17	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:Y
F18	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:Y
F19	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:N
F20	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:Y
F21	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Letrozole \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:Y
F22	CASE_CONTROL:Case \| Chemotherapy:Y \| Drug:Letrozole \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:Y
F23	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Exemestane \| Race:Black \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:N
F24	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Exemestane \| Race:Black \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:N
F25	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:N
F26	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:N
F27	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:N
F28	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:N
F29	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Letrozole \| Race:Black \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:N
F30	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Letrozole \| Race:Black \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:N
F31	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Letrozole \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:N
F32	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Letrozole \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:N
F33	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Letrozole \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:N
F34	CASE_CONTROL:Control \| Chemotherapy:N \| Drug:Letrozole \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:N
F35	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:N
F36	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:N \| Taxane:Y
F37	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:N
F38	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:Y
F39	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:N
F40	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:N \| Taxane:Y
F41	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:N
F42	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Exemestane \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:Y
F43	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Letrozole \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:N
F44	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Letrozole \| Race:White \| TIMEPOINT:3 Month \| Tamoxyfen:Y \| Taxane:Y
F45	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Letrozole \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:N
F46	CASE_CONTROL:Control \| Chemotherapy:Y \| Drug:Letrozole \| Race:White \| TIMEPOINT:Baseline \| Tamoxyfen:Y \| Taxane:Y
F47	CASE_CONTROL:POOLED \| Chemotherapy:POOLED \| Drug:POOLED \| Race:POOLED \| TIMEPOINT:POOLED \| Tamoxyfen:- \| Taxane:-

Data matrix