Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for Integrated nutrigenomic and metabolomic analysis of Africans with variable diet (Study ST000818)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Categorization:Amhara \| Country:Ethiopia \| Ethnicity:Amhara \| Occupation:Agriculturalist \| Sex:F
F2	Categorization:Amhara \| Country:Ethiopia \| Ethnicity:Amhara \| Occupation:Agriculturalist \| Sex:M
F3	Categorization:Dizi \| Country:Ethiopia \| Ethnicity:Dizi \| Occupation:Agropastoralist \| Sex:F
F4	Categorization:Dizi \| Country:Ethiopia \| Ethnicity:Dizi \| Occupation:Agropastoralist \| Sex:M
F5	Categorization:Hadza_settled \| Country:Tanzania \| Ethnicity:Hadza \| Occupation:Hunter-Gatherer \| Sex:F
F6	Categorization:Hadza_settled \| Country:Tanzania \| Ethnicity:Hadza \| Occupation:Hunter-Gatherer \| Sex:M
F7	Categorization:Hadza_traditional \| Country:Tanzania \| Ethnicity:Hadza \| Occupation:Hunter-Gatherer \| Sex:F
F8	Categorization:Hadza_traditional \| Country:Tanzania \| Ethnicity:Hadza \| Occupation:Hunter-Gatherer \| Sex:M
F9	Categorization:Hadza_traditional \| Country:Tanzania \| Ethnicity:Hadza \| Occupation:Hunter-Gatherer \| Sex:nan
F10	Categorization:Hamer \| Country:Ethiopia \| Ethnicity:Hamer \| Occupation:Pastoralist \| Sex:F
F11	Categorization:Hamer \| Country:Ethiopia \| Ethnicity:Hamer \| Occupation:Pastoralist \| Sex:M
F12	Categorization:Herero \| Country:Botswana \| Ethnicity:Herero/Na \| Occupation:Pastoralist \| Sex:F
F13	Categorization:Herero \| Country:Botswana \| Ethnicity:Herero \| Occupation:Pastoralist \| Sex:F
F14	Categorization:Herero \| Country:Botswana \| Ethnicity:Herero \| Occupation:Pastoralist \| Sex:M
F15	Categorization:Ju \| Country:Botswana \| Ethnicity:Ju\|Hoan \| Occupation:Hunter-Gatherer \| Sex:F
F16	Categorization:Ju \| Country:Botswana \| Ethnicity:Ju\|Hoan \| Occupation:Hunter-Gatherer \| Sex:M
F17	Categorization:Ju \| Country:Botswana \| Ethnicity:Ju\|Hoan/!Xoo \| Occupation:Hunter-Gatherer \| Sex:F
F18	Categorization:Ju \| Country:Botswana \| Ethnicity:Ju\|Hoan/!Xoo \| Occupation:Hunter-Gatherer \| Sex:M
F19	Categorization:Ju \| Country:Botswana \| Ethnicity:Kaukau/Ju\|Hoan \| Occupation:Hunter-Gatherer \| Sex:M
F20	Categorization:Ju \| Country:Botswana \| Ethnicity:Kaukau/Naro \| Occupation:Hunter-Gatherer \| Sex:M
F21	Categorization:Ju \| Country:Botswana \| Ethnicity:Kaukau \| Occupation:Hunter-Gatherer \| Sex:F
F22	Categorization:Ju \| Country:Botswana \| Ethnicity:Kaukau \| Occupation:Hunter-Gatherer \| Sex:M
F23	Categorization:Ju \| Country:Botswana \| Ethnicity:Kaukau/Tsoa/Naro/Na \| Occupation:Hunter-Gatherer \| Sex:M
F24	Categorization:Ju \| Country:Botswana \| Ethnicity:Kaukau/Tsoa \| Occupation:Hunter-Gatherer \| Sex:M
F25	Categorization:Ju \| Country:Botswana \| Ethnicity:Kaukau/Tswana \| Occupation:Hunter-Gatherer \| Sex:F
F26	Categorization:Ju \| Country:Botswana \| Ethnicity:Naro/Kaukau/Nama/Na \| Occupation:Hunter-Gatherer \| Sex:M
F27	Categorization:Ju \| Country:Botswana \| Ethnicity:Naro/Kaukau \| Occupation:Hunter-Gatherer \| Sex:F
F28	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Kgalagadi/Tswana \| Occupation:Agropastoralist \| Sex:F
F29	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Mbukushu \| Occupation:Agropastoralist \| Sex:F
F30	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Mbukushu \| Occupation:Agropastoralist \| Sex:M
F31	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Tswana/Herero \| Occupation:Agropastoralist \| Sex:F
F32	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Tswana/Na \| Occupation:Agropastoralist \| Sex:F
F33	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Tswana/Na \| Occupation:Agropastoralist \| Sex:M
F34	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Tswana \| Occupation:Agropastoralist \| Sex:F
F35	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Tswana \| Occupation:Agropastoralist \| Sex:M
F36	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Yeyi \| Occupation:Agropastoralist \| Sex:F
F37	Categorization:Mb_Ts_Ye \| Country:Botswana \| Ethnicity:Yeyi \| Occupation:Agropastoralist \| Sex:M
F38	Categorization:Mursi \| Country:Ethiopia \| Ethnicity:Mursi \| Occupation:Pastoralist \| Sex:F
F39	Categorization:Mursi \| Country:Ethiopia \| Ethnicity:Mursi \| Occupation:Pastoralist \| Sex:M
F40	Categorization:Naro \| Country:Botswana \| Ethnicity:Naro \| Occupation:Hunter-Gatherer \| Sex:F
F41	Categorization:Naro \| Country:Botswana \| Ethnicity:Naro \| Occupation:Hunter-Gatherer \| Sex:M
F42	Categorization:Qimant \| Country:Ethiopia \| Ethnicity:Qimant \| Occupation:Agropastoralist \| Sex:F
F43	Categorization:Qimant \| Country:Ethiopia \| Ethnicity:Qimant \| Occupation:Agropastoralist \| Sex:M
F44	Categorization:Sabue \| Country:Ethiopia \| Ethnicity:Sabue \| Occupation:Hunter-Gatherer \| Sex:F
F45	Categorization:Sabue \| Country:Ethiopia \| Ethnicity:Sabue \| Occupation:Hunter-Gatherer \| Sex:M
F46	Categorization:Sandawe \| Country:Tanzania \| Ethnicity:Sandawe \| Occupation:Hunter-Gatherer \| Sex:F
F47	Categorization:Sandawe \| Country:Tanzania \| Ethnicity:Sandawe \| Occupation:Hunter-Gatherer \| Sex:M
F48	Categorization:Weyto \| Country:Ethiopia \| Ethnicity:Weyto \| Occupation:Hunter-Gatherer \| Sex:F
F49	Categorization:Weyto \| Country:Ethiopia \| Ethnicity:Weyto \| Occupation:Hunter-Gatherer \| Sex:M
F50	Categorization:!Xoo \| Country:Botswana \| Ethnicity:!Xoo \| Occupation:Hunter-Gatherer \| Sex:F
F51	Categorization:!Xoo \| Country:Botswana \| Ethnicity:!Xoo \| Occupation:Hunter-Gatherer \| Sex:M

Data matrix