Data for (Study ST003605)
(Analysis AN005923)Values for each metabolite have been scaled by dividing by the mean across all factors Run Hierarchial cluster analysis on this study | Run Heatmap cluster analysis on this study| Metabolite | F1 | F2 | F3 | F4 | F5 | F6 |
|---|---|---|---|---|---|---|
| 2/3-Phospho-D-glycerate | 0.7489 | 1.3071 | 0.6330 | 0.9472 | 1.7054 | 0.6583 |
| 2-Hydroxyglutarate/Citramalate | 0.4855 | 0.4905 | 0.7804 | 1.1407 | 0.8304 | 2.2725 |
| 2-Oxoglutarate | 0.3448 | 0.3609 | 1.1119 | 1.0450 | 0.6002 | 2.5372 |
| 2-Oxoglutarate 13C54 | 0.9464 | 0.9001 | 1.0078 | 1.1088 | 1.0417 | 0.9951 |
| 3-Methyl-2-oxobutanoic acid | 0.9380 | 0.9900 | 1.0151 | 0.9743 | 1.0353 | 1.0473 |
| (5Z-8Z-11Z-14Z-17Z)-Icosapentaenoic acid | 0.6981 | 0.8184 | 1.2409 | 0.7961 | 0.7036 | 1.7429 |
| 6-Aminohexanoate | 0.6400 | 1.5524 | 1.2484 | 0.5525 | 1.2919 | 0.7149 |
| (7Z-10Z-13Z-16Z-19Z)-Docosa-7-10-13-16-19-pentaenoic acid | 0.7165 | 0.9691 | 1.0435 | 0.9590 | 1.0817 | 1.2301 |
| (8Z-11Z-14Z)-Icosatrienoic acid | 0.6736 | 1.1980 | 0.6513 | 1.0248 | 1.3681 | 1.0843 |
| Adenine | 1.0848 | 0.7660 | 2.3330 | 0.5264 | 0.6629 | 0.6268 |
| Adenine 13C5 | 1.5362 | 1.1460 | 0.0144 | 0.5682 | 1.0768 | 0.0219 |
| Adenosine | 1.1236 | 0.6290 | 2.6288 | 0.4386 | 0.5971 | 0.5829 |
| Adenosine 13C10 | 1.2760 | 1.1705 | NA | 0.3810 | 1.1725 | NA |
| ADP | 0.7707 | 0.9297 | 1.0500 | 1.1799 | 0.8921 | 1.1777 |
| ADP 13C10 | 0.6334 | 1.3610 | 0.0254 | 0.9723 | 1.3582 | NA |
| ADP-D-ribose | 0.3583 | 1.0731 | 1.5415 | 0.6837 | 0.9656 | 1.3778 |
| alpha-D-Ribose 1-phosphate | 0.7293 | 0.9529 | 0.9602 | 0.8805 | 1.2312 | 1.2460 |
| alpha-D-Ribose 1-phosphate 13C5 | 0.7369 | 1.7309 | 0.0562 | 0.8503 | 2.5574 | 0.0683 |
| AMP | 0.7296 | 1.3256 | 1.5485 | 0.5730 | 1.0209 | 0.8024 |
| amp 13c10 | 0.4974 | 1.6358 | NA | 0.4011 | 1.4657 | NA |
| Ascorbate | 0.4458 | 0.7647 | 1.1857 | 0.7915 | 1.2706 | 1.5417 |
| Carnosine | 0.4478 | 1.7557 | 1.1145 | 0.5065 | 1.4926 | 0.6828 |
| Citrate | 1.2634 | 1.3302 | 1.1029 | 1.1032 | 0.7708 | 0.4295 |
| CMP-N-acetylneuraminate | 0.4515 | 1.1099 | 0.8200 | 0.9591 | 1.7027 | 0.9568 |
| Cytidine | 1.0556 | 1.5548 | 0.7232 | 0.7446 | 1.5243 | 0.3975 |
| Decanoic acid (caprate) | 0.9988 | 0.9869 | 0.9784 | 0.9731 | 1.0842 | 0.9785 |
| Dehydroascorbate | 0.5332 | 0.8334 | 1.4038 | 0.4061 | 1.1534 | 1.4932 |
| D-Fructose 1-6-bisphosphate | 0.6547 | 0.4138 | 0.3953 | 3.1250 | 0.9130 | 0.4982 |
| D-Glucose | 0.6778 | 1.1151 | 1.1380 | 0.8662 | 1.3155 | 0.8874 |
| D-Glucose 6-phosphate | 0.6640 | 0.5698 | 0.6947 | 1.9212 | 0.8245 | 1.3257 |
| D-Glyceraldehyde 3-phosphate/Glycerone phosphate | 1.2523 | 0.9479 | 0.9536 | 0.9857 | 0.9597 | 0.9007 |
| Diphosphate | 0.8966 | 1.2029 | 0.9792 | 0.9566 | 1.1394 | 0.8252 |
| Docosahexaenoic acid | 0.8620 | 1.2083 | 1.2495 | 0.9614 | 0.9981 | 0.7208 |
| Dodecanedioic acid | 1.1609 | 1.0033 | 1.0521 | 0.9007 | 0.9565 | 0.9265 |
| Dodecanoic acid | 0.9735 | 0.9716 | 0.9314 | 0.9447 | 0.9840 | 1.1948 |
| dTMP | 0.9078 | 1.0415 | 0.6368 | 1.2302 | 1.2651 | 0.9416 |
| Eicosatetraenoic acid | 0.8349 | 0.9424 | 0.8210 | 0.9315 | 1.1550 | 1.3151 |
| Fructose bisphosphate 13C6 | 0.8561 | 1.0861 | 1.1412 | 1.0544 | 0.9757 | 0.8865 |
| Fumarate | 0.8727 | 1.4643 | 0.6838 | 0.7504 | 1.5631 | 0.6658 |
| gamma-Glutamyl-gamma-aminobutyrate | 0.5032 | 1.7850 | 1.2733 | 0.4503 | 1.4888 | 0.4993 |
| GDP | 0.5969 | 1.1122 | 0.9064 | 1.1486 | 1.1368 | 1.0990 |
| Glutathione | 0.9940 | 1.5112 | 1.3107 | 0.5572 | 1.1287 | 0.4982 |
| Glyceraldehyde 3-phosphate 13C3 | 1.0245 | 1.1789 | 0.8288 | 1.0532 | 0.9166 | 0.9980 |
| Glycerol 3-phosphate | 0.6614 | 1.2758 | 0.6462 | 1.4146 | 1.3378 | 0.6642 |
| GMP | 0.6014 | 1.3672 | 1.2968 | 0.3616 | 1.6370 | 0.7360 |
| Heptanoic acid | 0.9530 | 0.9170 | 1.0138 | 1.0529 | 1.0414 | 1.0219 |
| Hexadecanoic acid | 1.0648 | 0.9775 | 0.9052 | 1.0315 | 1.0072 | 1.0137 |
| Hexadecenoic acid | 1.3373 | 1.0036 | 0.7822 | 1.0655 | 1.0733 | 0.7381 |
| Hexanoic acid (caproate) | 0.9768 | 0.9028 | 1.0949 | 1.0246 | 0.9747 | 1.0262 |
| Hexose phosphate 13C6 | 0.9647 | 1.0446 | 1.8105 | NA | 0.5206 | 0.7888 |
| Hypotaurine | 1.1197 | 1.3811 | 1.5666 | 0.5533 | 0.5654 | 0.8139 |
| Hypoxanthine | 0.7476 | 0.8381 | 1.0564 | 0.7975 | 1.0897 | 1.4708 |
| IDP | 0.7524 | 1.0584 | 0.8197 | 0.9847 | 1.3351 | 1.0497 |
| IMP | 1.0818 | 0.7735 | 1.2201 | 0.9552 | 0.5884 | 1.3809 |
| Inosine | 0.6219 | 0.6233 | 1.4510 | 0.4940 | 1.1774 | 1.6324 |
| Itaconate | 0.9146 | 0.6788 | 0.6941 | 1.3368 | 1.0744 | 1.3012 |
| L-4-Hydroxyglutamate semialdehyde | 1.1641 | 0.8176 | 1.0090 | 1.0589 | 0.9507 | 0.9997 |
| Lactate | 0.9710 | 0.7403 | 0.9665 | 1.4007 | 0.8230 | 1.0985 |
| L-asparagine | 0.6791 | 1.3759 | 1.0081 | 0.6087 | 1.3661 | 0.9622 |
| Linoleate | 0.9142 | 1.1572 | 0.8557 | 0.9205 | 0.9300 | 1.2223 |
| Malate | 0.9435 | 1.3875 | 0.7585 | 0.8015 | 1.4503 | 0.6586 |
| Malate 13C4 | 0.8116 | 1.9901 | 0.0215 | 0.6514 | 2.1749 | 0.0249 |
| Maltose | 0.9060 | 1.1893 | 1.1054 | 1.1635 | 0.4228 | 1.2131 |
| Mannitol | 0.6481 | 1.6535 | 1.4540 | 0.5196 | 1.0984 | 0.6263 |
| N-Acetylmethionine | 0.5495 | 1.5498 | 0.8557 | 0.5514 | 1.7092 | 0.7844 |
| N-Acetylneuraminate | 0.3448 | 0.6812 | 0.3002 | 1.4651 | 2.1775 | 1.0313 |
| N-formyl kynurenine | 0.5869 | 0.8445 | 0.6190 | 1.5186 | 1.7132 | 0.7179 |
| N-Glycoloyl-neuraminate | 0.3078 | 0.7329 | 0.3809 | 1.1954 | 1.9329 | 1.4501 |
| Nonanoic acid (pelargonate) | 0.8405 | 1.1801 | 0.8657 | 1.0014 | 1.0934 | 1.0190 |
| Octadecanoic acid | 0.7982 | 0.8599 | 1.1827 | 0.9674 | 1.1516 | 1.0403 |
| Octadecenoic acid | 0.8927 | 1.0668 | 0.7856 | 0.8496 | 1.1361 | 1.2692 |
| Oxaloacetate | 0.8797 | 1.1038 | 0.9484 | 1.0253 | 1.1535 | 0.8892 |
| Phosphate | 0.8438 | 1.0522 | 1.0529 | 1.0131 | 1.1330 | 0.9050 |
| Phosphocreatine | 1.4166 | 2.2760 | 1.8145 | 0.1709 | 0.1882 | 0.1337 |
| Phosphoenolpyruvate 13C3 | 0.2434 | 1.1450 | NA | 1.3110 | 1.0358 | 0.8791 |
| Pyruvate | 0.9195 | 0.9163 | 1.1304 | 0.9448 | 1.0511 | 1.0464 |
| Sedoheptulose 1-phosphate | 0.7306 | 0.6203 | 0.6790 | 2.0841 | 0.9862 | 0.8998 |
| Sedoheptulose 1-phosphate 13C7 | 0.9762 | 1.0168 | 0.8565 | 0.8993 | 1.2969 | 0.9542 |
| Serotonin | 2.1524 | 1.1227 | 0.3525 | 1.2188 | 0.8170 | 0.3368 |
| sn-glycero-3-Phosphoethanolamine | 1.1810 | 0.6984 | 0.3305 | 1.5222 | 1.7109 | 0.5570 |
| Succinate | 1.3576 | 1.1266 | 0.7471 | 0.6040 | 1.2869 | 0.8778 |
| Taurine | 1.0477 | 1.0685 | 1.5303 | 0.6149 | 0.6557 | 1.0829 |
| Tetradecanoic acid | 1.0271 | 0.8003 | 1.0424 | 0.9975 | 0.9993 | 1.1335 |
| Tetradecenoic acid | 1.2087 | 0.9372 | 1.0062 | 0.8359 | 1.1018 | 0.9102 |
| UDP-glucose | 0.4942 | 1.3391 | 1.5084 | 0.6569 | 1.0837 | 0.9177 |
| UDP-N-acetyl-D-glucosamine | 0.7844 | 1.2603 | 1.0975 | 0.8501 | 1.1358 | 0.8720 |
| UMP | 0.5045 | 1.2226 | 1.4981 | 0.3944 | 1.4541 | 0.9263 |
| Urate | 0.5156 | 1.2676 | 0.9295 | 0.6314 | 1.4827 | 1.1732 |
| Xanthine | 0.3708 | 0.8237 | 1.4004 | 0.5083 | 1.3136 | 1.5831 |
Factors:
| F1 | genotype:Cre RagA KO | treatment:dead bacteria | time (h):18 |
| F2 | genotype:Cre RagA KO | treatment:dead bacteria | time (h):6 |
| F3 | genotype:Cre RagA KO | treatment:none | time (h):18 |
| F4 | genotype:WT | treatment:dead bacteria | time (h):18 |
| F5 | genotype:WT | treatment:dead bacteria | time (h):6 |
| F6 | genotype:WT | treatment:none | time (h):18 |