Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for Cancer Cell Line Encyclopedia Metabolomics (Study ST001142)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Classifications:AML \| Cell Culture Media:AMEM + 20% FBS
F2	Classifications:AML \| Cell Culture Media:IMDM + 10% FBS
F3	Classifications:AML \| Cell Culture Media:IMDM + 20% FBS
F4	Classifications:AML \| Cell Culture Media:IMDM + 5% FBS
F5	Classifications:AML \| Cell Culture Media:MEM + 10% FBS
F6	Classifications:AML \| Cell Culture Media:RPMI 1640 + 10% FBS
F7	Classifications:AML \| Cell Culture Media:RPMI 1640 + 15% FBS
F8	Classifications:AML \| Cell Culture Media:RPMI 1640 + 20% FBS
F9	Classifications:B-cell_ALL \| Cell Culture Media:IMDM + 10% FBS
F10	Classifications:B-cell_ALL \| Cell Culture Media:IMDM + 20% FBS
F11	Classifications:B-cell_ALL \| Cell Culture Media:RPMI 1640 + 10% FBS
F12	Classifications:B-cell_ALL \| Cell Culture Media:RPMI 1640 + 20% FBS
F13	Classifications:B-cell_lymphoma_other \| Cell Culture Media:DMEM + 10% FBS
F14	Classifications:B-cell_lymphoma_other \| Cell Culture Media:DMEM + 20% FBS
F15	Classifications:B-cell_lymphoma_other \| Cell Culture Media:IMDM + 10% FBS
F16	Classifications:B-cell_lymphoma_other \| Cell Culture Media:RPMI 1640 + 10% FBS
F17	Classifications:B-cell_lymphoma_other \| Cell Culture Media:RPMI 1640 + 15% FBS
F18	Classifications:B-cell_lymphoma_other \| Cell Culture Media:RPMI 1640 + 20% FBS
F19	Classifications:bile_duct \| Cell Culture Media:RPMI 1640 + 10% FBS
F20	Classifications:breast \| Cell Culture Media:DMEM + 10% FBS
F21	Classifications:breast \| Cell Culture Media:DMEM + 20% FBS
F22	Classifications:breast \| Cell Culture Media:EMEM + 10% FBS
F23	Classifications:breast \| Cell Culture Media:Leibovitzs L-15 + 10% FBS
F24	Classifications:breast \| Cell Culture Media:Leibovitzs L-15 + 20% FBS
F25	Classifications:breast \| Cell Culture Media:McCoys 5A + 10% FBS
F26	Classifications:breast \| Cell Culture Media:RPMI 1640 + 10% FBS
F27	Classifications:breast \| Cell Culture Media:RPMI 1640 + 15% FBS
F28	Classifications:breast \| Cell Culture Media:RPMI 1640 + 20% FBS
F29	Classifications:chondrosarcoma \| Cell Culture Media:DMEM + 10% FBS
F30	Classifications:chondrosarcoma \| Cell Culture Media:RPMI 1640 + 10% FBS
F31	Classifications:chondrosarcoma \| Cell Culture Media:RPMI 1640 + 20% FBS
F32	Classifications:CML \| Cell Culture Media:RPMI 1640 + 10% FBS
F33	Classifications:CML \| Cell Culture Media:RPMI 1640 + 20% FBS
F34	Classifications:colorectal \| Cell Culture Media:DMEM + 10% FBS
F35	Classifications:colorectal \| Cell Culture Media:DMEM + 15% FBS
F36	Classifications:colorectal \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F37	Classifications:colorectal \| Cell Culture Media:DMEM;F12 = 1;1 + 20% FBS
F38	Classifications:colorectal \| Cell Culture Media:DMEM;F12 = 1;1 + 5% FBS
F39	Classifications:colorectal \| Cell Culture Media:EMEM + 10% FBS
F40	Classifications:colorectal \| Cell Culture Media:EMEM + 20% FBS
F41	Classifications:colorectal \| Cell Culture Media:F12K + 10% FBS
F42	Classifications:colorectal \| Cell Culture Media:Leibovitzs L-15 + 10% FBS
F43	Classifications:colorectal \| Cell Culture Media:McCoys 5A + 10% FBS
F44	Classifications:colorectal \| Cell Culture Media:RPMI 1640 + 10% FBS
F45	Classifications:colorectal \| Cell Culture Media:RPMI;F12 = 1;1 + 10% FBS
F46	Classifications:endometrium \| Cell Culture Media:DMEM + 20% FBS
F47	Classifications:endometrium \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F48	Classifications:endometrium \| Cell Culture Media:DMEM;F12 = 1;1 + 15% FBS
F49	Classifications:endometrium \| Cell Culture Media:EMEM + 10% FBS
F50	Classifications:endometrium \| Cell Culture Media:EMEM + 15% FBS
F51	Classifications:endometrium \| Cell Culture Media:F12 + 20% FBS
F52	Classifications:endometrium \| Cell Culture Media:McCoys 5A + 10% FBS
F53	Classifications:endometrium \| Cell Culture Media:MEM + 10% FBS
F54	Classifications:endometrium \| Cell Culture Media:RPMI 1640 + 10% FBS
F55	Classifications:endometrium \| Cell Culture Media:RPMI 1640 + 20% FBS
F56	Classifications:endometrium \| Cell Culture Media:RPMI;MEM = 1;1 + 20% FBS
F57	Classifications:esophagus \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F58	Classifications:esophagus \| Cell Culture Media:F12 + 20% FBS
F59	Classifications:esophagus \| Cell Culture Media:RPMI 1640 + 10% FBS
F60	Classifications:esophagus \| Cell Culture Media:RPMI;F12 = 1;1 + 10% FBS
F61	Classifications:esophagus \| Cell Culture Media:RPMI;F12 = 1;1 + 5% FBS
F62	Classifications:Ewings_sarcoma \| Cell Culture Media:DMEM + 10% FBS
F63	Classifications:Ewings_sarcoma \| Cell Culture Media:EMEM + 10% FBS
F64	Classifications:Ewings_sarcoma \| Cell Culture Media:IMDM + 10% FBS
F65	Classifications:Ewings_sarcoma \| Cell Culture Media:McCoys 5A + 15% FBS
F66	Classifications:Ewings_sarcoma \| Cell Culture Media:RPMI 1640 + 10% FBS
F67	Classifications:Ewings_sarcoma \| Cell Culture Media:RPMI 1640 + 15% FBS
F68	Classifications:giant_cell_tumour \| Cell Culture Media:DMEM + 10% FBS
F69	Classifications:glioma \| Cell Culture Media:DMEM + 10% FBS
F70	Classifications:glioma \| Cell Culture Media:DMEM + 15% FBS
F71	Classifications:glioma \| Cell Culture Media:DMEM + 20% FBS
F72	Classifications:glioma \| Cell Culture Media:DMEM + 5% FBS
F73	Classifications:glioma \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F74	Classifications:glioma \| Cell Culture Media:EMEM + 10% FBS
F75	Classifications:glioma \| Cell Culture Media:EMEM + 20% FBS
F76	Classifications:glioma \| Cell Culture Media:EMEM + 5% FBS
F77	Classifications:glioma \| Cell Culture Media:MEM + 10% FBS
F78	Classifications:glioma \| Cell Culture Media:RPMI 1640 + 10% FBS
F79	Classifications:glioma \| Cell Culture Media:RPMI 1640 + 5% FBS
F80	Classifications:glioma \| Cell Culture Media:RPMI;EMEM = 1;1 + 20% FBS
F81	Classifications:kidney \| Cell Culture Media:DMEM + 10% FBS
F82	Classifications:kidney \| Cell Culture Media:DMEM + 15% FBS
F83	Classifications:kidney \| Cell Culture Media:EMEM + 10% FBS
F84	Classifications:kidney \| Cell Culture Media:McCoys 5A + 10% FBS
F85	Classifications:kidney \| Cell Culture Media:MEM + 10% FBS
F86	Classifications:kidney \| Cell Culture Media:RPMI 1640 + 10% FBS
F87	Classifications:kidney \| Cell Culture Media:RPMI 1640 + 5% FBS
F88	Classifications:leukemia_other \| Cell Culture Media:RPMI 1640 + 10% FBS
F89	Classifications:leukemia_other \| Cell Culture Media:RPMI 1640 + 15% FBS
F90	Classifications:liver \| Cell Culture Media:DMEM + 10% FBS
F91	Classifications:liver \| Cell Culture Media:DMEM + 5% FBS
F92	Classifications:liver \| Cell Culture Media:EMEM + 10% FBS
F93	Classifications:liver \| Cell Culture Media:RPMI 1640 + 10% FBS
F94	Classifications:liver \| Cell Culture Media:Williams E Medium + 10% FBS
F95	Classifications:lung_NSC \| Cell Culture Media:DMEM + 10% FBS
F96	Classifications:lung_NSC \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F97	Classifications:lung_NSC \| Cell Culture Media:DMEM;F12 = 1;1 + 5% FBS
F98	Classifications:lung_NSC \| Cell Culture Media:EMEM + 10% FBS
F99	Classifications:lung_NSC \| Cell Culture Media:EMEM + 20% FBS
F100	Classifications:lung_NSC \| Cell Culture Media:F10 + 10% FBS
F101	Classifications:lung_NSC \| Cell Culture Media:F12 + 10% FBS
F102	Classifications:lung_NSC \| Cell Culture Media:Leibovitzs L-15 + 10% FBS
F103	Classifications:lung_NSC \| Cell Culture Media:McCoys 5A + 10% FBS
F104	Classifications:lung_NSC \| Cell Culture Media:MEM + 10% FBS
F105	Classifications:lung_NSC \| Cell Culture Media:RPMI 1640 + 10% FBS
F106	Classifications:lung_NSC \| Cell Culture Media:RPMI 1640 + 20% FBS
F107	Classifications:lung_NSC \| Cell Culture Media:RPMI 1640 + 5% FBS
F108	Classifications:lung_small_cell \| Cell Culture Media:DMEM + 10% FBS
F109	Classifications:lung_small_cell \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F110	Classifications:lung_small_cell \| Cell Culture Media:DMEM;F12 = 1;1 + 5% FBS
F111	Classifications:lung_small_cell \| Cell Culture Media:EMEM + 10% FBS
F112	Classifications:lung_small_cell \| Cell Culture Media:F12K + 10% FBS
F113	Classifications:lung_small_cell \| Cell Culture Media:Leibovitzs L-15 + 10% FBS
F114	Classifications:lung_small_cell \| Cell Culture Media:RPMI 1640 + 10% FBS
F115	Classifications:lung_small_cell \| Cell Culture Media:RPMI 1640 + 20% FBS
F116	Classifications:lung_small_cell \| Cell Culture Media:RPMI 1640 + 5% FBS
F117	Classifications:lung_small_cell \| Cell Culture Media:Waymouth MB 7521 medium+ 10% FBS
F118	Classifications:lymphoma_Burkitt \| Cell Culture Media:RPMI 1640 + 10% FBS
F119	Classifications:lymphoma_Burkitt \| Cell Culture Media:RPMI 1640 + 20% FBS
F120	Classifications:lymphoma_DLBCL \| Cell Culture Media:AMEM + 20% FBS
F121	Classifications:lymphoma_DLBCL \| Cell Culture Media:RPMI 1640 + 10% FBS
F122	Classifications:lymphoma_DLBCL \| Cell Culture Media:RPMI 1640 + 20% FBS
F123	Classifications:lymphoma_Hodgkin \| Cell Culture Media:DMEM + 10% FBS
F124	Classifications:lymphoma_Hodgkin \| Cell Culture Media:RPMI 1640 + 10% FBS
F125	Classifications:lymphoma_Hodgkin \| Cell Culture Media:RPMI 1640 + 20% FBS
F126	Classifications:medulloblastoma \| Cell Culture Media:DMEM + 10% FBS
F127	Classifications:medulloblastoma \| Cell Culture Media:EMEM + 10% FBS
F128	Classifications:medulloblastoma \| Cell Culture Media:EMEM + 20% FBS
F129	Classifications:medulloblastoma \| Cell Culture Media:RPMI 1640 + 10% FBS
F130	Classifications:melanoma \| Cell Culture Media:DMEM + 10% FBS
F131	Classifications:melanoma \| Cell Culture Media:DMEM + 15% FBS
F132	Classifications:melanoma \| Cell Culture Media:EMEM + 10% FBS
F133	Classifications:melanoma \| Cell Culture Media:F10 + 10% FBS
F134	Classifications:melanoma \| Cell Culture Media:IMDM + 20% FBS
F135	Classifications:melanoma \| Cell Culture Media:McCoys 5A + 10% FBS
F136	Classifications:melanoma \| Cell Culture Media:McCoys 5A + 15% FBS
F137	Classifications:melanoma \| Cell Culture Media:RPMI 1640 + 10% FBS
F138	Classifications:melanoma \| Cell Culture Media:RPMI 1640 + 15% FBS
F139	Classifications:mesothelioma \| Cell Culture Media:DMEM + 10% FBS
F140	Classifications:mesothelioma \| Cell Culture Media:RPMI 1640 + 10% FBS
F141	Classifications:multiple_myeloma \| Cell Culture Media:DMEM;IMDM = 1;1 + 20% FBS
F142	Classifications:multiple_myeloma \| Cell Culture Media:IMDM + 20% FBS
F143	Classifications:multiple_myeloma \| Cell Culture Media:RPMI 1640 + 10% FBS
F144	Classifications:multiple_myeloma \| Cell Culture Media:RPMI 1640 + 15% FBS
F145	Classifications:multiple_myeloma \| Cell Culture Media:RPMI 1640 + 20% FBS
F146	Classifications:neuroblastoma \| Cell Culture Media:AMEM + 10% FBS
F147	Classifications:neuroblastoma \| Cell Culture Media:DMEM + 10% FBS
F148	Classifications:neuroblastoma \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F149	Classifications:neuroblastoma \| Cell Culture Media:EMEM + 10% FBS
F150	Classifications:neuroblastoma \| Cell Culture Media:EMEM;F12 = 1;1 + 10% FBS
F151	Classifications:neuroblastoma \| Cell Culture Media:RPMI 1640 + 10% FBS
F152	Classifications:neuroblastoma \| Cell Culture Media:RPMI 1640 + 20% FBS
F153	Classifications:osteosarcoma \| Cell Culture Media:DMEM + 10% FBS
F154	Classifications:osteosarcoma \| Cell Culture Media:EMEM + 10% FBS
F155	Classifications:osteosarcoma \| Cell Culture Media:McCoys 5A + 10% FBS
F156	Classifications:osteosarcoma \| Cell Culture Media:McCoys 5A + 15% FBS
F157	Classifications:osteosarcoma \| Cell Culture Media:MEM + 10% FBS
F158	Classifications:osteosarcoma \| Cell Culture Media:RPMI 1640 + 10% FBS
F159	Classifications:other \| Cell Culture Media:McCoys 5A + 10% FBS
F160	Classifications:other \| Cell Culture Media:RPMI 1640 + 10% FBS
F161	Classifications:ovary \| Cell Culture Media:DMEM + 10% FBS
F162	Classifications:ovary \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F163	Classifications:ovary \| Cell Culture Media:DMEM;F12 = 1;1 + 5% FBS
F164	Classifications:ovary \| Cell Culture Media:EMEM + 10% FBS
F165	Classifications:ovary \| Cell Culture Media:EMEM + 20% FBS
F166	Classifications:ovary \| Cell Culture Media:F12 + 10% FBS
F167	Classifications:ovary \| Cell Culture Media:McCoys 5A + 10% FBS
F168	Classifications:ovary \| Cell Culture Media:MCDB 105;Medium 199 = 1;1 + 10% FBS
F169	Classifications:ovary \| Cell Culture Media:MCDB 105;Medium 199 = 1;1 + 15% FBS
F170	Classifications:ovary \| Cell Culture Media:MEM + 10% FBS
F171	Classifications:ovary \| Cell Culture Media:RPMI 1640 + 10% FBS
F172	Classifications:ovary \| Cell Culture Media:RPMI 1640 + 20% FBS
F173	Classifications:ovary \| Cell Culture Media:RPMI 1640 + 5% FBS
F174	Classifications:pancreas \| Cell Culture Media:DMEM + 10% FBS
F175	Classifications:pancreas \| Cell Culture Media:DMEM;F12 = 1;1 + 5% FBS
F176	Classifications:pancreas \| Cell Culture Media:EMEM + 10% FBS
F177	Classifications:pancreas \| Cell Culture Media:F10 + 10% FBS
F178	Classifications:pancreas \| Cell Culture Media:IMDM + 10% FBS
F179	Classifications:pancreas \| Cell Culture Media:IMDM + 20% FBS
F180	Classifications:pancreas \| Cell Culture Media:McCoys 5A + 10% FBS
F181	Classifications:pancreas \| Cell Culture Media:MEM + 10% FBS
F182	Classifications:pancreas \| Cell Culture Media:RPMI 1640 + 10% FBS
F183	Classifications:pancreas \| Cell Culture Media:RPMI 1640 + 15% FBS
F184	Classifications:prostate \| Cell Culture Media:DMEM + 10% FBS
F185	Classifications:prostate \| Cell Culture Media:EMEM + 10% FBS
F186	Classifications:prostate \| Cell Culture Media:F12 + 10% FBS
F187	Classifications:prostate \| Cell Culture Media:F12 + 20% FBS
F188	Classifications:prostate \| Cell Culture Media:RPMI 1640 + 10% FBS
F189	Classifications:prostate \| Cell Culture Media:RPMI 1640 + 5% FBS
F190	Classifications:soft_tissue \| Cell Culture Media:DMEM + 10% FBS
F191	Classifications:soft_tissue \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F192	Classifications:soft_tissue \| Cell Culture Media:EMEM + 10% FBS
F193	Classifications:soft_tissue \| Cell Culture Media:McCoys 5A + 10% FBS
F194	Classifications:soft_tissue \| Cell Culture Media:RPMI 1640 + 10% FBS
F195	Classifications:soft_tissue \| Cell Culture Media:RPMI 1640 + 20% FBS
F196	Classifications:stomach \| Cell Culture Media:DMEM + 10% FBS
F197	Classifications:stomach \| Cell Culture Media:DMEM + 5% FBS
F198	Classifications:stomach \| Cell Culture Media:F10 + 10% FBS
F199	Classifications:stomach \| Cell Culture Media:F12K + 10% FBS
F200	Classifications:stomach \| Cell Culture Media:IMDM + 20% FBS
F201	Classifications:stomach \| Cell Culture Media:MEM + 10% FBS
F202	Classifications:stomach \| Cell Culture Media:MEM + 15% FBS
F203	Classifications:stomach \| Cell Culture Media:RPMI 1640 + 10% FBS
F204	Classifications:stomach \| Cell Culture Media:RPMI 1640 + 15% FBS
F205	Classifications:T-cell_ALL \| Cell Culture Media:RPMI 1640 + 10% FBS
F206	Classifications:T-cell_ALL \| Cell Culture Media:RPMI 1640 + 15% FBS
F207	Classifications:T-cell_ALL \| Cell Culture Media:RPMI 1640 + 20% FBS
F208	Classifications:T-cell_lymphoma_other \| Cell Culture Media:IMDM + 20% FBS
F209	Classifications:T-cell_lymphoma_other \| Cell Culture Media:RPMI 1640 + 10% FBS
F210	Classifications:T-cell_lymphoma_other \| Cell Culture Media:RPMI 1640 + 15% FBS
F211	Classifications:T-cell_lymphoma_other \| Cell Culture Media:RPMI 1640 + 20% FBS
F212	Classifications:thyroid \| Cell Culture Media:DMEM + 10% FBS
F213	Classifications:thyroid \| Cell Culture Media:DMEM + 20% FBS
F214	Classifications:thyroid \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F215	Classifications:thyroid \| Cell Culture Media:DMEM;F12 = 1;1 + 5% FBS
F216	Classifications:thyroid \| Cell Culture Media:EMEM + 10% FBS
F217	Classifications:thyroid \| Cell Culture Media:F12K + 10% FBS
F218	Classifications:thyroid \| Cell Culture Media:RPMI 1640 + 10% FBS
F219	Classifications:thyroid \| Cell Culture Media:RPMI 1640 + 20% FBS
F220	Classifications:upper_aerodigestive \| Cell Culture Media:DMEM + 10% FBS
F221	Classifications:upper_aerodigestive \| Cell Culture Media:DMEM + 20% FBS
F222	Classifications:upper_aerodigestive \| Cell Culture Media:DMEM;F12 = 1;1 + 10% FBS
F223	Classifications:upper_aerodigestive \| Cell Culture Media:EMEM + 10% FBS
F224	Classifications:upper_aerodigestive \| Cell Culture Media:EMEM + 15% FBS
F225	Classifications:upper_aerodigestive \| Cell Culture Media:IMDM + 10% FBS
F226	Classifications:upper_aerodigestive \| Cell Culture Media:RPMI 1640 + 10% FBS
F227	Classifications:urinary_tract \| Cell Culture Media:DMEM + 10% FBS
F228	Classifications:urinary_tract \| Cell Culture Media:DMEM + 15% FBS
F229	Classifications:urinary_tract \| Cell Culture Media:DMEM;RPMI = 2;1 + 10% FBS
F230	Classifications:urinary_tract \| Cell Culture Media:EMEM + 10% FBS
F231	Classifications:urinary_tract \| Cell Culture Media:F12 + 10% FBS
F232	Classifications:urinary_tract \| Cell Culture Media:Leibovitzs L-15 + 10% FBS
F233	Classifications:urinary_tract \| Cell Culture Media:McCoys 5A + 10% FBS
F234	Classifications:urinary_tract \| Cell Culture Media:MEM + 10% FBS
F235	Classifications:urinary_tract \| Cell Culture Media:RPMI 1640 + 10% FBS

Data matrix