Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for Polycystic Ovarian Syndrome(PCOS) metabolomics (Study ST000726)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	AGE:12 \| Assay:BC TP \| DISEASE_STATE:Control \| Timepoint:-
F2	AGE:12 \| Assay:BC TP \| DISEASE_STATE:Control \| Timepoint:270
F3	AGE:12 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:-
F4	AGE:12 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:270
F5	AGE:12 \| Assay:OGTT \| DISEASE_STATE:Control \| Timepoint:-
F6	AGE:12 \| Assay:OGTT \| DISEASE_STATE:Control \| Timepoint:120
F7	AGE:12 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:-
F8	AGE:12 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:120
F9	AGE:13 \| Assay:BC TP \| DISEASE_STATE:Control \| Timepoint:-
F10	AGE:13 \| Assay:BC TP \| DISEASE_STATE:Control \| Timepoint:270
F11	AGE:13 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:-
F12	AGE:13 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:270
F13	AGE:13 \| Assay:OGTT \| DISEASE_STATE:Control \| Timepoint:-
F14	AGE:13 \| Assay:OGTT \| DISEASE_STATE:Control \| Timepoint:120
F15	AGE:13 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:-
F16	AGE:13 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:120
F17	AGE:14 \| Assay:BC TP \| DISEASE_STATE:Control \| Timepoint:-
F18	AGE:14 \| Assay:BC TP \| DISEASE_STATE:Control \| Timepoint:270
F19	AGE:14 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:-
F20	AGE:14 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:270
F21	AGE:14 \| Assay:OGTT \| DISEASE_STATE:Control \| Timepoint:-
F22	AGE:14 \| Assay:OGTT \| DISEASE_STATE:Control \| Timepoint:120
F23	AGE:15 \| Assay:BC TP \| DISEASE_STATE:Control \| Timepoint:-
F24	AGE:15 \| Assay:BC TP \| DISEASE_STATE:Control \| Timepoint:270
F25	AGE:15 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:-
F26	AGE:15 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:270
F27	AGE:15 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:-
F28	AGE:15 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:120
F29	AGE:15 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:30
F30	AGE:15 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:90
F31	AGE:16 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:-
F32	AGE:16 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:270
F33	AGE:16 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:-
F34	AGE:16 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:120
F35	AGE:17 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:-
F36	AGE:17 \| Assay:BC TP \| DISEASE_STATE:PCOS \| Timepoint:270
F37	AGE:17 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:-
F38	AGE:17 \| Assay:OGTT \| DISEASE_STATE:PCOS \| Timepoint:120

Data matrix