Clustering data with heatmap algorithm for Microbial ecology of nontuberculous mycobacteria (NTM) in cystic fibrosis (CF) sputum (Study ST000711)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	M. abscessus:no | NTM pulmonary disease:no | pre-infection sample:no
F2	M. abscessus:no | NTM pulmonary disease:no | pre-infection sample:yes
F3	M. abscessus:no | NTM pulmonary disease:yes | pre-infection sample:no
F4	M. abscessus:no | NTM pulmonary disease:yes | pre-infection sample:yes
F5	M. abscessus:yes | NTM pulmonary disease:yes | pre-infection sample:no
F6	M. abscessus:yes | NTM pulmonary disease:yes | pre-infection sample:yes

Data matrix