Clustering data with heatmap algorithm for Aromatic amino acid metabolism by the anaerobic gut bacterium Clostridium sporogenes (Study ST001606)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1host_compartment:Cecal Contents | bacterial_genotype:fldC
F2host_compartment:Cecal Contents | bacterial_genotype:WT
F3host_compartment:Feces | bacterial_genotype:fldC
F4host_compartment:Feces | bacterial_genotype:WT
F5host_compartment:Serum | bacterial_genotype:fldC
F6host_compartment:Serum | bacterial_genotype:WT
F7host_compartment:Urine | bacterial_genotype:fldC
F8host_compartment:Urine | bacterial_genotype:WT
Data matrix
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